Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 3.4e-115 418.3 207 100.0
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 2.7e-43 179.5 241 45.6
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 6.0e-35 151.8 208 45.7
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 5.0e-34 148.7 217 40.1
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 1.9e-33 146.7 223 40.8
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 8.0e-32 141.4 208 39.4
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 2.3e-31 139.8 240 37.9
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 4.0e-31 139.0 240 37.5
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 1.4e-28 130.6 272 33.8
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 2.4e-28 129.8 241 35.7
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.4e-28 129.8 270 32.6
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 2.4e-28 129.8 247 34.4
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 3.2e-28 129.4 239 35.6
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 3.2e-28 129.4 244 35.7
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 3.2e-28 129.4 242 33.5
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 7.0e-28 128.3 241 35.7
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 9.2e-28 127.9 238 36.1
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 1.6e-27 127.1 237 35.4
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 2.1e-27 126.7 236 35.2
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.1e-27 126.7 125 48.0
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 2.7e-27 126.3 240 32.9
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 2.7e-27 126.3 247 36.4
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 2.7e-27 126.3 233 37.3
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 3.5e-27 125.9 234 31.6
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 3.5e-27 125.9 247 34.4
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 4.6e-27 125.6 245 33.9
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 6.0e-27 125.2 237 34.6
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 6.0e-27 125.2 240 35.0
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 7.8e-27 124.8 241 33.6
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 1.3e-26 124.0 100 60.0
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 2.3e-26 123.2 147 44.9
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 3.9e-26 122.5 228 36.4
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 3.9e-26 122.5 211 35.1
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 5.1e-26 122.1 245 33.9
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 5.1e-26 122.1 230 35.2
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 5.1e-26 122.1 240 32.9
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 6.6e-26 121.7 241 34.4
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 6.6e-26 121.7 102 57.8
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 8.6e-26 121.3 240 34.2
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 8.6e-26 121.3 265 32.5
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 8.6e-26 121.3 246 33.3
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 8.6e-26 121.3 241 34.0
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 8.6e-26 121.3 147 43.5
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 1.1e-25 120.9 112 52.7
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 1.9e-25 120.2 249 32.9
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 4.3e-25 119.0 125 46.4
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 4.3e-25 119.0 271 31.7
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 4.3e-25 119.0 247 31.6
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 4.3e-25 119.0 99 59.6
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 5.6e-25 118.6 247 31.2
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 5.6e-25 118.6 247 31.2
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 5.6e-25 118.6 253 32.0
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 7.3e-25 118.2 246 32.9
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 7.3e-25 118.2 271 31.4
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 7.3e-25 118.2 254 33.5
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 9.5e-25 117.9 241 34.9
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 1.6e-24 117.1 254 33.1
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 2.8e-24 116.3 103 50.5
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 4.7e-24 115.5 103 50.5
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 6.2e-24 115.2 195 37.9
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 8.1e-24 114.8 108 49.1
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 8.1e-24 114.8 97 57.7
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 1.1e-23 114.4 240 32.5
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 1.1e-23 114.4 244 32.0
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 1.4e-23 114.0 240 32.9
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 1.4e-23 114.0 101 55.4
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 1.8e-23 113.6 234 33.3
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 1.8e-23 113.6 109 54.1
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 4.0e-23 112.5 103 49.5
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 4.0e-23 112.5 103 49.5
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 4.0e-23 112.5 98 55.1
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 4.0e-23 112.5 103 52.4
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 6.8e-23 111.7 230 34.8
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 6.8e-23 111.7 98 52.0
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 8.9e-23 111.3 103 53.4
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 8.9e-23 111.3 234 33.3
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 1.5e-22 110.5 236 32.6
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 2.0e-22 110.2 94 53.2
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 2.6e-22 109.8 247 30.4
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 2.6e-22 109.8 98 51.0
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 7.5e-22 108.2 249 31.7
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 9.9e-22 107.8 110 52.7
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 9.9e-22 107.8 104 51.0
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 9.9e-22 107.8 232 31.9
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 2.2e-21 106.7 229 34.1
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 6.4e-21 105.1 125 44.0
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 8.3e-21 104.8 237 33.8
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 1.4e-20 104.0 96 52.1
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 5.4e-20 102.1 103 46.6
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 9.2e-20 101.3 99 49.5
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 9.2e-20 101.3 226 34.5
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 1.6e-19 100.5 90 50.0
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 1.6e-19 100.5 245 28.2
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 1.6e-19 100.5 87 52.9
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 2.7e-19 99.8 230 30.4
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 4.6e-19 99.0 108 46.3
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 6.0e-19 98.6 254 28.3
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 7.8e-19 98.2 109 42.2
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.7e-18 97.1 102 48.0
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 3.0e-18 96.3 94 48.9
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 3.9e-18 95.9 99 48.5
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 1.1e-17 94.4 102 44.1
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 2.5e-17 93.2 233 30.0
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 1.2e-16 90.9 216 28.7
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 1.2e-16 90.9 234 29.9
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 3.6e-16 89.4 257 29.6
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 1.8e-15 87.0 226 33.2
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 1.5e-14 84.0 57 63.2
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.4e-14 82.8 269 26.8
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.4e-14 82.8 269 26.8
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 2.2e-13 80.1 143 35.0
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 8.4e-13 78.2 255 27.5
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 2.3e-10 70.1 61 52.5
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 1.9e-09 67.0 195 27.2
CDE06G2693 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 5.6e-09 65.5 146 34.2
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 9.6e-09 64.7 191 28.3
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 2.1e-08 63.5 195 26.2
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 6.2e-08 62.0 249 25.7
SHI14999 Sapria himalayana HOM05D005377 ORTHO05D003034 1.5e-06 57.4 30 86.7
CARHR239060 Cardamine hirsuta HOM05D006099 ORTHO05D007317 3.4e-06 56.2 32 71.9


User provided reference genes

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