Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0260 Trochodendron aralioides HOM05D005126 ORTHO05D006169 9.9e-75 283.5 157 100.0
TAR624G1039 Trochodendron aralioides HOM05D005126 ORTHO05D006169 1.2e-59 233.4 157 82.2
Gohir.A10G017400 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.7e-45 186.4 157 68.2
Dinv17855 Davidia involucrata HOM05D005126 ORTHO05D006169 2.4e-44 182.6 156 69.2
Duzib160G0882 Durio zibethinus HOM05D005126 ORTHO05D006169 2.6e-43 179.1 155 69.0
DCAR_004173 Daucus carota HOM05D005126 ORTHO05D006169 5.9e-43 177.9 157 66.2
Duzib192G0985 Durio zibethinus HOM05D005126 ORTHO05D006169 1.7e-42 176.4 157 66.9
Haze_06662 Corylus avellana HOM05D005126 ORTHO05D006169 8.5e-42 174.1 157 66.2
Manes.15G164500 Manihot esculenta HOM05D005126 ORTHO05D006169 1.4e-41 173.3 156 66.7
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea HOM05D005126 ORTHO05D006169 4.2e-41 171.8 156 65.4
Cfa000280 Carpinus fangiana HOM05D005126 ORTHO05D006169 7.2e-41 171.0 157 65.6
Ciclev10007263m.g Citrus clementina HOM05D005126 ORTHO05D006169 7.2e-41 171.0 156 64.7
CANSAT35G0768 Cannabis sativa HOM05D005126 ORTHO05D006169 1.2e-40 170.2 155 61.9
CiPaw.09G152800 Carya illinoinensis HOM05D005126 ORTHO05D006169 1.2e-40 170.2 157 65.6
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea HOM05D005126 ORTHO05D006169 2.7e-40 169.1 156 64.7
CSS0033857 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 3.6e-40 168.7 159 64.2
RcHm_v2.0_Chr5g0004701 Rosa chinensis HOM05D005126 ORTHO05D006169 6.1e-40 167.9 153 64.1
MBI07_g11719_MAGBIO Magnolia biondii HOM05D005126 ORTHO05D006169 1.8e-39 166.4 153 64.1
Prupe.4G030200 Prunus persica HOM05D005126 ORTHO05D006169 1.8e-39 166.4 156 63.5
FvH4_3g03041 Fragaria vesca HOM05D005126 ORTHO05D006169 2.3e-39 166.0 153 62.7
Lj4g0001880 Lotus japonicus HOM05D005126 ORTHO05D006169 2.3e-39 166.0 156 63.5
Glyma.08G061700 Glycine max HOM05D005126 ORTHO05D006169 3.0e-39 165.6 157 65.6
CARHR050640 Cardamine hirsuta HOM05D005126 ORTHO05D006169 3.9e-39 165.2 154 63.0
Glyma.07G187500 Glycine max HOM05D005126 ORTHO05D006169 3.9e-39 165.2 156 65.4
Gohir.D06G212500 Gossypium hirsutum HOM05D005126 ORTHO05D006169 3.9e-39 165.2 155 60.6
Potri.011G032200 Populus trichocarpa HOM05D005126 ORTHO05D006169 3.9e-39 165.2 155 63.2
Gohir.A06G208600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 5.2e-39 164.9 155 60.6
Gorai.010G253600 Gossypium raimondii HOM05D005126 ORTHO05D006169 5.2e-39 164.9 155 60.6
MD10G1310700 Malus domestica HOM05D005126 ORTHO05D006169 6.7e-39 164.5 156 63.5
Phvul.002G219000 Phaseolus vulgaris HOM05D005126 ORTHO05D006169 8.8e-39 164.1 156 64.7
