Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.6e-124 448.7 226 100.0
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 7.5e-124 447.2 226 99.6
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.3e-123 444.1 226 98.7
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 2.4e-106 389.0 225 85.8
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.3e-104 383.3 218 88.1
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 1.2e-102 376.7 225 82.2
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.1e-101 373.6 225 84.0
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.4e-101 373.2 225 82.7
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 2.0e-100 369.4 224 82.6
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 3.4e-100 368.6 224 82.6
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.9e-99 364.8 219 83.1
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 3.2e-98 362.1 221 83.3
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 4.1e-98 361.7 219 83.1
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 4.1e-98 361.7 219 81.3
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 9.2e-98 360.5 219 83.1
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 2.1e-97 359.4 208 87.0
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 4.6e-97 358.2 207 85.0
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 6.0e-97 357.8 221 79.6
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 6.0e-97 357.8 219 83.6
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.8e-97 357.5 221 81.9
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 2.3e-96 355.9 215 82.3
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 2.3e-96 355.9 210 84.3
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.0e-96 355.5 210 83.8
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.1e-95 353.6 219 81.7
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.5e-95 353.2 219 81.7
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.9e-95 352.8 219 80.4
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.9e-95 352.8 214 81.8
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 4.3e-95 351.7 213 81.2
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 7.3e-95 350.9 219 80.4
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 9.5e-95 350.5 219 81.3
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.6e-94 349.7 217 80.2
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.1e-94 349.4 217 81.1
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 3.6e-94 348.6 225 77.3
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 3.6e-94 348.6 214 80.4
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 4.7e-94 348.2 218 79.4
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 6.2e-94 347.8 213 80.3
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.2e-94 347.8 212 82.5
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 6.2e-94 347.8 219 80.8
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.4e-93 346.7 218 78.9
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.8e-93 346.3 225 74.7
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.8e-93 346.3 225 74.7
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 2.3e-93 345.9 217 79.3
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 3.1e-93 345.5 219 81.7
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 5.2e-93 344.7 247 73.3
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 5.2e-93 344.7 247 73.3
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 5.2e-93 344.7 219 79.9
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 5.2e-93 344.7 209 81.8
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 6.8e-93 344.4 219 78.5
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 8.9e-93 344.0 219 78.1
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 8.9e-93 344.0 228 75.9
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.5e-92 343.2 225 77.8
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.5e-92 343.2 225 77.8
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 2.0e-92 342.8 220 78.2
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 3.4e-92 342.0 223 80.3
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 5.8e-92 341.3 219 78.1
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 9.9e-92 340.5 214 78.0
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 9.9e-92 340.5 206 81.1
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.7e-91 339.7 214 77.6
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.7e-91 339.7 219 77.2
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 3.7e-91 338.6 210 80.5
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 3.7e-91 338.6 210 80.5
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 3.7e-91 338.6 219 77.6
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 4.9e-91 338.2 211 78.2
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 6.4e-91 337.8 210 80.0
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 6.4e-91 337.8 219 75.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 8.3e-91 337.4 219 76.7
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.1e-90 337.0 206 82.0
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.4e-90 336.7 229 74.2
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.9e-90 336.3 219 75.8
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 3.2e-90 335.5 207 80.7
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 4.1e-90 335.1 210 78.1
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 5.4e-90 334.7 207 79.7
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 5.4e-90 334.7 220 74.1
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 7.1e-90 334.3 209 79.4
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 7.1e-90 334.3 208 78.8
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 9.2e-90 334.0 210 78.6
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 2.7e-89 332.4 210 78.1
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 3.9e-88 328.6 225 75.6
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 6.6e-88 327.8 240 70.4
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 8.6e-88 327.4 208 76.9
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.5e-87 326.6 204 78.9
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 7.3e-87 324.3 236 71.6
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 9.6e-87 323.9 196 83.2
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.1e-85 318.9 196 80.6
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 5.8e-84 314.7 219 77.6
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 9.9e-84 313.9 219 75.3
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.9e-82 309.7 195 77.9
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 1.1e-79 300.4 197 78.7
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.8e-78 295.8 214 69.6
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.8e-78 295.0 183 78.1
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 2.9e-75 285.8 207 68.6
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 1.4e-74 283.5 206 67.5
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 4.2e-74 282.0 231 66.7
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.1e-73 279.6 219 70.3
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.1e-73 279.6 170 85.3
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.7e-73 279.3 207 68.1
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 2.3e-72 276.2 207 67.1
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 4.3e-71 271.9 221 64.7
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 9.6e-71 270.8 173 80.3
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 1.8e-69 266.5 202 72.3
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 4.0e-69 265.4 173 78.0
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.3e-64 249.6 154 85.1
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 2.4e-61 239.6 141 83.0
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.9e-58 229.9 137 87.6
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 4.3e-55 218.8 183 65.6
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.4e-53 213.0 138 81.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 5.7e-47 191.8 138 70.3
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 4.8e-46 188.7 113 83.2
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 2.2e-43 179.9 120 76.7
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.2e-36 157.5 136 65.4
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.3e-35 154.1 115 70.4
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.9e-35 152.9 108 73.1
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 6.7e-32 141.7 94 71.3
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 7.4e-31 138.3 204 37.7
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 1.7e-30 137.1 209 37.8
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 9.1e-29 131.3 197 36.5
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 3.0e-24 116.3 101 63.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 5.2e-24 115.5 101 62.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 1.1e-21 107.8 81 71.6
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.8e-21 107.1 57 80.7
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.9e-19 99.8 111 54.1
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 6.5e-19 98.6 85 54.1
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 2.6e-07 60.1 47 63.8


User provided reference genes

Program Settings