Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0188 Trochodendron aralioides HOM05D003951 ORTHO05D005378 5.1e-145 517.7 257 100.0
TAR383G0035 Trochodendron aralioides HOM05D003951 ORTHO05D005378 1.4e-126 456.4 256 89.5
Aqoxy7G01531 Aquilegia oxysepala HOM05D003951 ORTHO05D005378 1.0e-124 450.3 256 86.3
GSVIVG01035648001 Vitis vinifera HOM05D003951 ORTHO05D005378 9.4e-123 443.7 256 85.2
CiPaw.08G024600 Carya illinoinensis HOM05D003951 ORTHO05D005378 3.6e-122 441.8 257 84.4
MBI04_g14936_MAGBIO Magnolia biondii HOM05D003951 ORTHO05D005378 6.7e-121 437.6 254 84.3
Cpa.g.sc7.257 Carica papaya HOM05D003951 ORTHO05D005378 1.5e-120 436.4 255 82.7
Cfa013355 Carpinus fangiana HOM05D003951 ORTHO05D005378 2.0e-120 436.0 257 82.9
QL12p029450 Quercus lobata HOM05D003951 ORTHO05D005378 2.0e-120 436.0 255 84.3
Gorai.010G108200 Gossypium raimondii HOM05D003951 ORTHO05D005378 3.3e-120 435.3 257 82.9
Gohir.A06G094100 Gossypium hirsutum HOM05D003951 ORTHO05D005378 4.4e-120 434.9 257 82.5
Atru.chr7.2135 Acer truncatum HOM05D003951 ORTHO05D005378 7.5e-120 434.1 256 80.9
Nn2g11661 Nelumbo nucifera HOM05D003951 ORTHO05D005378 9.7e-120 433.7 255 82.4
Thecc.09G042400 Theobroma cacao HOM05D003951 ORTHO05D005378 9.7e-120 433.7 256 82.8
Gohir.D06G093700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 1.7e-119 433.0 257 82.5
Gohir.D13G192700 Gossypium hirsutum HOM05D003951 ORTHO05D005378 1.7e-119 433.0 256 80.9
Hma1.2p1_0590F.1_g185010 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 2.8e-119 432.2 257 82.1
Lj1g0011830 Lotus japonicus HOM05D003951 ORTHO05D005378 2.8e-119 432.2 256 80.1
Manes.03G061800 Manihot esculenta HOM05D003951 ORTHO05D005378 2.8e-119 432.2 256 83.2
Dinv30270 Davidia involucrata HOM05D003951 ORTHO05D005378 3.7e-119 431.8 256 82.8
Prupe.1G450600 Prunus persica HOM05D003951 ORTHO05D005378 6.3e-119 431.0 257 82.5
Dinv14244 Davidia involucrata HOM05D003951 ORTHO05D005378 1.4e-118 429.9 256 81.2
Glyma.06G083700 Glycine max HOM05D003951 ORTHO05D005378 1.8e-118 429.5 256 79.3
Gohir.A13G186000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 3.1e-118 428.7 256 80.9
Gorai.013G218700 Gossypium raimondii HOM05D003951 ORTHO05D005378 4.1e-118 428.3 256 80.1
PGR044G0887 Punica granatum HOM05D003951 ORTHO05D005378 4.1e-118 428.3 256 80.9
VMungo1309G1090 Vigna mungo HOM05D003951 ORTHO05D005378 9.1e-118 427.2 256 78.9
CSS0015540 Camellia sinensis var. sinensis HOM05D003951 ORTHO05D005378 1.2e-117 426.8 256 82.4
COL.COLO4_18674 Corchorus olitorius HOM05D003951 ORTHO05D005378 2.0e-117 426.0 256 81.6