Sabra11G0025300 Salix brachista HOM05D005126 ORTHO05D006169 8.8e-39 164.1 155 61.9
vmacro03741 Vaccinium macrocarpon HOM05D005126 ORTHO05D006169 8.8e-39 164.1 157 63.7
AUR62006818 Chenopodium quinoa HOM05D005126 ORTHO05D006169 1.1e-38 163.7 157 61.1
Sabra11G0019400 Salix brachista HOM05D005126 ORTHO05D006169 2.0e-38 162.9 156 62.2
FAN21G2838 Fragaria x ananassa HOM05D005126 ORTHO05D006169 2.6e-38 162.5 153 62.1
VMungo0251G0970 Vigna mungo HOM05D005126 ORTHO05D006169 7.4e-38 161.0 156 64.7
Ca_18455_v3 Cicer arietinum L. HOM05D005126 ORTHO05D006169 1.3e-37 160.2 157 59.9
TWI63G0986 Tripterygium wilfordii HOM05D005126 ORTHO05D006169 2.2e-37 159.5 163 58.9
AL2G14430 Arabidopsis lyrata HOM05D005126 ORTHO05D006169 3.7e-37 158.7 161 61.5
Lj2C276T6 Lonicera japonica HOM05D005126 ORTHO05D006169 3.7e-37 158.7 165 62.4
Rhsim13G0163000 Rhododendron simsii HOM05D005126 ORTHO05D006169 3.7e-37 158.7 157 61.1
FAN25G0472 Fragaria x ananassa HOM05D005126 ORTHO05D006169 4.8e-37 158.3 153 63.4
Actinidia26962 Actinidia chinensis HOM05D005126 ORTHO05D006169 6.3e-37 157.9 156 63.5
CSS0041207 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 8.2e-37 157.5 157 59.9
TPR.G13921 Trifolium pratense HOM05D005126 ORTHO05D006169 1.1e-36 157.1 157 61.8
Carub.0002s0337 Capsella rubella HOM05D005126 ORTHO05D006169 1.4e-36 156.8 159 59.7
EL10Ac4g09560 Beta vulgaris HOM05D005126 ORTHO05D006169 2.4e-36 156.0 159 61.0
AT1G61690 Arabidopsis thaliana HOM05D005126 ORTHO05D006169 9.1e-36 154.1 163 59.5
Nitab4.5_0006456g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 2.0e-35 152.9 181 54.7
Thhalv10023224m.g Eutrema salsugineum HOM05D005126 ORTHO05D006169 2.6e-35 152.5 165 58.2
PGSC0003DMG400021720 Solanum tuberosum HOM05D005126 ORTHO05D006169 1.3e-34 150.2 181 53.6
Medtr4g092040 Medicago truncatula HOM05D005126 ORTHO05D006169 1.7e-34 149.8 155 60.6
Eucgr.H00119 Eucalyptus grandis HOM05D005126 ORTHO05D006169 2.9e-34 149.1 154 58.4
Nitab4.5_0000503g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 3.8e-34 148.7 181 54.7
PGR031G2928 Punica granatum HOM05D005126 ORTHO05D006169 5.0e-34 148.3 159 59.7
Psat7g105840 Pisum sativum HOM05D005126 ORTHO05D006169 6.5e-34 147.9 157 59.2
Sp2g02860 Schrenkiella parvula HOM05D005126 ORTHO05D006169 1.1e-33 147.1 165 55.2
Aqoxy4G01910 Aquilegia oxysepala HOM05D005126 ORTHO05D006169 1.9e-33 146.4 155 57.4
BraA01t03188Z Brassica rapa HOM05D005126 ORTHO05D006169 9.4e-33 144.1 165 55.2
Oeu015946.3 Olea europaea HOM05D005126 ORTHO05D006169 9.4e-33 144.1 156 58.3
C01p38950 Brassica napus HOM05D005126 ORTHO05D006169 1.2e-32 143.7 165 55.2
BolC1t03845H Brassica oleracea HOM05D005126 ORTHO05D006169 1.2e-32 143.7 165 55.2
