Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 5.8e-74 280.8 142 100.0
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 4.5e-26 121.7 130 47.7
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 4.7e-23 111.7 133 51.1
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 8.0e-23 110.9 123 53.7
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 1.2e-21 107.1 122 53.3
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 8.3e-20 100.9 138 41.3
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.1e-19 100.5 131 46.6
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.4e-19 100.1 130 46.9
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 5.4e-19 98.2 124 48.4
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.5e-18 95.1 126 42.9
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 5.9e-18 94.7 137 43.1
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 7.7e-18 94.4 130 44.6
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.0e-17 94.0 134 43.3
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.3e-17 92.8 134 42.5
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.8e-17 92.0 134 41.8
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 5.0e-17 91.7 139 45.3
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 8.6e-17 90.9 131 43.5
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 1.1e-16 90.5 123 43.9
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 1.9e-16 89.7 119 43.7
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 3.3e-16 89.0 130 49.2
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.3e-16 89.0 131 42.7
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.2e-16 88.6 136 38.2
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 7.2e-16 87.8 141 39.7
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 7.2e-16 87.8 132 43.9
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 7.2e-16 87.8 114 44.7
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 7.2e-16 87.8 129 39.5
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 9.5e-16 87.4 124 39.5
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.2e-15 87.0 113 44.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.6e-15 86.7 130 40.8
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 2.8e-15 85.9 131 41.2
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.7e-15 85.1 142 40.8
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 8.0e-15 84.3 113 46.0
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 8.0e-15 84.3 130 40.0
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 8.0e-15 84.3 129 40.3
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.8e-14 83.2 123 43.1
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 2.3e-14 82.8 117 43.6
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 4.0e-14 82.0 122 41.0
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.0e-14 82.0 129 39.5
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 8.9e-14 80.9 113 44.2
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.5e-13 80.1 117 42.7
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 2.0e-13 79.7 134 44.8
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.6e-13 79.3 118 42.4
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 3.4e-13 79.0 132 40.9
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 3.4e-13 79.0 125 43.2
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 3.4e-13 79.0 128 41.4
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 3.4e-13 79.0 133 39.1
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 4.4e-13 78.6 112 42.9
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 4.4e-13 78.6 143 39.2
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 9.8e-13 77.4 116 43.1
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 9.8e-13 77.4 120 40.0
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.3e-12 77.0 122 39.3
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 2.2e-12 76.3 136 39.7
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 2.8e-12 75.9 125 39.2
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 2.8e-12 75.9 125 37.6
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.9e-12 75.1 131 37.4
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 4.9e-12 75.1 126 38.9
MBI02_g25781_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 6.3e-12 74.7 141 40.4
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 6.3e-12 74.7 126 36.5
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.1e-11 73.9 128 36.7
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 1.8e-11 73.2 124 37.9
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.8e-11 73.2 110 42.7
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 3.1e-11 72.4 116 44.0
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.1e-11 72.0 127 37.0
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 5.4e-11 71.6 130 33.8
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 7.0e-11 71.2 142 40.1
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 9.2e-11 70.9 133 36.8
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 9.2e-11 70.9 132 39.4
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.2e-10 70.5 139 38.1
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.2e-10 70.5 139 38.1
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.2e-10 70.5 140 40.7
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.2e-10 70.5 139 38.1
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.2e-10 70.5 122 35.2
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.2e-10 70.5 122 44.3
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 1.6e-10 70.1 129 38.0
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.6e-10 70.1 143 37.1
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.0e-10 69.7 128 36.7
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 2.7e-10 69.3 121 43.0
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 2.7e-10 69.3 142 37.3
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.5e-10 68.6 121 38.0
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 4.5e-10 68.6 129 32.6
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 4.5e-10 68.6 126 34.1
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 4.5e-10 68.6 119 38.7
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 5.9e-10 68.2 125 38.4
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 7.8e-10 67.8 115 39.1
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 7.8e-10 67.8 129 36.4
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 7.8e-10 67.8 120 40.0
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.0e-09 67.4 110 40.9
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.3e-09 67.0 127 37.8
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 1.7e-09 66.6 133 36.8
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.7e-09 66.6 132 33.3
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.3e-09 66.2 115 37.4
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 2.3e-09 66.2 127 40.9
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 5.0e-09 65.1 133 33.1
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 5.0e-09 65.1 125 33.6
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 6.6e-09 64.7 127 35.4
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 8.6e-09 64.3 136 38.2
Thhalv10009012m.g Eutrema salsugineum HOM05D012212 ORTHO05D006213 1.1e-08 63.9 131 38.2
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 1.5e-08 63.5 126 33.3
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.5e-08 63.5 132 34.8
EL10Ac9g21553 Beta vulgaris HOM05D026734 ORTHO05D006213 2.5e-08 62.8 111 38.7
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 3.3e-08 62.4 147 36.1
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 3.3e-08 62.4 128 35.9
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 5.6e-08 61.6 129 30.2
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 1.2e-07 60.5 136 32.4
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.6e-07 60.1 148 34.5
AL1G44550 Arabidopsis lyrata HOM05D012212 ORTHO05D006213 2.8e-07 59.3 140 35.0
CDE12G0274 Ceratophyllum demersum HOM05D000474 ORTHO05D008385 2.8e-07 59.3 100 44.0
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 3.6e-07 58.9 134 36.6
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 6.1e-07 58.2 118 37.3
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 6.1e-07 58.2 135 36.3
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 6.1e-07 58.2 119 37.8
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.0e-06 57.4 107 40.2
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 1.0e-06 57.4 131 34.4
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 1.8e-06 56.6 132 34.1
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 2.3e-06 56.2 120 34.2
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 3.0e-06 55.8 134 33.6
ATR0165G002 Amborella trichopoda HOM05D005932 ORTHO05D006213 4.0e-06 55.5 100 38.0


User provided reference genes

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