CANSAT25G2930 Cannabis sativa HOM05D003951 ORTHO05D005378 4.5e-117 424.9 256 80.5
Glyma.04G082000 Glycine max HOM05D003951 ORTHO05D005378 7.7e-117 424.1 257 78.6
TWI32G0786 Tripterygium wilfordii HOM05D003951 ORTHO05D005378 1.3e-116 423.3 256 78.9
Haze_16526 Corylus avellana HOM05D003951 ORTHO05D005378 1.7e-116 422.9 257 80.9
Potri.018G039800 Populus trichocarpa HOM05D003951 ORTHO05D005378 1.7e-116 422.9 255 80.4
Lalb_Chr23g0269551 Lupinus albus HOM05D003951 ORTHO05D005378 2.9e-116 422.2 256 78.1
Lalb_Chr08g0243161 Lupinus albus HOM05D003951 ORTHO05D005378 3.8e-116 421.8 256 77.3
Ciclev10007348m.g Citrus clementina HOM05D003951 ORTHO05D005378 6.5e-116 421.0 257 79.4
Lj8A588G18 Lonicera japonica HOM05D003951 ORTHO05D005378 6.5e-116 421.0 257 78.6
Ca_15606_v3 Cicer arietinum L. HOM05D003951 ORTHO05D005378 8.5e-116 420.6 256 77.7
Eucgr.C02905 Eucalyptus grandis HOM05D003951 ORTHO05D005378 8.5e-116 420.6 256 79.7
Gohir.D08G272000 Gossypium hirsutum HOM05D003951 ORTHO05D005378 1.1e-115 420.2 256 81.2
Gorai.004G290400 Gossypium raimondii HOM05D003951 ORTHO05D005378 1.1e-115 420.2 256 81.2
Phvul.009G107800 Phaseolus vulgaris HOM05D003951 ORTHO05D005378 1.5e-115 419.9 256 77.3
Psat5g022720 Pisum sativum HOM05D003951 ORTHO05D005378 1.5e-115 419.9 256 78.1
Gohir.A08G250500 Gossypium hirsutum HOM05D003951 ORTHO05D005378 3.2e-115 418.7 256 81.2
RcHm_v2.0_Chr6g0305971 Rosa chinensis HOM05D003951 ORTHO05D005378 4.2e-115 418.3 257 80.2
TPR.G1335 Trifolium pratense HOM05D003951 ORTHO05D005378 5.5e-115 417.9 256 77.3
Medtr3g110090 Medicago truncatula HOM05D003951 ORTHO05D005378 7.2e-115 417.5 256 77.3
Medtr3g110140 Medicago truncatula HOM05D003951 ORTHO05D005378 7.2e-115 417.5 256 77.3
Potri.006G240300 Populus trichocarpa HOM05D003951 ORTHO05D005378 7.2e-115 417.5 255 78.8
Duzib187G0774 Durio zibethinus HOM05D003951 ORTHO05D005378 1.2e-114 416.8 263 78.7
arahy.Tifrunner.gnm1.ann1.ZA6ZKK Arachis hypogaea HOM05D003951 ORTHO05D005378 1.6e-114 416.4 256 77.7
PSO210G0075 Papaver somniferum HOM05D003951 ORTHO05D005378 2.1e-114 416.0 256 79.3
PSO210G7231 Papaver somniferum HOM05D003951 ORTHO05D005378 2.1e-114 416.0 256 79.3
MD15G1095600 Malus domestica HOM05D003951 ORTHO05D005378 6.1e-114 414.5 257 79.4
MD08G1115900 Malus domestica HOM05D003951 ORTHO05D005378 1.0e-113 413.7 257 79.4
Sabra18G0039700 Salix brachista HOM05D003951 ORTHO05D005378 1.4e-113 413.3 256 79.3
Sabra06G0187900 Salix brachista HOM05D003951 ORTHO05D005378 1.8e-113 412.9 255 77.6
FAN20G1017 Fragaria x ananassa HOM05D003951 ORTHO05D005378 2.3e-113 412.5 257 79.0