Peaxi162Scf00931g00055 Petunia axillaris HOM05D005126 ORTHO05D006169 1.6e-32 143.3 181 53.0
Actinidia05547 Actinidia chinensis HOM05D005126 ORTHO05D006169 2.1e-32 142.9 149 61.1
Atru.chr10.2054 Acer truncatum HOM05D005126 ORTHO05D006169 3.6e-32 142.1 135 63.7
A01p30560 Brassica napus HOM05D005126 ORTHO05D006169 3.6e-32 142.1 165 54.5
Lalb_Chr09g0327171 Lupinus albus HOM05D005126 ORTHO05D006169 3.6e-32 142.1 156 55.8
ATR0804G089 Amborella trichopoda HOM05D005126 ORTHO05D006169 4.7e-32 141.7 169 52.7
SalBow4G2671 Salvia bowleyana HOM05D005126 ORTHO05D006169 4.7e-32 141.7 155 60.0
ECA236G2220 Erigeron canadensis HOM05D005126 ORTHO05D006169 6.1e-32 141.4 171 53.8
Ah.06g190720 Amaranthus hybridus HOM05D005126 ORTHO05D006169 8.0e-32 141.0 164 57.3
MSTRG.4220 Avicennia marina HOM05D005126 ORTHO05D006169 1.0e-31 140.6 156 57.7
Aa31LG2G9130 Aethionema arabicum HOM05D005126 ORTHO05D006169 1.4e-31 140.2 155 55.5
Sc05g0008390 Simmondsia chinensis HOM05D005126 ORTHO05D006169 1.8e-31 139.8 157 56.7
Sopen02g024620 Solanum pennellii HOM05D005126 ORTHO05D006169 3.0e-31 139.0 181 51.9
Hund23540 Selenicereus undatus HOM05D005126 ORTHO05D006169 4.0e-31 138.7 155 56.1
CDE01G0539 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 5.2e-31 138.3 155 55.5
MELO3C007347.2 Cucumis melo HOM05D005126 ORTHO05D006169 6.7e-31 137.9 160 57.5
Nn1g03751 Nelumbo nucifera HOM05D005126 ORTHO05D006169 1.2e-30 137.1 157 58.0
Oeu030881.1 Olea europaea HOM05D005126 ORTHO05D006169 2.6e-30 136.0 157 56.1
CsaV3_6G049470 Cucumis sativus L. HOM05D005126 ORTHO05D006169 3.3e-30 135.6 156 59.6
AUR62000477 Chenopodium quinoa HOM05D005126 ORTHO05D006169 4.4e-30 135.2 138 56.5
HanXRQChr05g0130831 Helianthus annuus HOM05D005126 ORTHO05D006169 9.7e-30 134.0 165 54.5
Sed0023382 Sechium edule HOM05D005126 ORTHO05D006169 9.7e-30 134.0 163 54.0
Zm00001eb245580 Zea mays HOM05D005126 ORTHO05D006169 9.7e-30 134.0 168 54.2
SEGI_24274 Sequoiadendron giganteum HOM05D005126 ORTHO05D006169 2.8e-29 132.5 179 50.3
GSVIVG01002717001 Vitis vinifera HOM05D005126 ORTHO05D006169 3.7e-29 132.1 148 55.4
Lsat_1_v5_gn_7_18540 Lactuca sativa HOM05D005126 ORTHO05D006169 4.8e-29 131.7 158 54.4
Potri.004G030500 Populus trichocarpa HOM05D005126 ORTHO05D006169 1.8e-28 129.8 154 52.6
COL.COLO4_33008 Corchorus olitorius HOM05D005126 ORTHO05D006169 1.2e-27 127.1 138 57.2
Migut.N00381 Erythranthe guttata HOM05D005126 ORTHO05D006169 1.6e-27 126.7 157 52.2
Cpa.g.sc871.1 Carica papaya HOM05D005126 ORTHO05D006169 3.5e-27 125.6 151 54.3
unitig_736.g22481 Utricularia gibba HOM05D005126 ORTHO05D006169 4.5e-27 125.2 159 51.6
