Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0359 Trochodendron aralioides HOM05D004564 ORTHO05D006106 8.2e-82 307.0 154 100.0
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 3.7e-74 281.6 151 94.0
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 1.9e-70 269.2 151 88.7
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 1.4e-68 263.1 151 84.1
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 2.0e-67 259.2 151 82.8
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 2.0e-67 259.2 151 82.8
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 2.0e-67 259.2 151 82.8
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 1.7e-66 256.1 151 80.8
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 1.7e-66 256.1 151 80.8
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 2.2e-66 255.8 151 79.5
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 2.2e-66 255.8 151 80.1
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 4.9e-66 254.6 151 80.8
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 1.8e-65 252.7 152 83.6
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 1.8e-65 252.7 151 79.5
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 1.8e-65 252.7 151 80.1
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 7.0e-65 250.8 151 80.1
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 1.6e-64 249.6 151 78.8
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 3.5e-64 248.4 151 80.1
Hma1.2p1_0539F.1_g174590 Hydrangea macrophylla HOM05D004564 ORTHO05D006106 7.7e-64 247.3 153 80.4
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 2.9e-63 245.4 150 82.7
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 2.9e-63 245.4 151 76.2
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 6.6e-63 244.2 151 75.5
vmacro08737 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 6.6e-63 244.2 152 80.3
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 4.2e-62 241.5 151 76.8
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 6.1e-61 237.7 151 75.5
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 1.0e-60 236.9 151 74.2
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 1.0e-60 236.9 152 76.3
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 3.0e-60 235.3 151 72.8
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 4.0e-60 235.0 151 73.5
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 5.2e-60 234.6 151 73.5
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 1.2e-59 233.4 153 76.5
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 2.0e-59 232.6 143 78.3
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 2.0e-59 232.6 151 72.8
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 2.6e-59 232.3 151 73.5
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 3.4e-59 231.9 151 72.8
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 4.4e-59 231.5 151 72.2
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 5.7e-59 231.1 151 72.2
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 7.5e-59 230.7 151 70.2
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 9.8e-59 230.3 143 77.6
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.7e-58 229.6 151 70.9
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 2.2e-58 229.2 151 72.8
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 2.2e-58 229.2 151 72.8
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 2.9e-58 228.8 151 71.5
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 2.9e-58 228.8 151 74.8
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 2.9e-58 228.8 151 74.8
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 2.9e-58 228.8 151 70.9
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 4.9e-58 228.0 151 70.2
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 4.9e-58 228.0 151 70.2
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 4.9e-58 228.0 151 74.8
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 4.9e-58 228.0 151 74.8
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 8.3e-58 227.3 151 70.2
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 1.4e-57 226.5 151 70.2
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 2.4e-57 225.7 152 75.0
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 2.4e-57 225.7 152 73.0
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 2.4e-57 225.7 151 69.5
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 5.4e-57 224.6 151 68.9
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 7.0e-57 224.2 152 73.0
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 2.7e-56 222.2 152 73.7
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 2.7e-56 222.2 151 71.5
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 5.9e-56 221.1 152 73.0
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 5.9e-56 221.1 152 73.0
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 1.3e-55 219.9 151 70.9
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 2.3e-55 219.2 151 70.2
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 2.3e-55 219.2 152 71.7
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 3.9e-55 218.4 142 74.6
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.1e-54 216.9 151 69.5
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 1.1e-54 216.9 152 71.1
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 1.5e-54 216.5 151 71.5
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 7.3e-54 214.2 151 68.9
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 1.6e-53 213.0 151 66.9
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 1.6e-53 213.0 151 66.9
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 1.6e-53 213.0 140 72.1
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 4.7e-53 211.5 151 66.2
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 4.7e-53 211.5 151 66.2
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 3.1e-52 208.8 139 71.9
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 4.0e-52 208.4 150 70.0
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 6.8e-52 207.6 151 68.2
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 2.6e-51 205.7 156 67.3
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 2.6e-51 205.7 154 68.8
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 3.4e-51 205.3 152 64.5
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 9.8e-51 203.8 152 69.1
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 3.7e-50 201.8 151 67.5
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 6.4e-50 201.1 143 69.9
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 1.6e-48 196.4 151 64.2
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 4.6e-48 194.9 151 65.6
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 1.0e-47 193.7 163 64.4
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 3.9e-47 191.8 152 65.8
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 3.9e-47 191.8 163 64.4
arahy.Tifrunner.gnm1.ann1.UKG9X7 Arachis hypogaea HOM05D004564 ORTHO05D006106 4.3e-46 188.3 152 65.8
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 6.2e-45 184.5 150 67.3
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 5.2e-44 181.4 156 62.8
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 3.4e-43 178.7 100 84.0
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 1.6e-40 169.9 152 60.5
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 1.3e-39 166.8 155 52.9
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 2.8e-37 159.1 145 52.4
SHI30097 Sapria himalayana HOM05D004564 ORTHO05D006106 2.3e-31 139.4 199 42.2
HPP92_001899 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.1e-30 137.1 122 53.3
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 1.2e-29 133.7 103 64.1
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 1.4e-28 130.2 100 64.0
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 4.2e-25 118.6 147 46.3
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 2.1e-24 116.3 153 45.8
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 1.0e-23 114.0 147 43.5
ATR0763G243 Amborella trichopoda HOM05D004564 ORTHO05D006106 2.8e-21 105.9 101 55.4
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 3.8e-18 95.5 150 43.3
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 8.4e-18 94.4 56 76.8
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 4.2e-17 92.0 148 39.2
Lalb_Chr10g0106561 Lupinus albus HOM05D004564 ORTHO05D006106 3.5e-16 89.0 58 74.1
MD17G1134600 Malus domestica HOM05D004564 ORTHO05D006106 3.3e-06 55.8 32 78.1


User provided reference genes

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