Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 7.9e-135 483.8 247 100.0
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 1.2e-127 459.9 247 93.5
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.2e-127 459.9 245 94.3
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.6e-127 459.5 243 94.7
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.7e-127 458.8 247 93.9
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.7e-127 458.8 247 93.9
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 4.6e-127 458.0 247 92.7
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 6.1e-127 457.6 245 93.5
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 1.3e-126 456.4 247 92.3
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 2.3e-126 455.7 243 93.8
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 3.0e-126 455.3 247 91.9
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 5.1e-126 454.5 247 91.5
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 5.1e-126 454.5 247 91.5
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 8.7e-126 453.8 247 92.7
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 8.7e-126 453.8 245 93.1
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.1e-125 453.4 245 91.8
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 1.9e-125 452.6 243 93.0
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 1.9e-125 452.6 243 92.6
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 2.5e-125 452.2 245 91.8
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 4.3e-125 451.4 245 90.6
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 5.7e-125 451.1 247 92.3
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 5.7e-125 451.1 244 92.6
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 5.7e-125 451.1 247 91.5
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 7.4e-125 450.7 248 92.7
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 91.0
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 92.7
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 9.7e-125 450.3 243 93.0
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 9.7e-125 450.3 243 92.6
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 1.6e-124 449.5 246 91.9
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 1.6e-124 449.5 246 91.9
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 2.2e-124 449.1 247 90.7
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 2.2e-124 449.1 247 90.7
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 2.2e-124 449.1 247 91.5
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 2.2e-124 449.1 245 91.8
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 2.2e-124 449.1 245 91.8
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 2.8e-124 448.7 247 90.7
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 4.8e-124 448.0 246 91.5
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 4.8e-124 448.0 245 92.2
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 4.8e-124 448.0 245 91.0
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 4.8e-124 448.0 245 91.0
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 90.6
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 91.8
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 6.3e-124 447.6 247 91.5
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 6.3e-124 447.6 247 91.5
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 6.3e-124 447.6 247 90.3
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 91.4
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 8.2e-124 447.2 247 91.5
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 8.2e-124 447.2 248 90.7
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 1.1e-123 446.8 243 91.8
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 91.1
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 90.7
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 1.4e-123 446.4 243 92.2
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 1.4e-123 446.4 245 91.0
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 89.5
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 1.8e-123 446.0 247 89.1
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 1.8e-123 446.0 245 89.4
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.8e-123 446.0 247 90.7
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.8e-123 446.0 247 90.7
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 1.8e-123 446.0 243 90.9
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 2.4e-123 445.7 247 90.3
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 2.4e-123 445.7 245 91.0
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 89.9
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 90.3
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 89.9
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 90.7
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 90.3
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 4.1e-123 444.9 247 90.3
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 4.1e-123 444.9 243 91.8
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 5.3e-123 444.5 247 90.3
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 5.3e-123 444.5 247 89.9
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 6.9e-123 444.1 247 89.9
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 9.0e-123 443.7 245 90.2
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 91.0
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 90.6
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.2e-122 443.4 247 90.3
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 1.2e-122 443.4 247 90.3
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 1.2e-122 443.4 246 90.2
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 1.2e-122 443.4 246 90.2
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 89.5
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.5e-122 443.0 245 90.2
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 2.6e-122 442.2 245 90.6
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 2.6e-122 442.2 243 91.4
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 3.4e-122 441.8 245 89.4
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.4e-122 441.8 250 89.2
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 3.4e-122 441.8 247 89.9
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 90.6
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 90.2
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 90.6
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 89.4
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 89.4
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 89.4
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 90.2
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 89.4
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 5.9e-122 441.0 245 90.2