PSO832G1831 Papaver somniferum HOM05D005126 ORTHO05D006169 1.7e-26 123.2 154 53.2
CAN.G424.91 Capsicum annuum HOM05D005126 ORTHO05D006169 2.5e-25 119.4 178 47.8
Cc02_g11860 Coffea canephora HOM05D005126 ORTHO05D006169 2.5e-25 119.4 154 51.9
PSO210G4646 Papaver somniferum HOM05D005126 ORTHO05D006169 3.6e-24 115.5 154 51.3
THA.LOC104809525 Tarenaya hassleriana HOM05D005126 ORTHO05D006169 1.8e-23 113.2 137 53.3
ClCG01G022310 Citrullus lanatus HOM05D005126 ORTHO05D006169 2.3e-23 112.8 160 50.0
Gohir.D10G017600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 6.8e-23 111.3 95 64.2
Gorai.011G019500 Gossypium raimondii HOM05D005126 ORTHO05D006169 6.8e-23 111.3 95 64.2
Pp3c16_8350 Physcomitrium patens HOM05D005126 ORTHO05D006169 3.4e-22 109.0 183 43.2
SGA_v2.0_scaffold216G42402 Striga asiatica HOM05D005126 ORTHO05D006169 3.4e-22 109.0 157 48.4
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis HOM05D005126 ORTHO05D006169 5.7e-22 108.2 170 47.6
BcaB04g20360 Brassica carinata HOM05D005126 ORTHO05D006169 1.7e-21 106.7 160 46.2
BcaB04g20363 Brassica carinata HOM05D005126 ORTHO05D006169 3.7e-21 105.5 160 45.6
SMO141G0003 Selaginella moellendorffii HOM05D005126 ORTHO05D006169 3.1e-20 102.4 148 48.6
GSVIVG01006464001 Vitis vinifera HOM05D005126 ORTHO05D006169 7.0e-20 101.3 155 45.8
QL05p077365 Quercus lobata HOM05D005126 ORTHO05D006169 1.3e-18 97.1 155 47.1
CDE12G0347 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 1.6e-16 90.1 113 50.4
MELO3C007345.2 Cucumis melo HOM05D005126 ORTHO05D006169 1.2e-14 84.0 157 43.9
Mapoly0032s0118 Marchantia polymorpha HOM05D005126 ORTHO05D006169 1.5e-14 83.6 268 30.6
Prupe.4G011500 Prunus persica HOM05D005126 ORTHO05D006169 1.5e-14 83.6 90 60.0
BcaB04g20358 Brassica carinata HOM05D005126 ORTHO05D006169 1.3e-13 80.5 146 42.5
FvH4_3g03071 Fragaria vesca HOM05D005126 ORTHO05D006169 3.7e-13 79.0 122 43.4
FAN25G1652 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.8e-12 76.6 63 68.3
GSVIVG01006404001 Vitis vinifera HOM05D005126 ORTHO05D006169 8.6e-10 67.8 172 35.5
Os03g0669800 Oryza sativa ssp. japonica HOM05D005126 ORTHO05D006169 2.5e-09 66.2 176 32.4
Thecc.06G207200 Theobroma cacao HOM05D005126 ORTHO05D006169 5.6e-09 65.1 187 31.0
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla HOM05D005126 ORTHO05D006169 4.7e-08 62.0 42 78.6
Atru.chr10.2052 Acer truncatum HOM05D005126 ORTHO05D006169 1.2e-06 57.4 189 29.6
CBR_g52260 Chara braunii HOM05D005126 ORTHO05D006169 1.5e-06 57.0 171 33.3
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.5e-06 57.0 188 31.9
Cpa.g.c45157 Carica papaya HOM05D005126 ORTHO05D006169 2.0e-06 56.6 187 29.9


User provided reference genes

Program Settings