Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.3e-195 684.5 348 100.0
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.1e-161 573.5 348 82.8
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 7.9e-149 530.8 348 75.6
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 6.7e-148 527.7 348 75.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 9.7e-147 523.9 346 75.1
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 9.4e-142 507.3 340 75.9
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.6e-136 489.2 345 71.6
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 7.2e-134 481.1 320 75.3
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.6e-133 479.9 338 71.9
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 4.7e-133 478.4 339 71.7
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 3.0e-132 475.7 326 71.5
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 4.0e-132 475.3 352 69.6
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 6.7e-132 474.6 345 70.4
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 8.8e-132 474.2 338 71.0
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.5e-131 473.4 338 71.3
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 2.0e-131 473.0 352 68.2
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 2.6e-131 472.6 342 70.5
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 3.3e-131 472.2 349 67.6
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 4.4e-131 471.9 343 69.1
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 5.7e-131 471.5 344 68.6
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.3e-130 470.3 344 69.8
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 6.3e-130 468.0 340 70.0
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 1.4e-129 466.8 342 69.3
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.8e-129 466.5 349 69.1
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 5.3e-129 464.9 321 72.0
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.2e-128 463.8 322 69.3
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 1.3e-127 460.3 339 65.8
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.1e-126 457.2 357 67.2
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 9.4e-126 454.1 338 68.9
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.6e-125 453.4 363 64.5
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 2.1e-125 453.0 341 67.4
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 1.0e-124 450.7 344 65.4
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 2.3e-124 449.5 338 67.5
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 6.8e-124 448.0 346 63.6
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 8.8e-124 447.6 345 66.4
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 1.2e-123 447.2 336 65.2
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.5e-123 446.8 353 66.0
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.5e-123 446.8 353 66.0
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 3.4e-123 445.7 344 66.9
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 4.4e-123 445.3 356 66.3
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.7e-123 444.9 338 65.7
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 9.8e-123 444.1 348 64.1
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 2.8e-122 442.6 338 66.6
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 4.8e-122 441.8 321 70.1
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 4.8e-122 441.8 318 69.8
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 4.8e-122 441.8 341 64.8
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 1.4e-121 440.3 312 69.2
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.4e-121 440.3 313 68.1
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.4e-121 440.3 339 64.0
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.4e-121 440.3 341 64.5
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.4e-121 440.3 338 65.1
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 7.0e-121 438.0 348 62.9
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 7.0e-121 438.0 317 68.8
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 7.0e-121 438.0 341 63.6
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.6e-120 436.8 334 66.2
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 5.9e-120 434.9 347 65.7
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 7.7e-120 434.5 346 64.5
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 7.7e-120 434.5 350 64.9
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 7.7e-120 434.5 339 64.6
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 5.0e-119 431.8 320 67.2
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 8.5e-119 431.0 341 65.4
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 8.5e-119 431.0 315 69.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.1e-118 430.6 348 65.2
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.2e-117 427.2 314 69.7
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.6e-117 426.8 348 62.4
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 2.7e-117 426.0 335 63.6
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 3.6e-117 425.6 341 64.8
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 3.6e-117 425.6 341 64.8
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 8.0e-117 424.5 341 64.5
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 8.0e-117 424.5 335 63.6
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 8.0e-117 424.5 338 63.9
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 8.0e-117 424.5 320 64.7
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 1.0e-116 424.1 349 60.7
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.4e-116 423.7 338 67.5
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 1.8e-116 423.3 341 64.2
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 1.8e-116 423.3 341 64.2
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 6.8e-116 421.4 312 67.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 6.8e-116 421.4 312 67.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 6.8e-116 421.4 312 67.3
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 1.5e-115 420.2 349 61.3
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 2.0e-115 419.9 342 62.9
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 9.8e-115 417.5 349 60.7
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 2.2e-114 416.4 351 61.3
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 1.1e-113 414.1 336 64.9
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 2.4e-113 412.9 320 65.0
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 5.4e-113 411.8 336 62.5
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 2.0e-112 409.8 305 69.2
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 2.7e-112 409.5 314 65.0
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 2.3e-111 406.4 334 62.0
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 5.6e-110 401.7 342 61.4
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 1.2e-109 400.6 318 63.5
