Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 7.1e-201 703.7 360 100.0
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 1.2e-80 304.3 389 46.0
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 9.3e-68 261.5 391 43.7
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 2.7e-59 233.4 406 39.9
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 3.5e-59 233.0 392 43.1
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 5.3e-55 219.2 382 40.6
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 5.8e-54 215.7 362 40.1
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 8.4e-53 211.8 380 38.2
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 3.5e-51 206.5 374 38.8
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 1.5e-49 201.1 385 39.2
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 2.5e-49 200.3 403 38.2
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 1.4e-47 194.5 401 38.7
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 4.1e-47 193.0 394 37.6
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 4.1e-47 193.0 362 40.1
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 2.9e-45 186.8 364 41.2
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 6.5e-45 185.7 431 38.7
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 3.5e-43 179.9 367 37.3
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 1.8e-42 177.6 380 37.4
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 5.7e-41 172.6 357 35.6
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 1.3e-40 171.4 362 37.6
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 2.4e-39 167.2 387 34.1
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 3.4e-38 163.3 376 34.8
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 1.7e-37 161.0 388 34.3
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 9.7e-33 145.2 357 35.3
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.6e-30 137.1 358 34.4
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.6e-30 137.1 358 34.4
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 1.3e-29 134.8 434 31.3
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 7.9e-27 125.6 377 29.7
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 1.6e-22 111.3 359 29.2
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 9.4e-20 102.1 366 28.4
Eucgr.E04236 Eucalyptus grandis HOM05D009025 ORTHO05D011227 1.1e-15 88.6 130 41.5
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 1.0e-13 82.0 362 25.7
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 1.0e-13 82.0 359 25.3
SEGI_13045 Sequoiadendron giganteum HOM05D043371 ORTHO05D050979 4.2e-12 76.6 504 23.6
SEGI_22478 Sequoiadendron giganteum HOM05D043371 ORTHO05D050979 1.2e-11 75.1 508 22.4
Haze_07066 Corylus avellana HOM05D009025 ORTHO05D011227 2.1e-11 74.3 233 30.5
Atru.chr1.2205 Acer truncatum HOM05D009025 ORTHO05D011227 1.8e-10 71.2 140 38.6
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 5.2e-10 69.7 173 31.2


User provided reference genes

Program Settings