Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 1.5e-89 332.8 167 100.0
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 3.3e-76 288.5 163 87.1
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.1e-75 285.8 161 83.9
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 2.1e-75 285.8 153 88.9
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 2.8e-75 285.4 160 86.2
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.8e-75 285.4 160 86.9
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 2.8e-75 285.4 160 86.9
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 2.8e-75 285.4 160 86.9
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 1.4e-74 283.1 160 85.6
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 2.4e-74 282.3 160 83.1
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 1.5e-73 279.6 164 84.8
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 9.9e-73 276.9 160 83.1
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 9.9e-73 276.9 165 81.2
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 1.3e-72 276.6 161 83.2
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 6.4e-72 274.2 160 83.8
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 6.4e-72 274.2 163 82.8
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 6.4e-72 274.2 156 85.3
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 6.4e-72 274.2 163 82.2
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 8.4e-72 273.9 160 83.8
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 2.4e-71 272.3 157 84.1
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 3.2e-71 271.9 153 86.3
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 4.2e-71 271.6 150 87.3
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 4.2e-71 271.6 153 85.6
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 4.2e-71 271.6 153 85.6
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 4.2e-71 271.6 153 85.6
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 5.4e-71 271.2 161 81.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 5.4e-71 271.2 160 83.1
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 9.3e-71 270.4 153 83.7
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 9.3e-71 270.4 153 84.3
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 9.3e-71 270.4 160 81.2
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 9.3e-71 270.4 160 84.4
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 2.1e-70 269.2 153 83.0
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 3.5e-70 268.5 153 83.0
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 6.0e-70 267.7 153 83.0
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 6.0e-70 267.7 160 83.1
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 7.8e-70 267.3 153 83.0
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 1.3e-69 266.5 148 85.1
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 1.7e-69 266.2 170 78.8
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 1.7e-69 266.2 170 78.8
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 1.7e-69 266.2 151 86.1
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 3.0e-69 265.4 157 82.8
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 3.9e-69 265.0 153 83.0
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 3.9e-69 265.0 155 84.5
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 5.1e-69 264.6 153 81.0
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 5.1e-69 264.6 153 81.7
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 6.6e-69 264.2 160 83.1
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 1.1e-68 263.5 164 77.4
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 1.1e-68 263.5 152 84.9
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 1.1e-68 263.5 160 81.9
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.5e-68 263.1 159 82.4
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 1.5e-68 263.1 149 85.2
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 3.3e-68 261.9 160 81.9
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 4.3e-68 261.5 152 84.2
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 5.6e-68 261.2 153 81.0
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 5.6e-68 261.2 161 78.9
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 7.3e-68 260.8 154 80.5
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 7.3e-68 260.8 154 80.5
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 1.3e-67 260.0 166 79.5
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 2.8e-67 258.8 163 77.9
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 3.6e-67 258.5 148 83.8
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.1e-66 256.9 153 78.4
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 2.4e-66 255.8 162 79.0
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 2.4e-66 255.8 153 83.0
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 6.9e-66 254.2 163 78.5
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 9.0e-66 253.8 151 80.1
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 9.0e-66 253.8 160 81.2
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 1.2e-65 253.4 162 77.2
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 1.2e-65 253.4 151 82.8
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.5e-65 253.1 159 78.0
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 2.0e-65 252.7 150 80.7
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 3.8e-64 248.4 153 77.1
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 3.8e-64 248.4 156 78.8
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 1.2e-62 243.4 153 79.1
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 1.8e-61 239.6 158 75.9
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 6.7e-61 237.7 138 81.9
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 6.7e-61 237.7 164 75.0
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 2.5e-60 235.7 180 68.9
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 3.7e-59 231.9 214 59.8
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 1.1e-58 230.3 151 70.9
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.4e-58 229.9 124 87.9
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 2.4e-58 229.2 136 81.6
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 4.0e-58 228.4 160 72.5
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 6.9e-58 227.6 134 82.1
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 6.9e-58 227.6 134 82.1
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 9.0e-58 227.3 157 70.1
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 2.0e-57 226.1 144 74.3
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 2.6e-57 225.7 134 82.1
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 7.6e-57 224.2 124 85.5
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 2.2e-56 222.6 154 71.4
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 2.9e-56 222.2 129 82.2
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 4.9e-56 221.5 165 64.8
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 7.1e-55 217.6 155 70.3
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 6.0e-54 214.5 165 63.0
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 3.2e-47 192.2 174 63.8
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 6.0e-46 188.0 157 63.1
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 9.7e-44 180.6 108 75.9
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.1e-42 177.2 156 60.3
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 4.1e-42 175.3 115 72.2
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 3.8e-40 168.7 153 59.5
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 8.5e-40 167.5 115 65.2
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 2.1e-38 162.9 124 69.4
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 2.7e-38 162.5 152 53.3
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 3.6e-38 162.2 94 80.9
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 7.9e-38 161.0 100 82.0
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 1.1e-36 157.1 97 76.3
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 1.1e-34 150.6 162 51.2
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.6e-30 136.7 160 42.5
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.8e-29 133.3 79 72.2
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 3.9e-29 132.1 149 49.0
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-19 100.5 72 63.9
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 3.5e-17 92.4 57 77.2
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 4.5e-17 92.0 79 63.3
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.8e-10 70.1 42 78.6


User provided reference genes

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