Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0685 Trochodendron aralioides HOM05D002986 ORTHO05D007611 1.2e-58 229.6 106 100.0
TAR624G0606 Trochodendron aralioides HOM05D002986 ORTHO05D007611 4.0e-35 151.4 87 80.5
TAR624G1385 Trochodendron aralioides HOM05D002986 ORTHO05D007611 3.7e-33 144.8 79 83.5
vmacro03903 Vaccinium macrocarpon HOM05D002986 ORTHO05D007611 6.2e-28 127.5 87 65.5
Aqoxy1G00388 Aquilegia oxysepala HOM05D002986 ORTHO05D007611 1.8e-27 125.9 79 70.9
Dinv40602 Davidia involucrata HOM05D002986 ORTHO05D007611 1.2e-26 123.2 84 65.5
TWI63G1258 Tripterygium wilfordii HOM05D002986 ORTHO05D007611 3.4e-26 121.7 80 68.8
Potri.011G057900 Populus trichocarpa HOM05D002986 ORTHO05D007611 5.8e-26 120.9 81 67.9
MSTRG.7361 Avicennia marina HOM05D002986 ORTHO05D007611 9.8e-26 120.2 81 60.5
CSS0040504 Camellia sinensis var. sinensis HOM05D002986 ORTHO05D007611 9.8e-26 120.2 79 67.1
CSS0042999 Camellia sinensis var. sinensis HOM05D002986 ORTHO05D007611 9.8e-26 120.2 79 67.1
Lj7A250T23 Lonicera japonica HOM05D002986 ORTHO05D007611 9.8e-26 120.2 86 61.6
Lj7A254T21 Lonicera japonica HOM05D002986 ORTHO05D007611 9.8e-26 120.2 86 61.6
FAN12G1172 Fragaria x ananassa HOM05D002986 ORTHO05D007611 3.7e-25 118.2 80 66.2
GSVIVG01011280001 Vitis vinifera HOM05D002986 ORTHO05D007611 3.7e-25 118.2 80 67.5
Actinidia05655 Actinidia chinensis HOM05D002986 ORTHO05D007611 4.9e-25 117.9 79 65.8
Sabra11G0040100 Salix brachista HOM05D002986 ORTHO05D007611 1.1e-24 116.7 81 65.4
Nn1g06408 Nelumbo nucifera HOM05D002986 ORTHO05D007611 1.4e-24 116.3 78 66.7
Rhsim13G0180300 Rhododendron simsii HOM05D002986 ORTHO05D007611 1.9e-24 115.9 79 64.6
Phvul.010G102600 Phaseolus vulgaris HOM05D002986 ORTHO05D007611 4.1e-24 114.8 79 63.3
Haze_06370 Corylus avellana HOM05D002986 ORTHO05D007611 9.2e-24 113.6 79 64.6
FAN17G1471 Fragaria x ananassa HOM05D002986 ORTHO05D007611 9.2e-24 113.6 78 65.4
Cfa000530 Carpinus fangiana HOM05D002986 ORTHO05D007611 1.2e-23 113.2 77 66.2
FvH4_4g07830 Fragaria vesca HOM05D002986 ORTHO05D007611 1.2e-23 113.2 78 65.4
FAN07G2492 Fragaria x ananassa HOM05D002986 ORTHO05D007611 1.6e-23 112.8 78 65.4
Prupe.4G052800 Prunus persica HOM05D002986 ORTHO05D007611 1.6e-23 112.8 79 64.6
RcHm_v2.0_Chr5g0009291 Rosa chinensis HOM05D002986 ORTHO05D007611 1.6e-23 112.8 79 64.6
PGSC0003DMG401031751 Solanum tuberosum HOM05D002986 ORTHO05D007611 1.6e-23 112.8 80 61.2
TPR.G25962 Trifolium pratense HOM05D002986 ORTHO05D007611 1.6e-23 112.8 87 56.3
CAN.G529.58 Capsicum annuum HOM05D002986 ORTHO05D007611 2.0e-23 112.5 80 61.2
TPR.G11746 Trifolium pratense HOM05D002986 ORTHO05D007611 2.0e-23 112.5 81 58.0
DCAR_007997 Daucus carota HOM05D002986 ORTHO05D007611 2.7e-23 112.1 81 63.0
VMungo0331G1630 Vigna mungo HOM05D002986 ORTHO05D007611 2.7e-23 112.1 78 62.8
arahy.Tifrunner.gnm1.ann1.IL2A8L Arachis hypogaea HOM05D002986 ORTHO05D007611 6.0e-23 110.9 77 61.0
Glyma.13G235200 Glycine max HOM05D002986 ORTHO05D007611 6.0e-23 110.9 76 63.2
Peaxi162Scf00099g00032 Petunia axillaris HOM05D002986 ORTHO05D007611 7.8e-23 110.5 79 62.0
Atru.chr10.1787 Acer truncatum HOM05D002986 ORTHO05D007611 1.7e-22 109.4 79 62.0