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 89.8
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 90.6
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 7.7e-122 440.7 246 89.8
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 90.2
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 90.2
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 1.3e-121 439.9 245 89.8
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 1.3e-121 439.9 245 90.2
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 1.7e-121 439.5 245 89.0
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.2e-121 439.1 245 89.4
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 3.8e-121 438.3 245 88.6
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 3.8e-121 438.3 245 89.4
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 5.0e-121 438.0 248 89.1
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 89.4
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 1.9e-120 436.0 243 90.9
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 2.5e-120 435.6 235 93.6
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 9.4e-120 433.7 246 89.4
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 9.4e-120 433.7 246 89.4
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 1.2e-119 433.3 286 79.4
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.2e-119 433.3 246 89.8
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 2.7e-119 432.2 245 87.8
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 3.6e-119 431.8 248 87.9
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 4.6e-119 431.4 248 87.9
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 4.6e-119 431.4 269 83.3
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 1.4e-118 429.9 248 87.5
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 3.0e-118 428.7 245 87.8
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 3.9e-118 428.3 245 86.1
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 8.8e-118 427.2 306 74.8
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 5.7e-117 424.5 290 77.2
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 7.4e-117 424.1 248 86.3
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 2.2e-116 422.5 248 86.3
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 3.7e-116 421.8 260 83.1
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 1.4e-115 419.9 247 86.6
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 1.2e-111 406.8 334 66.8
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 1.0e-110 403.7 249 82.3
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 4.4e-109 398.3 251 79.7
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 9.7e-109 397.1 245 81.2
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 1.3e-108 396.7 214 92.5
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 8.2e-108 394.0 249 79.5
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 8.2e-108 394.0 253 78.3
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 3.1e-107 392.1 211 91.0
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 3.1e-107 392.1 211 91.0
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 2.6e-106 389.0 251 77.7
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.3e-105 386.7 266 76.7
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 1.9e-104 382.9 251 75.7
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 1.4e-102 376.7 213 89.2
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 5.7e-101 371.3 359 59.3
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 8.8e-94 347.4 245 73.9
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 5.0e-89 331.6 198 88.4
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.9e-88 329.7 245 72.2
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 9.4e-88 327.4 247 71.7
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 2.0e-82 309.7 179 88.3
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 5.0e-81 305.1 172 89.5
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 1.1e-80 303.9 172 89.5
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 3.3e-80 302.4 165 90.9
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 5.5e-80 301.6 166 89.2
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 4.7e-71 271.9 278 55.8
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 2.6e-61 239.6 241 50.2
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.4e-59 233.8 138 85.5
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 1.1e-48 197.6 232 44.8
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.7e-47 192.2 247 50.2
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 4.0e-46 189.1 246 43.9
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 2.0e-45 186.8 102 90.2
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 2.5e-40 169.9 199 54.3
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.3e-39 167.5 92 89.1
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 4.2e-35 152.5 165 54.5
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 1.5e-29 134.0 139 54.7
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 2.0e-29 133.7 82 81.7
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 6.4e-28 128.6 84 76.2
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 7.1e-27 125.2 83 78.3
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 3.5e-26 122.9 82 81.7
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 6.7e-25 118.6 229 36.7
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 4.3e-24 115.9 212 42.9
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 6.5e-20 102.1 99 50.5
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 4.6e-18 95.9 51 88.2
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 1.5e-16 90.9 57 84.2
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 2.8e-15 86.7 46 87.0
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 4.1e-14 82.8 51 84.3
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 5.3e-14 82.4 74 66.2
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 6.9e-14 82.0 52 86.5
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 7.6e-13 78.6 79 58.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-11 72.0 38 86.8
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 4.6e-10 69.3 94 52.1
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 6.1e-10 68.9 90 52.2
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 2.3e-09 67.0 45 80.0
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 4.8e-07 59.3 90 50.0
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 1.4e-06 57.8 87 48.3
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 2.4e-06 57.0 34 70.6
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 2.4e-06 57.0 34 70.6
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 6.9e-06 55.5 34 67.6


User provided reference genes

Program Settings