Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0116 Trochodendron aralioides HOM05D003832 ORTHO05D004365 2.1e-91 339.0 163 100.0
Manes.02G069300 Manihot esculenta HOM05D003832 ORTHO05D004365 2.7e-59 232.3 140 79.3
Potri.006G075300 Populus trichocarpa HOM05D003832 ORTHO05D004365 1.0e-58 230.3 142 79.6
Ciclev10009594m.g Citrus clementina HOM05D003832 ORTHO05D004365 1.8e-58 229.6 140 78.6
RcHm_v2.0_Chr4g0399571 Rosa chinensis HOM05D003832 ORTHO05D004365 7.4e-57 224.2 144 75.7
RcHm_v2.0_Chr4g0399541 Rosa chinensis HOM05D003832 ORTHO05D004365 1.7e-56 223.0 144 75.7
Duzib170G0568 Durio zibethinus HOM05D003832 ORTHO05D004365 3.7e-56 221.9 149 71.8
MD13G1241600 Malus domestica HOM05D003832 ORTHO05D004365 3.7e-56 221.9 144 73.6
CiPaw.07G197200 Carya illinoinensis HOM05D003832 ORTHO05D004365 4.8e-56 221.5 144 73.6
MBI19_g45101_MAGBIO Magnolia biondii HOM05D003832 ORTHO05D004365 4.8e-56 221.5 131 81.7
QL07p021332 Quercus lobata HOM05D003832 ORTHO05D004365 4.8e-56 221.5 134 79.9
COL.COLO4_07061 Corchorus olitorius HOM05D003832 ORTHO05D004365 8.2e-56 220.7 149 73.8
Dinv41177 Davidia involucrata HOM05D003832 ORTHO05D004365 1.1e-55 220.3 141 77.3
FvH4_4g07280 Fragaria vesca HOM05D003832 ORTHO05D004365 1.1e-55 220.3 144 73.6
TWI63G0052 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 1.8e-55 219.5 146 74.7
FAN17G1929 Fragaria x ananassa HOM05D003832 ORTHO05D004365 2.4e-55 219.2 138 76.8
FvH4_5g15360 Fragaria vesca HOM05D003832 ORTHO05D004365 3.1e-55 218.8 144 74.3
FAN18G2818 Fragaria x ananassa HOM05D003832 ORTHO05D004365 3.1e-55 218.8 144 74.3
Hma1.2p1_1326F.1_g275840 Hydrangea macrophylla HOM05D003832 ORTHO05D004365 3.1e-55 218.8 141 73.8
Lj4g0009154 Lotus japonicus HOM05D003832 ORTHO05D004365 4.1e-55 218.4 140 75.0
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 5.3e-55 218.0 131 80.2
Prupe.1G075100 Prunus persica HOM05D003832 ORTHO05D004365 9.1e-55 217.2 144 72.9
CAN.G199.14 Capsicum annuum HOM05D003832 ORTHO05D004365 1.2e-54 216.9 141 75.2
Sed0004806 Sechium edule HOM05D003832 ORTHO05D004365 1.2e-54 216.9 147 72.8
Solyc07g008650.4 Solanum lycopersicum HOM05D003832 ORTHO05D004365 1.2e-54 216.9 141 75.9
Nn3g18876 Nelumbo nucifera HOM05D003832 ORTHO05D004365 2.0e-54 216.1 137 75.9
MELO3C017427.2 Cucumis melo HOM05D003832 ORTHO05D004365 4.5e-54 214.9 150 71.3
CsaV3_1G031890 Cucumis sativus L. HOM05D003832 ORTHO05D004365 4.5e-54 214.9 150 71.3
FAN08G2334 Fragaria x ananassa HOM05D003832 ORTHO05D004365 4.5e-54 214.9 140 75.0
Lalb_Chr13g0300001 Lupinus albus HOM05D003832 ORTHO05D004365 4.5e-54 214.9 140 74.3
Sopen07g004580 Solanum pennellii HOM05D003832 ORTHO05D004365 4.5e-54 214.9 141 75.2
FAN04G3185 Fragaria x ananassa HOM05D003832 ORTHO05D004365 7.7e-54 214.2 147 72.8
GSVIVG01010856001 Vitis vinifera HOM05D003832 ORTHO05D004365 1.0e-53 213.8 143 75.5
DCAR_018031 Daucus carota HOM05D003832 ORTHO05D004365 1.3e-53 213.4 141 70.2
THA.LOC104800261 Tarenaya hassleriana HOM05D003832 ORTHO05D004365 3.8e-53 211.8 146 71.9