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.6e-109 400.2 338 62.7
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 5.2e-108 395.2 349 59.9
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.6e-107 392.9 339 59.0
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.6e-107 392.9 339 59.0
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.3e-106 390.6 349 61.6
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.3e-106 387.9 343 59.5
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 1.8e-105 386.7 341 56.6
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 1.7e-103 380.2 352 58.2
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 3.9e-103 379.0 338 58.3
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 4.3e-102 375.6 324 58.0
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 4.3e-102 375.6 269 70.3
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.6e-101 373.6 317 58.7
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.4e-100 370.5 350 54.6
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.5e-99 367.1 327 59.9
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.0e-99 366.7 317 57.4
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 7.5e-99 364.8 347 53.9
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 7.5e-99 364.8 317 55.8
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.7e-98 362.5 349 54.2
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 4.1e-97 359.0 340 52.9
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 2.7e-96 356.3 295 61.0
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.6e-96 355.5 282 66.3
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 3.9e-95 352.4 319 56.1
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 5.0e-95 352.1 319 53.6
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.3e-94 349.4 314 55.7
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 4.3e-94 349.0 412 49.8
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.6e-94 348.6 322 53.7
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 4.7e-93 345.5 256 66.0
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-92 344.4 330 54.5
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 5.2e-92 342.0 336 52.4
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.2e-91 340.9 304 57.6
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.4e-91 339.3 334 51.2
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 4.4e-91 339.0 326 54.6
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 2.9e-90 336.3 347 51.3
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.1e-89 334.3 348 48.6
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 1.9e-89 333.6 324 51.5
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 5.4e-89 332.0 338 53.6
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 9.2e-89 331.3 338 53.6
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 9.2e-89 331.3 347 50.4
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.1e-88 330.1 321 49.5
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.1e-88 330.1 347 50.1
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 1.9e-86 323.6 345 50.7
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 9.5e-86 321.2 344 50.0
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 1.2e-85 320.9 255 65.5
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 2.1e-85 320.1 344 50.0
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 2.8e-85 319.7 312 51.9
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 6.2e-85 318.5 332 52.7
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 6.8e-84 315.1 346 49.1
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 6.8e-84 315.1 346 49.1
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 3.4e-83 312.8 286 57.0
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 5.8e-83 312.0 317 50.8
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.7e-82 310.5 341 49.6
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 3.2e-81 306.2 311 48.9
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 9.2e-81 304.7 179 80.4
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-80 303.9 222 67.6
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.6e-79 298.5 271 55.7
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 1.2e-77 294.3 268 57.1
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.6e-75 286.6 189 73.5
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 7.6e-75 285.0 189 72.5
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.6e-75 285.0 191 70.2
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 1.6e-72 277.3 189 68.8
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 1.3e-69 267.7 322 46.9
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 6.9e-68 261.9 183 71.6
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.9e-66 255.8 189 63.0
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 2.2e-58 230.3 338 40.5
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 1.9e-57 227.3 190 57.4
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 2.1e-56 223.8 228 53.5
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.1e-55 219.2 184 56.5
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 2.5e-54 216.9 246 46.3
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 2.9e-50 203.4 110 90.0
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 3.8e-50 203.0 335 39.1
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 9.6e-46 188.3 157 61.1
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 2.2e-37 160.6 172 48.8
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 3.8e-34 149.8 160 54.4
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 3.8e-34 149.8 162 51.2
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 7.2e-33 145.6 104 70.2
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 2.7e-32 143.7 92 71.7
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 6.7e-31 139.0 89 71.9
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 1.7e-29 134.4 95 66.3
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 1.2e-27 128.3 311 31.2
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 9.4e-25 118.6 77 74.0
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 5.9e-19 99.4 81 54.3
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 1.3e-18 98.2 75 68.0
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 1.3e-18 98.2 80 56.2
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 1.9e-17 94.4 76 59.2
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 1.5e-14 84.7 57 70.2
SMO351G0034 Selaginella moellendorffii HOM05D003755 ORTHO05D376906 2.6e-14 84.0 309 25.9
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 6.3e-13 79.3 57 66.7
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 1.4e-12 78.2 74 58.1
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 4.5e-11 73.2 69 55.1
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 5.0e-10 69.7 54 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.7e-08 63.9 69 46.4


User provided reference genes

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