PSO210G3062 Papaver somniferum HOM05D002986 ORTHO05D007611 1.7e-22 109.4 85 62.4
FAN16G0081 Fragaria x ananassa HOM05D002986 ORTHO05D007611 2.3e-22 109.0 78 64.1
QL05p042043 Quercus lobata HOM05D002986 ORTHO05D007611 2.3e-22 109.0 106 49.1
Nitab4.5_0017998g0010 Nicotiana tabacum HOM05D002986 ORTHO05D007611 3.0e-22 108.6 80 60.0
CiPaw.10G052700 Carya illinoinensis HOM05D002986 ORTHO05D007611 3.9e-22 108.2 79 59.5
Ciclev10015063m.g Citrus clementina HOM05D002986 ORTHO05D007611 3.9e-22 108.2 79 59.5
Psat1g202920 Pisum sativum HOM05D002986 ORTHO05D007611 3.9e-22 108.2 76 60.5
Solyc02g077650.2 Solanum lycopersicum HOM05D002986 ORTHO05D007611 3.9e-22 108.2 79 59.5
Sopen02g022550 Solanum pennellii HOM05D002986 ORTHO05D007611 3.9e-22 108.2 79 59.5
Oeu056521.1 Olea europaea HOM05D002986 ORTHO05D007611 5.0e-22 107.8 79 62.0
PSO832G1556 Papaver somniferum HOM05D002986 ORTHO05D007611 8.6e-22 107.1 82 63.4
FAN22G0034 Fragaria x ananassa HOM05D002986 ORTHO05D007611 1.1e-21 106.7 78 62.8
Lj4g0020646 Lotus japonicus HOM05D002986 ORTHO05D007611 1.5e-21 106.3 75 60.0
Migut.M01106 Erythranthe guttata HOM05D002986 ORTHO05D007611 2.5e-21 105.5 81 55.6
Manes.17G049500 Manihot esculenta HOM05D002986 ORTHO05D007611 2.5e-21 105.5 76 63.2
Nitab4.5_0001955g0120 Nicotiana tabacum HOM05D002986 ORTHO05D007611 3.3e-21 105.1 79 58.2
Medtr2g014510 Medicago truncatula HOM05D002986 ORTHO05D007611 4.3e-21 104.8 81 56.8
Lj6g0015281 Lotus japonicus HOM05D002986 ORTHO05D007611 5.6e-21 104.4 75 60.0
Sc17g0005920 Simmondsia chinensis HOM05D002986 ORTHO05D007611 1.2e-20 103.2 80 58.8
arahy.Tifrunner.gnm1.ann1.IYAJ8R Arachis hypogaea HOM05D002986 ORTHO05D007611 1.6e-20 102.8 73 60.3
SGA_v2.0_scaffold22G09659 Striga asiatica HOM05D002986 ORTHO05D007611 2.1e-20 102.4 80 55.0
Gohir.A05G158800 Gossypium hirsutum HOM05D002986 ORTHO05D007611 3.6e-20 101.7 84 54.8
Lalb_Chr18g0059371 Lupinus albus HOM05D002986 ORTHO05D007611 3.6e-20 101.7 76 63.2
ECA234G3389 Erigeron canadensis HOM05D002986 ORTHO05D007611 6.2e-20 100.9 88 54.5
Gohir.D05G161466 Gossypium hirsutum HOM05D002986 ORTHO05D007611 8.1e-20 100.5 84 54.8
Gorai.009G166600 Gossypium raimondii HOM05D002986 ORTHO05D007611 8.1e-20 100.5 84 54.8
Ca_00364_v3 Cicer arietinum L. HOM05D002986 ORTHO05D007611 1.1e-19 100.1 75 58.7
SHI00257 Sapria himalayana HOM05D002986 ORTHO05D007611 1.1e-19 100.1 87 52.9
MD10G1288900 Malus domestica HOM05D002986 ORTHO05D007611 3.1e-19 98.6 77 59.7
HPP92_009975 Vanilla planifolia HOM05D002986 ORTHO05D007611 4.0e-19 98.2 82 48.8
THA.LOC104798403 Tarenaya hassleriana HOM05D002986 ORTHO05D007611 8.9e-19 97.1 78 57.7
CsaV3_1G012580 Cucumis sativus L. HOM05D002986 ORTHO05D007611 2.0e-18 95.9 77 53.2
Ca_00602_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.6e-18 95.5 78 53.8
Cc02_g13870 Coffea canephora HOM05D002986 ORTHO05D007611 3.4e-18 95.1 79 58.2
Thhalv10000872m.g Eutrema salsugineum HOM05D002986 ORTHO05D007611 3.4e-18 95.1 79 53.2
GSVIVG01032691001 Vitis vinifera HOM05D002986 ORTHO05D007611 3.4e-18 95.1 80 60.0
ClCG03G008000 Citrullus lanatus HOM05D002986 ORTHO05D007611 5.8e-18 94.4 78 52.6
MELO3C035724.2 Cucumis melo HOM05D002986 ORTHO05D007611 1.3e-17 93.2 77 51.9
