Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 9.3e-217 756.5 363 100.0
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 1.1e-140 503.8 363 67.2
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 2.0e-139 499.6 362 67.1
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 3.2e-132 475.7 363 64.2
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 6.8e-127 458.0 358 64.2
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 2.6e-126 456.1 366 63.1
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 8.3e-125 451.1 354 62.4
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 9.2e-124 447.6 361 62.9
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 7.8e-123 444.5 359 59.9
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 3.6e-120 435.6 359 59.3
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 6.2e-120 434.9 359 61.0
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.4e-119 433.7 359 59.6
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 4.9e-117 425.2 352 61.1
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.9e-116 423.3 362 60.2
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 3.0e-114 416.0 358 58.9
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 8.6e-114 414.5 360 56.4
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 5.6e-113 411.8 360 57.2
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.0e-110 403.3 322 60.9
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.8e-109 399.1 348 56.6
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 6.4e-109 398.3 358 58.1
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.2e-107 394.0 317 60.3
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 2.7e-107 392.9 358 56.1
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 7.8e-107 391.3 358 57.0
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.0e-106 391.0 358 56.7
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 1.7e-106 390.2 358 56.7
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 3.0e-106 389.4 489 47.0
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 1.9e-105 386.7 360 54.2
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 1.8e-103 380.2 354 55.9
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 3.1e-103 379.4 346 58.1
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 3.4e-102 375.9 355 54.4
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 2.9e-101 372.9 356 54.2
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 4.9e-101 372.1 337 55.8
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 1.9e-100 370.2 344 57.0
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 3.5e-99 365.9 337 56.1
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 1.3e-98 364.0 366 53.3
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 6.6e-98 361.7 343 53.9
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.5e-97 360.5 337 54.6
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 3.3e-97 359.4 362 51.4
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 3.3e-97 359.4 357 54.1
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 3.3e-97 359.4 346 53.8
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 7.3e-97 358.2 301 61.8
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 1.6e-96 357.1 337 55.8
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 1.6e-96 357.1 359 53.2
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 4.0e-95 352.4 362 51.9
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 1.3e-93 347.4 359 51.0
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 3.8e-93 345.9 346 54.3
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 3.8e-93 345.9 343 52.5
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.9e-93 345.5 317 55.5
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 4.2e-92 342.4 326 54.9
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 7.9e-91 338.2 367 49.0
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.3e-90 337.4 375 49.6
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 6.7e-90 335.1 362 51.7
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 8.7e-90 334.7 361 50.7
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 4.3e-89 332.4 358 49.7
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 8.1e-88 328.2 317 53.9
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 1.8e-87 327.0 676 33.4
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 5.3e-87 325.5 377 48.5
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 2.6e-86 323.2 348 50.0
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 2.2e-85 320.1 320 52.2
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 8.4e-85 318.2 354 50.3
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 1.1e-84 317.8 353 50.1
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.1e-84 317.8 275 60.0
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 5.5e-84 315.5 351 50.7
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 3.5e-83 312.8 353 50.1
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 4.6e-83 312.4 358 47.2
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 7.9e-83 311.6 355 50.1
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 1.3e-82 310.8 355 49.9
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 3.0e-82 309.7 371 46.6
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 5.1e-82 308.9 301 53.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 5.1e-82 308.9 358 47.8
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 8.7e-82 308.1 349 49.0
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.6e-80 303.9 355 48.7
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 3.4e-78 296.2 297 53.2
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 2.2e-77 293.5 377 44.8
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 1.4e-76 290.8 369 45.5
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 1.9e-76 290.4 203 68.0
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 3.2e-76 289.7 328 50.3
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 7.1e-76 288.5 354 46.9
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 9.3e-76 288.1 362 44.5
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 3.5e-75 286.2 353 47.3
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 3.0e-74 283.1 272 55.9
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 7.4e-73 278.5 336 45.5
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 2.2e-72 276.9 347 45.5
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 1.8e-66 257.3 272 52.9
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.8e-66 257.3 250 52.8
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 3.0e-66 256.5 337 43.6
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 4.5e-62 242.7 255 51.4
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 1.7e-61 240.7 250 51.6
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 4.2e-52 209.5 367 36.0
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.2e-51 208.0 151 70.2
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 8.0e-51 205.3 278 42.8
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 6.7e-50 202.2 290 42.1
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 5.7e-49 199.1 294 38.4
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 1.4e-47 194.5 228 49.1
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 1.8e-42 177.6 172 52.3
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 5.9e-38 162.5 133 58.6
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 3.8e-37 159.8 156 53.2
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.6e-35 154.5 114 64.0
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 1.6e-35 154.5 308 35.1
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 4.5e-30 136.3 250 36.0
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 2.3e-29 134.0 123 51.2
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 3.8e-29 133.3 132 52.3
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 1.6e-27 127.9 341 30.2
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 6.1e-27 125.9 131 54.2
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 4.0e-26 123.2 103 54.4
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 2.0e-25 120.9 251 31.9
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 5.6e-20 102.8 121 47.1
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 2.4e-15 87.4 116 40.5
Atru.chr3.3228 Acer truncatum HOM05D000154 ORTHO05D000092 1.9e-12 77.8 60 61.7
CiPaw.09G139700 Carya illinoinensis HOM05D005725 ORTHO05D007531 3.3e-12 77.0 139 40.3
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 2.1e-11 74.3 146 37.0
SEGI_16346 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 4.0e-10 70.1 121 37.2
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 1.1e-07 62.0 71 45.1


User provided reference genes

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