Oeu005620.2 Olea europaea HOM05D003832 ORTHO05D004365 5.0e-53 211.5 135 77.0
Phvul.003G141300 Phaseolus vulgaris HOM05D003832 ORTHO05D004365 6.5e-53 211.1 145 72.4
Oeu064557.2 Olea europaea HOM05D003832 ORTHO05D004365 8.5e-53 210.7 135 77.0
Glyma.13G100600 Glycine max HOM05D003832 ORTHO05D004365 1.9e-52 209.5 140 74.3
Gorai.012G114300 Gossypium raimondii HOM05D003832 ORTHO05D004365 3.2e-52 208.8 149 69.1
Atru.chr12.1654 Acer truncatum HOM05D003832 ORTHO05D004365 7.2e-52 207.6 144 72.2
Aa31LG3G7130 Aethionema arabicum HOM05D003832 ORTHO05D004365 9.4e-52 207.2 142 70.4
CANSAT80G1489 Cannabis sativa HOM05D003832 ORTHO05D004365 2.1e-51 206.1 143 69.9
CANSAT80G0863 Cannabis sativa HOM05D003832 ORTHO05D004365 2.7e-51 205.7 143 70.6
Eucgr.E02911 Eucalyptus grandis HOM05D003832 ORTHO05D004365 3.6e-51 205.3 140 72.9
Glyma.17G059300 Glycine max HOM05D003832 ORTHO05D004365 3.6e-51 205.3 140 72.9
Medtr7g086830 Medicago truncatula HOM05D003832 ORTHO05D004365 6.1e-51 204.5 142 70.4
Eucgr.E02171 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.0e-50 203.8 140 72.1
PSO801G0378 Papaver somniferum HOM05D003832 ORTHO05D004365 1.0e-50 203.8 138 71.7
Eucgr.E02232 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.4e-50 203.4 140 72.1
Nitab4.5_0010556g0010 Nicotiana tabacum HOM05D003832 ORTHO05D004365 1.8e-50 203.0 149 69.8
Sabra06G0056000 Salix brachista HOM05D003832 ORTHO05D004365 1.8e-50 203.0 121 81.8
Zm00001eb054120 Zea mays HOM05D003832 ORTHO05D004365 3.0e-50 202.2 131 71.8
ATR0307G033 Amborella trichopoda HOM05D003832 ORTHO05D004365 6.7e-50 201.1 128 75.0
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 6.7e-50 201.1 141 68.8
Psat3g085920 Pisum sativum HOM05D003832 ORTHO05D004365 8.8e-50 200.7 142 69.7
Sp1g35130 Schrenkiella parvula HOM05D003832 ORTHO05D004365 8.8e-50 200.7 138 70.3
AT1G48175 Arabidopsis thaliana HOM05D003832 ORTHO05D004365 1.1e-49 200.3 140 70.0
TPR.G17987 Trifolium pratense HOM05D003832 ORTHO05D004365 1.1e-49 200.3 142 69.0
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 1.5e-49 199.9 130 74.6
Migut.L01881 Erythranthe guttata HOM05D003832 ORTHO05D004365 2.0e-49 199.5 141 70.2
Aqoxy2G00660 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 2.6e-49 199.1 144 68.8
Aqoxy3G00356 Aquilegia oxysepala HOM05D003832 ORTHO05D004365 2.6e-49 199.1 137 70.1
AL1G54750 Arabidopsis lyrata HOM05D003832 ORTHO05D004365 2.6e-49 199.1 141 68.8
CDE04G0848 Ceratophyllum demersum HOM05D003832 ORTHO05D004365 2.6e-49 199.1 135 72.6
Sc20g0003900 Simmondsia chinensis HOM05D003832 ORTHO05D004365 2.6e-49 199.1 129 74.4
C06p02680 Brassica napus HOM05D003832 ORTHO05D004365 3.3e-49 198.7 140 69.3
BcaC07g37168 Brassica carinata HOM05D003832 ORTHO05D004365 4.4e-49 198.4 140 68.6
BolC8t47358H Brassica oleracea HOM05D003832 ORTHO05D004365 4.4e-49 198.4 140 68.6
Thhalv10001035m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 9.7e-49 197.2 141 66.7
