Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0173 Trochodendron aralioides HOM05D005797 ORTHO05D006479 1.4e-56 222.6 103 100.0
TAR629G0979 Trochodendron aralioides HOM05D005797 ORTHO05D006479 6.6e-19 97.4 54 79.6
Nn4g22471 Nelumbo nucifera HOM05D005797 ORTHO05D006479 7.3e-18 94.0 54 72.2
Ciclev10023279m.g Citrus clementina HOM05D005797 ORTHO05D006479 2.6e-15 85.5 54 68.5
Nn3g16589 Nelumbo nucifera HOM05D005797 ORTHO05D006479 3.4e-15 85.1 54 64.8
Sed0007512 Sechium edule HOM05D005797 ORTHO05D006479 1.7e-14 82.8 53 64.2
CiPaw.11G012700 Carya illinoinensis HOM05D005797 ORTHO05D006479 2.9e-14 82.0 54 66.7
Dinv38477 Davidia involucrata HOM05D005797 ORTHO05D006479 1.1e-13 80.1 53 62.3
CSS0028554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.9e-13 79.3 51 64.7
CSS0048062 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 5.4e-13 77.8 51 64.7
ClCG03G003480 Citrullus lanatus HOM05D005797 ORTHO05D006479 7.1e-13 77.4 71 47.9
CSS0021207 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 2.7e-12 75.5 51 60.8
CSS0032554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 2.7e-12 75.5 51 60.8
Lj5A100T65 Lonicera japonica HOM05D005797 ORTHO05D006479 6.0e-12 74.3 53 62.3
QL10p005358 Quercus lobata HOM05D005797 ORTHO05D006479 1.3e-11 73.2 54 57.4
GSVIVG01007552001 Vitis vinifera HOM05D005797 ORTHO05D006479 2.3e-11 72.4 51 58.8
vmacro21190 Vaccinium macrocarpon HOM05D005797 ORTHO05D006479 3.0e-11 72.0 53 52.8
Hund05637 Selenicereus undatus HOM05D005797 ORTHO05D006479 3.9e-11 71.6 51 58.8
CANSAT80G2591 Cannabis sativa HOM05D005797 ORTHO05D006479 5.1e-11 71.2 53 54.7
PSO063G1422 Papaver somniferum HOM05D005797 ORTHO05D006479 6.6e-11 70.9 50 58.0
Prupe.5G157600 Prunus persica HOM05D005797 ORTHO05D006479 6.6e-11 70.9 53 62.3
MELO3C002331.2 Cucumis melo HOM05D005797 ORTHO05D006479 1.5e-10 69.7 53 56.6
CsaV3_1G009280 Cucumis sativus L. HOM05D005797 ORTHO05D006479 1.5e-10 69.7 53 56.6
Hund05636 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.9e-10 69.3 51 56.9
MD06G1157600 Malus domestica HOM05D005797 ORTHO05D006479 3.3e-10 68.6 55 54.5
Prupe.5G155300 Prunus persica HOM05D005797 ORTHO05D006479 3.3e-10 68.6 54 59.3
Hund05629 Selenicereus undatus HOM05D005797 ORTHO05D006479 4.3e-10 68.2 49 59.2
Atru.chr9.1003 Acer truncatum HOM05D005797 ORTHO05D006479 5.6e-10 67.8 54 57.4
PSO478G0449 Papaver somniferum HOM05D005797 ORTHO05D006479 5.6e-10 67.8 50 56.0
Sed0027282 Sechium edule HOM05D005797 ORTHO05D006479 9.6e-10 67.0 54 51.9
Aqoxy3G01381 Aquilegia oxysepala HOM05D005797 ORTHO05D006479 1.3e-09 66.6 53 52.8
Hund05642 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.3e-09 66.6 51 56.9
AUR62025735 Chenopodium quinoa HOM05D005797 ORTHO05D006479 2.1e-09 65.9 52 55.8
EL10Ac7g18068 Beta vulgaris HOM05D005797 ORTHO05D006479 2.8e-09 65.5 52 50.0
Haze_07281 Corylus avellana HOM05D005797 ORTHO05D006479 6.2e-09 64.3 54 55.6
MBI11_g20093_MAGBIO Magnolia biondii HOM05D005797 ORTHO05D006479 6.2e-09 64.3 55 45.5
Hund18537 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.4e-08 63.2 54 53.7
RcHm_v2.0_Chr7g0191351 Rosa chinensis HOM05D005797 ORTHO05D006479 1.8e-08 62.8 53 52.8
Eucgr.K02760 Eucalyptus grandis HOM05D005797 ORTHO05D006479 3.1e-08 62.0 55 52.7
Lalb_Chr23g0273471 Lupinus albus HOM05D005797 ORTHO05D006479 3.1e-08 62.0 53 50.9
Phvul.009G169300 Phaseolus vulgaris HOM05D005797 ORTHO05D006479 4.0e-08 61.6 44 59.1
SalBow1G3539 Salvia bowleyana HOM05D005797 ORTHO05D006479 4.0e-08 61.6 56 42.9
AUR62001271 Chenopodium quinoa HOM05D005797 ORTHO05D006479 5.3e-08 61.2 45 57.8
Os02g0598200 Oryza sativa ssp. japonica HOM05D005797 ORTHO05D006479 5.3e-08 61.2 46 54.3
Rhsim01G0114700 Rhododendron simsii HOM05D005797 ORTHO05D006479 5.3e-08 61.2 45 53.3
PGR044G0013 Punica granatum HOM05D005797 ORTHO05D006479 6.9e-08 60.8 53 45.3
FvH4_5g07280 Fragaria vesca HOM05D005797 ORTHO05D006479 9.0e-08 60.5 53 49.1
FAN08G2881 Fragaria x ananassa HOM05D005797 ORTHO05D006479 9.0e-08 60.5 53 49.1
FAN13G0931 Fragaria x ananassa HOM05D005797 ORTHO05D006479 9.0e-08 60.5 53 49.1
FAN18G3318 Fragaria x ananassa HOM05D005797 ORTHO05D006479 9.0e-08 60.5 53 49.1
DCAR_007694 Daucus carota HOM05D005797 ORTHO05D006479 3.4e-07 58.5 49 40.8
Glyma.04G192400 Glycine max HOM05D005797 ORTHO05D006479 4.5e-07 58.2 49 53.1
Zm00001eb144270 Zea mays HOM05D005797 ORTHO05D006479 9.9e-07 57.0 45 51.1
Os01g0905400 Oryza sativa ssp. japonica HOM05D005797 ORTHO05D006479 1.3e-06 56.6 52 46.2
Oeu011579.3 Olea europaea HOM05D005797 ORTHO05D006479 1.7e-06 56.2 50 48.0
VMungo1309G1346 Vigna mungo HOM05D005797 ORTHO05D006479 2.2e-06 55.8 44 54.5
FAN04G0892 Fragaria x ananassa HOM05D005797 ORTHO05D006479 2.9e-06 55.5 53 47.2


User provided reference genes

Program Settings