THA.LOC104814774 Tarenaya hassleriana HOM05D003951 ORTHO05D005378 3.0e-113 412.1 256 76.6
arahy.Tifrunner.gnm1.ann1.6KB6B4 Arachis hypogaea HOM05D003951 ORTHO05D005378 4.0e-113 411.8 256 77.0
FAN15G0863 Fragaria x ananassa HOM05D003951 ORTHO05D005378 5.2e-113 411.4 257 78.6
Hund19527 Selenicereus undatus HOM05D003951 ORTHO05D005378 8.8e-113 410.6 257 77.4
FvH4_2g35850 Fragaria vesca HOM05D003951 ORTHO05D005378 1.2e-112 410.2 257 78.2
Thhalv10012570m.g Eutrema salsugineum HOM05D003951 ORTHO05D005378 2.6e-112 409.1 257 76.7
CDE09G1231 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 4.4e-112 408.3 256 75.0
FAN27G3265 Fragaria x ananassa HOM05D003951 ORTHO05D005378 5.7e-112 407.9 257 78.2
Migut.J00480 Erythranthe guttata HOM05D003951 ORTHO05D005378 7.5e-112 407.5 257 76.3
MSTRG.19211 Avicennia marina HOM05D003951 ORTHO05D005378 1.7e-111 406.4 257 75.1
Sp6g32040 Schrenkiella parvula HOM05D003951 ORTHO05D005378 2.2e-111 406.0 257 76.3
DCAR_004489 Daucus carota HOM05D003951 ORTHO05D005378 3.7e-111 405.2 257 75.5
CANSAT56G0789 Cannabis sativa HOM05D003951 ORTHO05D005378 1.1e-110 403.7 257 77.8
CANSAT56G2409 Cannabis sativa HOM05D003951 ORTHO05D005378 1.1e-110 403.7 257 77.8
ClCG08G012310 Citrullus lanatus HOM05D003951 ORTHO05D005378 1.1e-110 403.7 257 74.7
MELO3C011151.2 Cucumis melo HOM05D003951 ORTHO05D005378 1.8e-110 402.9 257 75.5
Peaxi162Scf01195g00118 Petunia axillaris HOM05D003951 ORTHO05D005378 1.8e-110 402.9 256 75.8
Nitab4.5_0010350g0010 Nicotiana tabacum HOM05D003951 ORTHO05D005378 2.4e-110 402.5 256 76.6
Oeu038879.1 Olea europaea HOM05D003951 ORTHO05D005378 2.4e-110 402.5 257 75.5
Ah.16g105540 Amaranthus hybridus HOM05D003951 ORTHO05D005378 3.1e-110 402.1 256 75.0
ECA233G3193 Erigeron canadensis HOM05D003951 ORTHO05D005378 4.1e-110 401.7 255 73.7
Oeu017004.2 Olea europaea HOM05D003951 ORTHO05D005378 4.1e-110 401.7 257 74.7
Ah.16g105420 Amaranthus hybridus HOM05D003951 ORTHO05D005378 7.0e-110 401.0 256 75.0
Nitab4.5_0008726g0020 Nicotiana tabacum HOM05D003951 ORTHO05D005378 7.0e-110 401.0 256 76.2
Sed0007642 Sechium edule HOM05D003951 ORTHO05D005378 9.1e-110 400.6 257 74.7
Sc23g0005190 Simmondsia chinensis HOM05D003951 ORTHO05D005378 9.1e-110 400.6 256 74.2
EL10Ac2g04048 Beta vulgaris HOM05D003951 ORTHO05D005378 1.2e-109 400.2 256 74.2
CsaV3_2G030980 Cucumis sativus L. HOM05D003951 ORTHO05D005378 1.2e-109 400.2 257 74.7
vmacro10453 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 1.2e-109 400.2 256 76.2
BolC2t06471H Brassica oleracea HOM05D003951 ORTHO05D005378 1.6e-109 399.8 256 75.0