TPR.G31075 Trifolium pratense HOM05D003832 ORTHO05D004365 9.7e-49 197.2 143 69.2
Peaxi162Scf01038g00134 Petunia axillaris HOM05D003832 ORTHO05D004365 1.7e-48 196.4 129 74.4
BcaB04g17461 Brassica carinata HOM05D003832 ORTHO05D004365 2.8e-48 195.7 140 67.9
A08p05010 Brassica napus HOM05D003832 ORTHO05D004365 2.8e-48 195.7 141 69.5
BraA08t32523Z Brassica rapa HOM05D003832 ORTHO05D004365 2.8e-48 195.7 141 69.5
AUR62017542 Chenopodium quinoa HOM05D003832 ORTHO05D004365 2.8e-48 195.7 129 72.9
RcHm_v2.0_Chr7g0180711 Rosa chinensis HOM05D003832 ORTHO05D004365 2.8e-48 195.7 129 75.2
BcaC08g43013 Brassica carinata HOM05D003832 ORTHO05D004365 3.7e-48 195.3 140 67.9
A08p05170 Brassica napus HOM05D003832 ORTHO05D004365 3.7e-48 195.3 140 67.9
C08p05410 Brassica napus HOM05D003832 ORTHO05D004365 3.7e-48 195.3 140 67.9
ClCG06G013620 Citrullus lanatus HOM05D003832 ORTHO05D004365 3.7e-48 195.3 134 71.6
Sp7g33250 Schrenkiella parvula HOM05D003832 ORTHO05D004365 3.7e-48 195.3 140 67.9
TWI34G0584 Tripterygium wilfordii HOM05D003832 ORTHO05D004365 3.7e-48 195.3 126 77.0
Ah.01g002650 Amaranthus hybridus HOM05D003832 ORTHO05D004365 4.8e-48 194.9 129 70.5
VMungo1127G0216 Vigna mungo HOM05D003832 ORTHO05D004365 6.3e-48 194.5 134 72.4
BraA08t32534Z Brassica rapa HOM05D003832 ORTHO05D004365 8.2e-48 194.1 140 67.1
Gohir.A04G090600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 8.2e-48 194.1 123 74.8
VMungo1215G0400 Vigna mungo HOM05D003832 ORTHO05D004365 1.1e-47 193.7 134 72.4
HanXRQChr16g0514821 Helianthus annuus HOM05D003832 ORTHO05D004365 1.8e-47 193.0 140 68.6
HPP92_008659 Vanilla planifolia HOM05D003832 ORTHO05D004365 1.8e-47 193.0 128 70.3
Eucgr.E02530 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.4e-47 192.6 125 74.4
MSTRG.10440 Avicennia marina HOM05D003832 ORTHO05D004365 3.1e-47 192.2 135 68.9
Eucgr.E02915 Eucalyptus grandis HOM05D003832 ORTHO05D004365 7.0e-47 191.0 140 67.9
BcaB07g33785 Brassica carinata HOM05D003832 ORTHO05D004365 1.2e-46 190.3 140 65.0
Thhalv10012316m.g Eutrema salsugineum HOM05D003832 ORTHO05D004365 1.6e-46 189.9 140 65.7
EL10Ac9g22760 Beta vulgaris HOM05D003832 ORTHO05D004365 2.0e-46 189.5 130 70.8
Nitab4.5_0000725g0040 Nicotiana tabacum HOM05D003832 ORTHO05D004365 2.0e-46 189.5 129 72.9
Rhsim01G0116900 Rhododendron simsii HOM05D003832 ORTHO05D004365 2.0e-46 189.5 219 50.2
Ah.01g002120 Amaranthus hybridus HOM05D003832 ORTHO05D004365 1.0e-45 187.2 129 67.4
FAN22G0067 Fragaria x ananassa HOM05D003832 ORTHO05D004365 1.0e-45 187.2 114 78.1
Lsat_1_v5_gn_4_41160 Lactuca sativa HOM05D003832 ORTHO05D004365 1.7e-45 186.4 140 64.3
SalBow5G5556 Salvia bowleyana HOM05D003832 ORTHO05D004365 2.2e-45 186.0 129 67.4
unitig_8.g4676 Utricularia gibba HOM05D003832 ORTHO05D004365 2.2e-45 186.0 129 72.1
Nitab4.5_0000617g0240 Nicotiana tabacum HOM05D003832 ORTHO05D004365 5.0e-45 184.9 141 67.4
Eucgr.E02201 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.1e-44 183.7 121 73.6
