Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 2.5e-276 954.9 504 100.0
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 1.3e-171 607.1 503 62.8
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 4.1e-170 602.1 510 60.6
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 5.3e-170 601.7 510 61.4
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 5.3e-170 601.7 516 61.2
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.3e-168 597.0 511 61.4
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 5.1e-165 585.1 510 59.0
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 6.9e-162 574.7 510 59.2
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 2.1e-158 563.1 514 58.4
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 1.8e-157 560.1 511 58.5
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 8.8e-157 557.8 524 58.6
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 3.3e-156 555.8 520 57.7
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 9.7e-156 554.3 501 59.1
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 3.7e-155 552.4 505 56.0
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 6.9e-154 548.1 518 56.9
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 7.7e-153 544.7 504 57.7
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.2e-152 543.1 509 56.8
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 5.0e-152 542.0 510 56.7
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 5.0e-152 542.0 505 55.8
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 1.9e-151 540.0 513 57.1
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 4.7e-150 535.4 521 55.9
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 3.0e-149 532.7 506 55.1
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 2.0e-148 530.0 511 55.6
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 4.4e-148 528.9 508 56.7
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 7.4e-148 528.1 521 55.1
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 3.7e-147 525.8 510 55.7
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 6.3e-147 525.0 489 55.6
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.1e-146 524.2 507 55.8
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.4e-146 523.9 489 55.4
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 5.3e-146 521.9 505 55.0
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 5.5e-143 511.9 505 53.3
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 1.2e-142 510.8 416 64.7
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 3.0e-141 506.1 511 53.0
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 5.7e-140 501.9 513 53.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 3.7e-139 499.2 510 52.5
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 2.2e-136 490.0 510 51.4
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 2.9e-136 489.6 510 54.1
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 5.0e-136 488.8 505 50.9
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 7.2e-135 485.0 506 51.0
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 3.0e-133 479.6 508 52.2
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 4.0e-133 479.2 487 50.5
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 5.2e-133 478.8 513 50.3
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 2.0e-132 476.9 431 56.6
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 6.3e-131 471.9 438 57.3
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 5.4e-130 468.8 432 58.1
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.6e-129 467.2 509 49.7
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 2.7e-129 466.5 507 51.5
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 6.1e-126 455.3 511 48.5
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 3.0e-125 453.0 520 47.3
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 4.4e-124 449.1 507 47.1
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.2e-121 441.0 508 47.8
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 3.5e-121 439.5 511 48.3
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 4.5e-121 439.1 515 47.8
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 5.9e-121 438.7 513 46.2
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-120 437.6 415 56.1
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.7e-120 437.2 415 56.9
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 1.7e-120 437.2 421 55.3
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 4.3e-119 432.6 516 46.9
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 9.5e-119 431.4 513 45.6
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 9.5e-119 431.4 513 45.4
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.6e-118 430.6 513 45.6
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 2.8e-118 429.9 520 49.6
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 4.7e-118 429.1 420 54.0
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 8.0e-118 428.3 511 47.9
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 1.4e-117 427.6 513 47.8
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.2e-116 424.5 516 45.5
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 4.9e-115 419.1 421 54.4
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 1.8e-114 417.2 448 47.3
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 3.1e-109 399.8 517 45.3
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 9.8e-108 394.8 415 50.6
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.7e-102 375.9 295 63.4
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 3.8e-91 339.7 554 39.0
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 6.0e-89 332.4 377 50.4
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 1.3e-88 331.3 468 42.9
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 3.6e-86 323.2 567 38.8
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 3.1e-85 320.1 249 64.3
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 1.5e-71 274.6 501 33.3
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 3.7e-70 270.0 505 33.9
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 1.9e-42 177.9 478 27.4
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.2e-38 164.5 159 53.5
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 2.5e-34 151.0 441 26.8
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 8.0e-33 146.0 119 63.0
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 7.7e-20 102.8 249 32.1
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 3.6e-17 94.0 449 25.8
SMO302G0010 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 1.7e-06 58.5 91 36.3


User provided reference genes

Program Settings