Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 3.9e-80 301.6 172 100.0
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 4.9e-51 204.9 174 63.2
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 7.9e-49 197.6 170 64.1
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 7.9e-49 197.6 172 61.6
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 1.8e-48 196.4 170 61.2
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 5.1e-48 194.9 172 64.0
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 5.1e-48 194.9 172 64.0
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 1.9e-47 193.0 170 58.8
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 7.4e-47 191.0 170 58.2
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 9.6e-47 190.7 171 59.1
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 2.8e-46 189.1 169 62.7
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.1e-45 187.2 170 61.2
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 4.0e-45 185.3 170 60.0
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 4.5e-44 181.8 171 56.7
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 4.5e-44 181.8 171 56.7
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.3e-43 180.3 172 58.7
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 3.8e-43 178.7 170 58.8
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 4.9e-43 178.3 172 55.2
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 2.4e-42 176.0 168 56.0
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 4.2e-42 175.3 170 58.8
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.1e-42 174.5 170 57.1
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.1e-42 174.5 170 57.1
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 9.3e-42 174.1 169 59.2
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.2e-41 173.7 171 55.6
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 6.0e-41 171.4 170 54.1
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 6.7e-40 167.9 170 55.3
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 1.1e-39 167.2 170 56.5
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 5.6e-39 164.9 169 55.6
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.6e-38 163.3 173 53.2
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.1e-38 162.9 171 53.8
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.7e-38 162.2 171 53.2
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 4.8e-38 161.8 172 52.3
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 8.2e-38 161.0 171 52.6
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 8.2e-38 161.0 171 53.2
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.4e-37 160.2 170 50.6
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.8e-37 159.8 172 52.9
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 1.8e-37 159.8 174 52.9
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 2.4e-37 159.5 173 52.0
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.4e-37 159.5 171 53.2
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.0e-37 158.7 171 52.6
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 5.3e-37 158.3 170 50.0
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 6.9e-37 157.9 170 52.4
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 1.5e-36 156.8 173 52.6
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 2.0e-36 156.4 170 50.0
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 4.5e-36 155.2 176 53.4
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.5e-36 155.2 169 50.9
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.0e-35 154.1 171 52.6
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.7e-35 153.3 171 50.9
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.7e-35 153.3 171 50.9
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 1.7e-35 153.3 174 52.3
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.2e-35 152.9 171 50.9
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 4.9e-35 151.8 179 55.3
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.9e-35 151.8 169 49.7
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 8.4e-35 151.0 171 52.0
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.1e-34 150.6 171 52.0
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 1.4e-34 150.2 176 52.3
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 2.5e-34 149.4 168 50.6
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 4.2e-34 148.7 171 51.5
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 7.1e-34 147.9 169 49.7
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 9.3e-34 147.5 142 59.2
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 9.3e-34 147.5 174 52.3
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.6e-33 146.7 173 53.8
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.6e-33 146.7 169 49.1
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 2.1e-33 146.4 170 50.6
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 2.7e-33 146.0 180 50.0
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 4.6e-33 145.2 169 49.1
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 3.0e-32 142.5 173 45.7
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 3.0e-32 142.5 169 49.1
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.1e-31 140.6 174 56.9
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 9.7e-31 137.5 170 45.9
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 2.2e-30 136.3 169 45.6
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 4.8e-30 135.2 167 50.3
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 1.1e-29 134.0 173 42.8
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 6.9e-29 131.3 178 42.7
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.2e-28 130.6 167 49.1
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.0e-28 129.8 169 46.2
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 2.6e-28 129.4 171 44.4
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 3.4e-28 129.0 167 47.3
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 4.5e-28 128.6 168 49.4
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.0e-27 127.5 173 42.8
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 1.3e-27 127.1 170 53.5
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 1.3e-27 127.1 167 45.5
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 2.2e-27 126.3 204 44.1
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.9e-27 125.9 168 50.6
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 8.5e-27 124.4 170 44.7
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.1e-26 124.0 174 46.6
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 1.1e-26 124.0 175 42.3
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 1.1e-26 124.0 170 44.7
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.4e-26 123.6 170 44.1
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.9e-26 123.2 178 44.4
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 2.5e-26 122.9 170 45.3
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 2.5e-26 122.9 176 42.0
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 2.5e-26 122.9 180 54.4
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 7.2e-26 121.3 167 44.9
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 7.2e-26 121.3 168 43.5
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 9.3e-26 120.9 197 43.1
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 2.7e-25 119.4 220 37.7
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 2.7e-25 119.4 197 39.1
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 2.7e-25 119.4 197 39.1
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 4.6e-25 118.6 220 37.3
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 4.6e-25 118.6 195 47.7
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 6.1e-25 118.2 170 44.7
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 7.9e-25 117.9 174 42.0
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.0e-24 117.5 196 45.9
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.0e-24 117.5 161 42.9
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.3e-24 117.1 197 38.6
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.3e-24 117.1 197 38.6
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 5.1e-24 115.2 164 45.1
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 6.7e-24 114.8 154 44.2
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.1e-23 114.0 193 47.2
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 3.3e-23 112.5 197 45.2
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 5.7e-23 111.7 173 42.8
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 5.7e-23 111.7 167 46.1
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 9.7e-23 110.9 172 41.9
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.3e-22 110.5 225 35.1
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 2.2e-22 109.8 175 41.7
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 8.2e-22 107.8 200 40.5
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 1.1e-21 107.5 147 44.2
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 9.1e-21 104.4 170 42.9
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.5e-20 103.6 167 40.1
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.0e-20 103.2 168 40.5
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 2.6e-20 102.8 171 48.5
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 1.1e-18 97.4 149 43.0
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.6e-17 92.4 176 36.9
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 4.7e-17 92.0 160 39.4
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 4.7e-17 92.0 174 38.5
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 1.0e-16 90.9 131 45.0
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.4e-16 90.5 169 39.6
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 3.0e-16 89.4 174 36.2
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 3.3e-15 85.9 158 38.6
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 6.5e-11 71.6 144 36.8
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 5.5e-10 68.6 165 35.8
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.2e-09 67.4 167 32.9
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.2e-09 67.4 167 32.3
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 5.7e-07 58.5 63 47.6
SEGI_38354 Sequoiadendron giganteum HOM05D005769 ORTHO05D006851 2.8e-06 56.2 228 30.3
Os07g0520600 Oryza sativa ssp. japonica HOM05D005769 ORTHO05D006851 6.3e-06 55.1 180 37.2


User provided reference genes

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