Lsat_1_v5_gn_5_90120 Lactuca sativa HOM05D003832 ORTHO05D004365 1.9e-44 183.0 140 62.9
ECA232G4969 Erigeron canadensis HOM05D003832 ORTHO05D004365 3.2e-44 182.2 140 63.6
ECA234G0864 Erigeron canadensis HOM05D003832 ORTHO05D004365 7.2e-44 181.0 140 63.6
Cc02_g28290 Coffea canephora HOM05D003832 ORTHO05D004365 1.6e-43 179.9 121 71.9
BolC6t35394H Brassica oleracea HOM05D003832 ORTHO05D004365 4.0e-42 175.3 134 64.9
SEGI_25137 Sequoiadendron giganteum HOM05D003832 ORTHO05D004365 6.8e-42 174.5 137 60.6
Ah.01g001730 Amaranthus hybridus HOM05D003832 ORTHO05D004365 7.5e-41 171.0 123 65.9
Mapoly0047s0093 Marchantia polymorpha HOM05D003832 ORTHO05D004365 7.5e-41 171.0 145 55.9
BolC9t57639H Brassica oleracea HOM05D003832 ORTHO05D004365 1.8e-39 166.4 134 64.2
AUR62005177 Chenopodium quinoa HOM05D003832 ORTHO05D004365 1.8e-39 166.4 127 63.0
Cc02_g28310 Coffea canephora HOM05D003832 ORTHO05D004365 3.1e-39 165.6 127 64.6
BcaC06g35194 Brassica carinata HOM05D003832 ORTHO05D004365 4.1e-39 165.2 131 64.9
arahy.Tifrunner.gnm1.ann1.SNS3QW Arachis hypogaea HOM05D003832 ORTHO05D004365 5.3e-39 164.9 103 76.7
CBR_g19929 Chara braunii HOM05D003832 ORTHO05D004365 1.2e-38 163.7 132 59.8
Pp3c14_6040 Physcomitrium patens HOM05D003832 ORTHO05D004365 2.7e-38 162.5 137 57.7
BolC7t42388H Brassica oleracea HOM05D003832 ORTHO05D004365 1.5e-36 156.8 131 61.8
SMO164G0036 Selaginella moellendorffii HOM05D003832 ORTHO05D004365 4.7e-35 151.8 119 61.3
Eucgr.E02102 Eucalyptus grandis HOM05D003832 ORTHO05D004365 8.0e-35 151.0 117 66.7
SGA_v2.0_scaffold14G07081 Striga asiatica HOM05D003832 ORTHO05D004365 2.3e-34 149.4 133 58.6
arahy.Tifrunner.gnm1.ann1.S5DLTG Arachis hypogaea HOM05D003832 ORTHO05D004365 1.5e-33 146.7 94 74.5
arahy.Tifrunner.gnm1.ann1.K6AR5W Arachis hypogaea HOM05D003832 ORTHO05D004365 3.4e-33 145.6 94 73.4
Thecc.09G186100 Theobroma cacao HOM05D003832 ORTHO05D004365 8.3e-32 141.0 98 69.4
EL10Ac4g09380 Beta vulgaris HOM05D003832 ORTHO05D004365 1.1e-31 140.6 118 56.8
EL10Ac4g09383 Beta vulgaris HOM05D003832 ORTHO05D004365 1.1e-31 140.6 118 56.8
Eucgr.E02551 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.1e-31 140.6 81 80.2
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.1e-31 139.0 91 73.6
C07p18790 Brassica napus HOM05D003832 ORTHO05D004365 5.4e-31 138.3 153 51.0
PGSC0003DMG400022976 Solanum tuberosum HOM05D003832 ORTHO05D004365 9.1e-31 137.5 129 60.5
Eucgr.E02175 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.0e-30 136.3 104 66.3
Gohir.D04G130600 Gossypium hirsutum HOM05D003832 ORTHO05D004365 2.7e-30 136.0 100 67.0
SGA_v2.0_scaffold231G43408 Striga asiatica HOM05D003832 ORTHO05D004365 7.7e-30 134.4 129 55.8
Haze_22022 Corylus avellana HOM05D003832 ORTHO05D004365 1.0e-29 134.0 82 76.8
SalBow5G0739 Salvia bowleyana HOM05D003832 ORTHO05D004365 1.3e-29 133.7 90 67.8
Eucgr.E02142 Eucalyptus grandis HOM05D003832 ORTHO05D004365 6.6e-29 131.3 109 61.5
