Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 8.0e-106 387.1 197 100.0
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 4.9e-47 191.8 148 68.2
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 3.2e-46 189.1 147 66.0
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 7.1e-46 188.0 150 67.3
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.6e-45 186.8 148 67.6
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.0e-44 184.1 143 67.1
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.3e-44 183.7 145 68.3
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 1.8e-44 183.3 143 65.7
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 3.0e-44 182.6 150 64.7
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 6.7e-44 181.4 145 67.6
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.5e-43 180.3 147 66.7
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.5e-43 180.3 150 64.0
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 3.3e-43 179.1 147 66.0
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 4.3e-43 178.7 144 67.4
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 6.2e-42 174.9 148 65.5
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.1e-41 174.1 147 67.3
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 1.4e-41 173.7 144 66.0
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 1.8e-41 173.3 147 64.6
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 2.4e-41 172.9 149 65.8
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 3.1e-41 172.6 149 64.4
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 6.9e-41 171.4 147 62.6
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.5e-40 170.2 147 63.3
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 2.0e-40 169.9 149 63.1
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.6e-40 169.5 148 64.2
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 5.8e-40 168.3 149 60.4
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 5.8e-40 168.3 150 61.3
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 5.8e-40 168.3 147 62.6
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.7e-39 166.8 141 64.5
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 2.2e-39 166.4 137 66.4
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 2.2e-39 166.4 147 60.5
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 3.8e-39 165.6 143 63.6
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 5.0e-39 165.2 147 62.6
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 6.5e-39 164.9 147 61.2
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 8.4e-39 164.5 142 62.0
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.1e-38 164.1 147 63.9
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.4e-38 163.7 147 63.9
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 1.9e-38 163.3 148 64.2
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 9.3e-38 161.0 144 59.7
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.2e-37 160.6 154 61.7
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.6e-37 160.2 104 79.8
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 2.1e-37 159.8 125 68.8
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 2.3e-36 156.4 147 61.9
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 3.9e-36 155.6 144 61.1
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 5.1e-36 155.2 151 62.9
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 6.7e-36 154.8 128 67.2
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.9e-35 153.3 149 57.0
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 4.3e-35 152.1 138 61.6
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 5.7e-35 151.8 149 56.4
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 5.7e-35 151.8 146 57.5
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 7.4e-35 151.4 90 80.0
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 9.7e-35 151.0 144 59.7
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 1.3e-34 150.6 124 65.3
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 1.3e-34 150.6 146 57.5
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 1.3e-34 150.6 143 62.2
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 1.3e-34 150.6 132 63.6
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 1.6e-34 150.2 86 84.9
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.7e-34 149.1 124 65.3
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 3.7e-34 149.1 141 58.9
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 3.7e-34 149.1 148 59.5
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 4.8e-34 148.7 167 50.9
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 6.3e-34 148.3 144 58.3
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.1e-33 147.5 139 59.7
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.1e-33 147.5 139 59.7
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.1e-33 147.5 139 59.7
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.1e-33 147.5 146 57.5
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 1.1e-33 147.5 84 85.7
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 2.4e-33 146.4 130 60.8
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 2.4e-33 146.4 130 60.8
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.4e-33 146.4 93 78.5
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.4e-33 146.4 93 78.5
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 3.1e-33 146.0 134 61.2
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 3.1e-33 146.0 100 74.0
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.1e-33 146.0 144 59.0
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.1e-33 146.0 144 59.0
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 5.3e-33 145.2 109 69.7
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 5.3e-33 145.2 143 57.3
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 3.4e-32 142.5 94 74.5
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 7.7e-32 141.4 146 56.2
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 7.7e-32 141.4 105 72.4
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 1.3e-31 140.6 152 54.6
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 1.7e-31 140.2 100 70.0
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 1.7e-31 140.2 85 78.8
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.7e-31 140.2 89 75.3
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 2.2e-31 139.8 103 71.8
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 2.9e-31 139.4 89 73.0
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 5.0e-31 138.7 82 79.3
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 8.5e-31 137.9 192 45.8
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.1e-30 137.5 109 69.7
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.4e-30 137.1 146 55.5
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 3.2e-30 136.0 105 69.5
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.0e-28 129.4 112 65.2
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 8.8e-28 127.9 102 64.7
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 2.5e-27 126.3 74 82.4
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 7.4e-27 124.8 104 68.3
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 9.7e-27 124.4 98 61.2
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.3e-26 124.0 71 83.1
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 2.8e-26 122.9 109 56.9
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.5e-24 115.5 177 43.5
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 2.2e-23 113.2 95 58.9
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 1.4e-22 110.5 89 62.9
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 2.3e-20 103.2 80 62.5
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 7.4e-19 98.2 119 52.1
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.0e-17 91.7 51 86.3
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 8.5e-15 84.7 68 69.1
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 2.5e-14 83.2 66 71.2
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 8.5e-07 58.2 56 57.1


User provided reference genes

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