HanXRQChr11g0346401 Helianthus annuus HOM05D002986 ORTHO05D007611 3.7e-17 91.7 83 50.6
Aa31LG9G6870 Aethionema arabicum HOM05D002986 ORTHO05D007611 6.4e-17 90.9 78 55.1
Ah.09g237590 Amaranthus hybridus HOM05D002986 ORTHO05D007611 6.4e-17 90.9 79 53.2
AUR62014868 Chenopodium quinoa HOM05D002986 ORTHO05D007611 6.4e-17 90.9 79 51.9
AUR62031074 Chenopodium quinoa HOM05D002986 ORTHO05D007611 6.4e-17 90.9 79 51.9
Os01g0672166 Oryza sativa ssp. japonica HOM05D002986 ORTHO05D007611 6.4e-17 90.9 79 51.9
FvH4_3g08550 Fragaria vesca HOM05D002986 ORTHO05D007611 8.3e-17 90.5 78 55.1
FAN11G0723 Fragaria x ananassa HOM05D002986 ORTHO05D007611 8.3e-17 90.5 78 55.1
AL8G12410 Arabidopsis lyrata HOM05D002986 ORTHO05D007611 1.1e-16 90.1 78 52.6
A06p46180 Brassica napus HOM05D002986 ORTHO05D007611 1.1e-16 90.1 78 52.6
C07p29280 Brassica napus HOM05D002986 ORTHO05D007611 1.1e-16 90.1 78 52.6
BolC7t43470H Brassica oleracea HOM05D002986 ORTHO05D007611 1.1e-16 90.1 78 52.6
BraA06t27482Z Brassica rapa HOM05D002986 ORTHO05D007611 1.1e-16 90.1 78 52.6
AT5G46100 Arabidopsis thaliana HOM05D002986 ORTHO05D007611 1.4e-16 89.7 77 53.2
Sed0000822 Sechium edule HOM05D002986 ORTHO05D007611 1.4e-16 89.7 78 50.0
EL10Ac8g20438 Beta vulgaris HOM05D002986 ORTHO05D007611 4.1e-16 88.2 79 48.1
Carub.0008s0183 Capsella rubella HOM05D002986 ORTHO05D007611 5.4e-16 87.8 78 50.0
Sp2g10960 Schrenkiella parvula HOM05D002986 ORTHO05D007611 1.6e-15 86.3 78 51.3
C02p47050 Brassica napus HOM05D002986 ORTHO05D007611 2.7e-15 85.5 76 51.3
BolC2t10753H Brassica oleracea HOM05D002986 ORTHO05D007611 2.7e-15 85.5 76 51.3
CARHR175750 Cardamine hirsuta HOM05D002986 ORTHO05D007611 2.7e-15 85.5 78 50.0
FAN25G0667 Fragaria x ananassa HOM05D002986 ORTHO05D007611 3.5e-15 85.1 78 51.3
Lsat_1_v5_gn_4_51801 Lactuca sativa HOM05D002986 ORTHO05D007611 4.6e-15 84.7 86 45.3
Eucgr.E03340 Eucalyptus grandis HOM05D002986 ORTHO05D007611 2.3e-14 82.4 86 47.7
ATR0564G055 Amborella trichopoda HOM05D002986 ORTHO05D007611 8.6e-14 80.5 77 45.5
COL.COLO4_31418 Corchorus olitorius HOM05D002986 ORTHO05D007611 7.3e-13 77.4 55 60.0
BcaC03g16829 Brassica carinata HOM05D002986 ORTHO05D007611 3.6e-12 75.1 68 52.9
Zm00001eb359970 Zea mays HOM05D002986 ORTHO05D007611 3.6e-12 75.1 79 48.1
Duzib235G0042 Durio zibethinus HOM05D002986 ORTHO05D007611 2.3e-11 72.4 58 58.6
QL07p003708 Quercus lobata HOM05D002986 ORTHO05D007611 4.0e-11 71.6 49 65.3
Thecc.06G180800 Theobroma cacao HOM05D002986 ORTHO05D007611 4.0e-11 71.6 55 58.2
Eucgr.E03142 Eucalyptus grandis HOM05D002986 ORTHO05D007611 2.6e-10 68.9 57 57.9
Eucgr.E03343 Eucalyptus grandis HOM05D002986 ORTHO05D007611 4.4e-10 68.2 57 57.9
SEGI_18794 Sequoiadendron giganteum HOM05D002986 ORTHO05D007611 9.9e-10 67.0 83 38.6
Eucgr.E03336 Eucalyptus grandis HOM05D002986 ORTHO05D007611 2.2e-09 65.9 54 57.4
PGR083G2565 Punica granatum HOM05D002986 ORTHO05D007611 1.4e-08 63.2 62 45.2
CDE09G0204 Ceratophyllum demersum HOM05D002986 ORTHO05D007611 5.4e-08 61.2 46 56.5
Eucgr.E03144 Eucalyptus grandis HOM05D002986 ORTHO05D007611 4.6e-07 58.2 45 60.0
Eucgr.E03338 Eucalyptus grandis HOM05D002986 ORTHO05D007611 3.9e-06 55.1 51 51.0


User provided reference genes

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