MCO05G158 Micromonas commoda HOM05D003832 ORTHO05D004365 1.5e-28 130.2 145 49.7
CDE07G0789 Ceratophyllum demersum HOM05D001368 ORTHO05D003846 4.7e-27 125.2 74 75.7
Eucgr.E02291 Eucalyptus grandis HOM05D003832 ORTHO05D004365 4.7e-27 125.2 133 51.9
PRCOL_00000145 Prasinoderma coloniale HOM05D003832 ORTHO05D004365 2.3e-26 122.9 138 47.8
Cre12.g509600 Chlamydomonas reinhardtii HOM05D003832 ORTHO05D004365 8.9e-26 120.9 102 56.9
CARHR289090 Cardamine hirsuta HOM05D003832 ORTHO05D004365 9.8e-25 117.5 83 68.7
A05p26850 Brassica napus HOM05D003832 ORTHO05D004365 1.7e-24 116.7 95 63.2
A07p42340 Brassica napus HOM05D003832 ORTHO05D004365 1.7e-24 116.7 95 63.2
AUR62015080 Chenopodium quinoa HOM05D003832 ORTHO05D004365 1.7e-24 116.7 71 76.1
C09p47960 Brassica napus HOM05D003832 ORTHO05D004365 2.2e-24 116.3 78 70.5
BraA05t21564Z Brassica rapa HOM05D003832 ORTHO05D004365 1.4e-23 113.6 74 71.6
PSO832G0096 Papaver somniferum HOM05D003832 ORTHO05D004365 4.1e-23 112.1 88 62.5
BraA05t20080Z Brassica rapa HOM05D003832 ORTHO05D004365 4.5e-22 108.6 74 70.3
Cfa026363 Carpinus fangiana HOM05D011254 ORTHO05D013441 2.9e-21 105.9 125 47.2
MD16G1248500 Malus domestica HOM05D003832 ORTHO05D004365 8.6e-21 104.4 63 79.4
EL10Ac4g09389 Beta vulgaris HOM05D003832 ORTHO05D004365 1.0e-18 97.4 118 44.1
Haze_26440 Corylus avellana HOM05D003832 ORTHO05D004365 1.2e-17 94.0 143 38.5
AUR62000790 Chenopodium quinoa HOM05D003832 ORTHO05D004365 1.5e-17 93.6 70 65.7
Lj5A749G38 Lonicera japonica HOM05D003832 ORTHO05D004365 2.6e-17 92.8 64 68.8
BcaC06g36546 Brassica carinata HOM05D003832 ORTHO05D004365 1.3e-16 90.5 97 52.6
Eucgr.E02147 Eucalyptus grandis HOM05D003832 ORTHO05D004365 1.7e-16 90.1 121 43.0
Eucgr.E02248 Eucalyptus grandis HOM05D003832 ORTHO05D004365 4.9e-16 88.6 55 70.9
Eucgr.E02296 Eucalyptus grandis HOM05D003832 ORTHO05D004365 7.0e-15 84.7 55 70.9
CSS0017606 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 2.7e-14 82.8 49 77.6
CSS0037914 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 2.7e-14 82.8 49 77.6
Os03g0321900 Oryza sativa ssp. japonica HOM05D003832 ORTHO05D004365 6.0e-14 81.6 45 77.8
AagrBONN_evm.TU.Sc2ySwM_228.1832 Anthoceros agrestis HOM05D003832 ORTHO05D004365 1.2e-11 73.9 130 34.6
Eucgr.E02600 Eucalyptus grandis HOM05D003832 ORTHO05D004365 3.6e-11 72.4 68 54.4
Eucgr.E02304 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.6e-09 66.2 47 63.8
CSS0018468 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 9.8e-09 64.3 47 68.1
CSS0020950 Camellia sinensis var. sinensis HOM05D003832 ORTHO05D004365 9.8e-09 64.3 47 68.1
COL.COLO4_10721 Corchorus olitorius HOM05D003832 ORTHO05D004365 4.1e-07 58.9 30 86.7
Lj5A766G14 Lonicera japonica HOM05D003832 ORTHO05D004365 1.2e-06 57.4 52 51.9
FvH4_4g02103 Fragaria vesca HOM05D003832 ORTHO05D004365 1.6e-06 57.0 38 68.4
Eucgr.E02240 Eucalyptus grandis HOM05D003832 ORTHO05D004365 2.7e-06 56.2 48 58.3


User provided reference genes

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