Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 0.0e+00 1092.0 549 100.0
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 5.7e-234 814.3 549 76.1
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 1.3e-230 803.1 553 75.4
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 4.6e-228 794.7 549 74.7
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 9.7e-226 786.9 544 75.2
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 4.8e-225 784.6 543 73.7
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 8.2e-225 783.9 544 75.4
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 8.2e-225 783.9 547 74.2
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 1.2e-223 780.0 522 75.7
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 1.2e-223 780.0 543 73.8
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 2.0e-223 779.2 541 73.4
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 3.4e-223 778.5 538 73.8
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 2.2e-222 775.8 532 75.2
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 5.5e-221 771.2 547 72.9
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 9.4e-221 770.4 551 72.6
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 2.1e-220 769.2 543 72.4
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 5.1e-219 764.6 550 71.5
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 1.1e-218 763.5 537 72.8
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 7.4e-218 760.8 540 73.3
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 1.7e-217 759.6 543 72.0
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 3.7e-217 758.4 535 73.8
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 4.1e-216 755.0 543 70.5
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 1.2e-215 753.4 542 70.8
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 3.4e-215 751.9 541 71.5
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 1.0e-214 750.4 547 71.7
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 3.2e-213 745.3 544 71.0
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 7.2e-213 744.2 539 71.4
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 7.2e-213 744.2 544 70.8
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 1.6e-212 743.0 540 71.7
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 6.3e-209 731.1 545 68.8
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 1.4e-208 729.9 539 69.8
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 2.4e-208 729.2 546 69.6
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 1.6e-207 726.5 539 69.6
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 7.7e-207 724.2 522 70.9
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 6.5e-206 721.1 570 67.2
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 3.2e-205 718.8 536 70.0
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 3.6e-204 715.3 539 69.4
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 4.7e-204 714.9 550 68.0
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 1.4e-203 713.4 466 75.3
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 1.4e-203 713.4 509 72.3
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 8.8e-203 710.7 537 69.3
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 4.4e-202 708.4 566 66.6
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 7.5e-202 707.6 543 68.9
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 9.7e-202 707.2 543 68.3
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.2e-201 706.1 544 67.5
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 1.8e-200 703.0 519 70.3
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 3.1e-200 702.2 549 65.8
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 5.3e-200 701.4 543 66.7
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 9.1e-200 700.7 548 65.3
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 1.6e-199 699.9 544 66.9
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 3.5e-199 698.7 501 71.9
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 3.5e-199 698.7 497 71.6
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 7.2e-197 691.0 504 69.4
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 1.6e-196 689.9 538 66.0
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 2.7e-196 689.1 544 68.8
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 4.7e-196 688.3 531 67.6
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 1.4e-195 686.8 531 67.2
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 3.0e-195 685.6 545 64.8
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 2.0e-194 682.9 542 66.8
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 9.8e-194 680.6 533 66.8
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 1.1e-192 677.2 530 66.4
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 4.1e-192 675.2 531 66.3
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 9.1e-192 674.1 542 64.0
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 4.5e-191 671.8 457 74.4
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 5.9e-191 671.4 532 66.0
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 1.3e-190 670.2 532 65.8
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 4.7e-188 661.8 607 59.8
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 1.0e-187 660.6 535 66.5
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 6.8e-187 657.9 481 69.6
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 4.9e-185 651.7 471 69.6
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 1.1e-184 650.6 563 62.0
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 1.4e-184 650.2 416 76.0
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 9.2e-184 647.5 507 64.5
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 8.6e-182 641.0 531 64.4
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 3.3e-181 639.0 544 62.3
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 2.8e-180 636.0 545 62.4
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 1.8e-179 633.3 532 63.3
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 1.8e-179 633.3 532 63.3
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 3.1e-179 632.5 535 62.2
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 1.2e-178 630.6 532 63.2
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 4.6e-175 618.6 497 64.8
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 3.6e-172 609.0 541 60.8
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 8.1e-164 581.3 460 65.0
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 5.2e-163 578.6 559 60.5
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 4.4e-162 575.5 543 58.6
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 6.4e-161 571.6 472 62.7
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 6.4e-153 545.0 341 80.6
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 3.3e-141 506.1 482 55.8
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 3.1e-139 499.6 356 71.9
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 7.6e-138 495.0 475 53.7
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 1.4e-136 490.7 520 54.2
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 4.0e-131 472.6 504 51.0
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 9.0e-131 471.5 538 48.7
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.6e-122 443.4 375 63.5
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 1.7e-113 414.1 325 66.8
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 8.8e-110 401.7 475 47.6
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 7.4e-109 398.7 334 63.8
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 4.2e-96 356.3 276 66.7
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 2.6e-85 320.5 223 72.2
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 1.0e-73 282.0 218 62.4
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 5.2e-54 216.5 256 47.3
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 2.3e-46 191.0 128 73.4
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 7.1e-43 179.5 666 26.1
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 8.1e-39 166.0 120 67.5
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 2.4e-35 154.5 111 70.3
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 5.4e-35 153.3 135 62.2
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.9e-32 144.8 91 73.6
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 6.2e-31 139.8 81 82.7
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 2.1e-26 124.8 166 42.8
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 2.3e-25 121.3 109 53.2
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 1.3e-23 115.5 306 33.3
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 2.1e-23 114.8 304 32.2
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 7.6e-21 106.3 147 44.9
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 1.3e-20 105.5 141 44.0
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 5.5e-19 100.1 63 77.8
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 2.1e-18 98.2 123 45.5
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 3.5e-18 97.4 148 40.5
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 5.1e-09 67.0 178 30.3
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 5.1e-09 67.0 178 30.3
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 4.8e-07 60.5 67 49.3
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 2.4e-06 58.2 34 76.5


User provided reference genes

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