Nitab4.5_0000132g0420 Nicotiana tabacum HOM05D003951 ORTHO05D005378 1.6e-109 399.8 255 76.1
BcaNung01934 Brassica carinata HOM05D003951 ORTHO05D005378 2.7e-109 399.1 257 74.7
AUR62009306 Chenopodium quinoa HOM05D003951 ORTHO05D005378 2.7e-109 399.1 256 73.4
C02p05210 Brassica napus HOM05D003951 ORTHO05D005378 3.5e-109 398.7 257 74.3
Carub.0006s1003 Capsella rubella HOM05D003951 ORTHO05D005378 5.9e-109 397.9 257 73.9
Lj7A704G78 Lonicera japonica HOM05D003951 ORTHO05D005378 5.9e-109 397.9 256 75.0
SGA_v2.0_scaffold40G15445 Striga asiatica HOM05D003951 ORTHO05D005378 1.3e-108 396.7 275 70.9
SGA_v2.0_scaffold657G53382 Striga asiatica HOM05D003951 ORTHO05D005378 1.3e-108 396.7 275 70.9
CAN.G1759.1 Capsicum annuum HOM05D003951 ORTHO05D005378 2.2e-108 396.0 256 74.2
CARHR201660 Cardamine hirsuta HOM05D003951 ORTHO05D005378 2.2e-108 396.0 257 74.3
Solyc09g008610.4 Solanum lycopersicum HOM05D003951 ORTHO05D005378 2.2e-108 396.0 255 74.5
BcaC03g13375 Brassica carinata HOM05D003951 ORTHO05D005378 2.9e-108 395.6 257 74.3
Sed0024259 Sechium edule HOM05D003951 ORTHO05D005378 2.9e-108 395.6 257 73.2
A02p01070 Brassica napus HOM05D003951 ORTHO05D005378 3.8e-108 395.2 257 74.3
BraA02t05087Z Brassica rapa HOM05D003951 ORTHO05D005378 3.8e-108 395.2 257 74.3
AT5G11560 Arabidopsis thaliana HOM05D003951 ORTHO05D005378 5.0e-108 394.8 257 73.2
AUR62043518 Chenopodium quinoa HOM05D003951 ORTHO05D005378 5.0e-108 394.8 256 73.0
Cc06_g04830 Coffea canephora HOM05D003951 ORTHO05D005378 6.5e-108 394.4 256 73.0
Nitab4.5_0004281g0080 Nicotiana tabacum HOM05D003951 ORTHO05D005378 6.5e-108 394.4 256 75.8
Sopen09g003410 Solanum pennellii HOM05D003951 ORTHO05D005378 8.5e-108 394.0 255 74.1
AUR62041721 Chenopodium quinoa HOM05D003951 ORTHO05D005378 1.9e-107 392.9 256 72.7
AL6G22230 Arabidopsis lyrata HOM05D003951 ORTHO05D005378 2.5e-107 392.5 257 72.8
Ah.10g035090 Amaranthus hybridus HOM05D003951 ORTHO05D005378 2.7e-106 389.0 256 71.5
Aa31LG3G15640 Aethionema arabicum HOM05D003951 ORTHO05D005378 4.7e-106 388.3 257 72.4
Lsat_1_v5_gn_6_63741 Lactuca sativa HOM05D003951 ORTHO05D005378 4.7e-106 388.3 256 72.7
A10p26200 Brassica napus HOM05D003951 ORTHO05D005378 6.1e-106 387.9 257 73.5
BraA10t44677Z Brassica rapa HOM05D003951 ORTHO05D005378 6.1e-106 387.9 257 73.5
PGSC0003DMG400012982 Solanum tuberosum HOM05D003951 ORTHO05D005378 6.1e-106 387.9 255 74.1
ATR0315G102 Amborella trichopoda HOM05D003951 ORTHO05D005378 1.4e-105 386.7 257 73.9
BcaB08g37043 Brassica carinata HOM05D003951 ORTHO05D005378 2.3e-105 386.0 257 73.5
SalBow3G1921 Salvia bowleyana HOM05D003951 ORTHO05D005378 3.0e-105 385.6 256 72.3
