Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 3.0e-85 318.5 168 100.0
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 7.9e-70 267.3 165 83.6
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 2.5e-68 262.3 165 81.2
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 3.3e-68 261.9 165 81.2
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 3.7e-67 258.5 172 79.7
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 3.7e-67 258.5 160 80.6
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 2.6e-65 252.3 165 80.0
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 3.4e-65 251.9 173 75.7
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 4.5e-65 251.5 173 75.7
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 4.5e-65 251.5 173 75.7
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 5.9e-65 251.1 156 81.4
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 1.7e-64 249.6 163 79.8
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 2.9e-64 248.8 156 79.5
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 2.9e-64 248.8 171 76.0
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 3.2e-63 245.4 168 76.8
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 7.2e-63 244.2 162 78.4
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 7.2e-63 244.2 162 79.6
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 9.3e-63 243.8 162 78.4
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 1.0e-61 240.4 165 77.0
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 1.8e-61 239.6 158 78.5
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 1.8e-61 239.6 151 80.1
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 3.0e-61 238.8 159 73.6
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 3.0e-61 238.8 163 74.8
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 5.1e-61 238.0 159 74.8
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 6.7e-61 237.7 163 76.7
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 6.7e-61 237.7 162 75.3
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 1.1e-60 236.9 165 75.8
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 1.1e-60 236.9 165 75.8
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 2.5e-60 235.7 164 73.2
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 3.3e-60 235.3 153 79.7
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 3.3e-60 235.3 158 77.2
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 3.3e-60 235.3 158 77.8
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 4.3e-60 235.0 165 73.3
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 4.3e-60 235.0 162 74.1
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 4.3e-60 235.0 158 77.8
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 5.7e-60 234.6 151 79.5
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 5.7e-60 234.6 168 71.4
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 7.4e-60 234.2 158 78.5
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.3e-59 233.4 155 76.1
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 2.2e-59 232.6 160 74.4
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 2.2e-59 232.6 161 75.2
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 2.8e-59 232.3 165 72.1
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 2.8e-59 232.3 153 78.4
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 3.7e-59 231.9 160 78.1
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 3.7e-59 231.9 163 75.5
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 4.8e-59 231.5 202 63.9
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 6.3e-59 231.1 165 71.5
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 6.3e-59 231.1 163 73.0
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 6.3e-59 231.1 162 75.3
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 1.1e-58 230.3 163 76.1
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 2.4e-58 229.2 155 78.1
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 2.4e-58 229.2 159 73.6
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 2.4e-58 229.2 162 72.8
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 1.5e-57 226.5 141 80.9
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 1.5e-57 226.5 160 74.4
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 2.0e-57 226.1 164 70.1
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 3.4e-57 225.3 151 76.2
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 7.7e-57 224.2 155 72.3
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 1.3e-56 223.4 150 76.7
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 2.2e-56 222.6 158 70.9
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 1.1e-55 220.3 154 75.3
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 1.1e-55 220.3 148 75.0
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 2.5e-55 219.2 161 70.2
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 4.2e-55 218.4 155 70.3
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 1.6e-54 216.5 141 80.9
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 2.1e-54 216.1 145 77.2
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 2.1e-54 216.1 160 73.8
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 2.7e-54 215.7 145 76.6
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 4.6e-54 214.9 145 75.9
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 3.0e-53 212.2 145 75.2
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 1.1e-52 210.3 145 74.5
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 1.1e-52 210.3 156 73.1
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 1.5e-52 209.9 158 67.7
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 1.5e-52 209.9 138 80.4
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 2.5e-52 209.1 153 71.9
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 5.7e-52 208.0 145 73.8
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 7.4e-52 207.6 183 62.3
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 1.3e-51 206.8 148 74.3
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 2.2e-51 206.1 152 68.4
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 8.2e-51 204.1 153 70.6
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 8.2e-51 204.1 152 68.4
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 1.1e-50 203.8 151 71.5
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 2.4e-50 202.6 140 75.7
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 3.1e-50 202.2 145 75.2
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 9.1e-50 200.7 146 73.3
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 9.1e-50 200.7 146 73.3
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 9.1e-50 200.7 145 73.8
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 1.2e-49 200.3 150 68.0
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 1.5e-49 199.9 146 73.3
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 1.5e-49 199.9 146 73.3
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 3.4e-49 198.7 145 73.1
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 7.7e-49 197.6 146 71.9
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 7.7e-49 197.6 124 79.8
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 1.0e-48 197.2 143 74.1
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 1.0e-48 197.2 143 74.1
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 3.8e-48 195.3 143 73.4
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 3.8e-48 195.3 138 74.6
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 1.1e-47 193.7 159 64.2
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 1.4e-47 193.4 151 72.2
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 2.5e-47 192.6 138 73.2
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 3.2e-47 192.2 137 73.7
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 7.2e-47 191.0 127 74.8
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 1.8e-45 186.4 107 86.9
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 2.3e-45 186.0 148 65.5
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 8.8e-45 184.1 159 62.9
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 1.1e-44 183.7 180 57.8
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 1.7e-43 179.9 131 74.8
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 6.3e-43 177.9 107 81.3
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 3.1e-42 175.6 128 74.2
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 1.2e-41 173.7 128 73.4
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 1.6e-41 173.3 148 61.5
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 1.7e-40 169.9 103 84.5
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 1.1e-39 167.2 101 84.2
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 2.7e-38 162.5 109 77.1
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 2.7e-38 162.5 127 68.5
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 1.5e-36 156.8 106 75.5
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 2.6e-36 156.0 110 72.7
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 5.7e-36 154.8 102 81.4
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 6.3e-35 151.4 101 77.2
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 6.3e-35 151.4 118 65.3
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 1.1e-34 150.6 159 49.1
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.6e-33 146.7 122 61.5
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 1.5e-28 130.2 82 78.0
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 7.5e-28 127.9 84 78.6
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 5.0e-24 115.2 96 68.8
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 8.8e-21 104.4 118 55.1
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 1.1e-18 97.4 60 85.0
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 5.4e-18 95.1 128 43.8
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 2.7e-17 92.8 125 41.6
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 5.9e-17 91.7 98 53.1
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 5.9e-17 91.7 128 39.8
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 2.3e-16 89.7 58 72.4
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 1.4e-13 80.5 53 71.7
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 3.2e-10 69.3 52 65.4
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 8.6e-08 61.2 48 64.6
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 8.6e-08 61.2 48 64.6
Prupe.5G038700 Prunus persica HOM05D005569 ORTHO05D007052 4.3e-07 58.9 48 64.6
C08p44260 Brassica napus HOM05D005569 ORTHO05D007052 4.7e-06 55.5 46 60.9


User provided reference genes

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