SHI18663 Sapria himalayana HOM05D003951 ORTHO05D005378 4.0e-105 385.2 257 71.2
BcaC04g19214 Brassica carinata HOM05D003951 ORTHO05D005378 7.5e-104 380.9 257 73.2
C09p65250 Brassica napus HOM05D003951 ORTHO05D005378 7.5e-104 380.9 257 73.2
BolC9t59353H Brassica oleracea HOM05D003951 ORTHO05D005378 7.5e-104 380.9 257 73.2
Os05g0230600 Oryza sativa ssp. japonica HOM05D003951 ORTHO05D005378 4.9e-103 378.3 256 69.5
HanXRQChr08g0221151 Helianthus annuus HOM05D003951 ORTHO05D005378 1.4e-102 376.7 257 73.2
Zm00001eb350390 Zea mays HOM05D003951 ORTHO05D005378 3.5e-101 372.1 257 68.1
Zm00001eb284300 Zea mays HOM05D003951 ORTHO05D005378 7.7e-101 370.9 256 68.4
Pp3c24_6940 Physcomitrium patens HOM05D003951 ORTHO05D005378 3.5e-85 318.9 252 59.9
CDE02G1137 Ceratophyllum demersum HOM05D003951 ORTHO05D005378 3.0e-84 315.8 196 75.5
Mapoly0001s0045 Marchantia polymorpha HOM05D003951 ORTHO05D005378 2.5e-83 312.8 256 60.2
AagrBONN_evm.TU.Sc2ySwM_228.1359 Anthoceros agrestis HOM05D003951 ORTHO05D005378 2.6e-80 302.8 250 58.8
SMO361G0709 Selaginella moellendorffii HOM05D003951 ORTHO05D005378 5.2e-73 278.5 253 53.4
Actinidia14667 Actinidia chinensis HOM05D003951 ORTHO05D005378 3.8e-71 272.3 173 76.9
HPP92_003925 Vanilla planifolia HOM05D003951 ORTHO05D005378 3.5e-61 239.2 165 73.9
vmacro07087 Vaccinium macrocarpon HOM05D003951 ORTHO05D005378 6.4e-55 218.4 223 57.4
CBR_g46228 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-52 208.4 255 45.9
Actinidia15735 Actinidia chinensis HOM05D003951 ORTHO05D005378 5.8e-40 168.7 157 58.0
Psat2g043440 Pisum sativum HOM05D003951 ORTHO05D005378 1.6e-34 150.6 90 76.7
Ah.16g105530 Amaranthus hybridus HOM05D003951 ORTHO05D005378 6.3e-34 148.7 162 50.6
Lj6g0012970 Lotus japonicus HOM05D003951 ORTHO05D006115 1.8e-33 147.1 84 82.1
Cre01.g042550 Chlamydomonas reinhardtii HOM05D003951 ORTHO05D005378 3.7e-26 122.9 241 35.3
Actinidia14668 Actinidia chinensis HOM05D003951 ORTHO05D005378 2.7e-21 106.7 60 85.0
PRCOL_00001466 Prasinoderma coloniale HOM05D003951 ORTHO05D005378 1.0e-20 104.8 145 38.6
EL10Ac6g13930 Beta vulgaris HOM05D001881 ORTHO05D001856 4.4e-19 99.4 62 74.2
TAR629G0021 Trochodendron aralioides HOM05D003951 ORTHO05D000285 1.2e-16 91.3 48 89.6
Peaxi162Scf00110g00823 Petunia axillaris HOM05D003951 ORTHO05D305850 6.5e-15 85.5 120 41.7
Ah.04g157730 Amaranthus hybridus HOM05D031501 ORTHO05D060762 1.3e-07 61.2 37 78.4
Hma1.2p1_1163F.1_g262790 Hydrangea macrophylla HOM05D003951 ORTHO05D005378 5.0e-07 59.3 37 70.3


User provided reference genes

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