Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0013 Trochodendron aralioides HOM05D000971 ORTHO05D415841 4.2e-192 674.5 333 100.0
Nn7g37640 Nelumbo nucifera HOM05D000971 ORTHO05D000901 7.1e-46 188.7 276 43.1
QL05p062765 Quercus lobata HOM05D000971 ORTHO05D000901 1.0e-28 131.7 241 39.8
Cfa016792 Carpinus fangiana HOM05D000971 ORTHO05D000901 8.1e-26 122.1 243 39.1
CiPaw.01G118200 Carya illinoinensis HOM05D000971 ORTHO05D000901 1.4e-22 111.3 323 31.6
Prupe.4G091600 Prunus persica HOM05D000971 ORTHO05D000901 2.4e-22 110.5 219 37.4
RcHm_v2.0_Chr5g0016521 Rosa chinensis HOM05D000971 ORTHO05D000901 2.7e-21 107.1 268 33.2
Haze_19818 Corylus avellana HOM05D000971 ORTHO05D000901 7.9e-21 105.5 243 37.4
Haze_19821 Corylus avellana HOM05D000971 ORTHO05D000901 1.8e-20 104.4 242 37.6
TWI38G1004 Tripterygium wilfordii HOM05D000971 ORTHO05D000901 1.8e-20 104.4 343 28.3
Aqoxy4G00028 Aquilegia oxysepala HOM05D000971 ORTHO05D000901 2.3e-20 104.0 313 32.6
Hma1.2p1_0947F.1_g240380 Hydrangea macrophylla HOM05D000971 ORTHO05D000901 8.7e-20 102.1 304 32.9
Dinv26568 Davidia involucrata HOM05D000971 ORTHO05D000901 5.6e-19 99.4 341 32.3
Hma1.2p1_0437F.1_g153040 Hydrangea macrophylla HOM05D000971 ORTHO05D000901 7.4e-19 99.0 304 32.6
TWI15G1104 Tripterygium wilfordii HOM05D000971 ORTHO05D000901 7.4e-19 99.0 366 27.9
GSVIVG01021697001 Vitis vinifera HOM05D000971 ORTHO05D000901 2.1e-18 97.4 310 28.4
MD10G1251800 Malus domestica HOM05D000971 ORTHO05D000901 1.0e-15 88.6 273 32.6
Rhsim02G0163700 Rhododendron simsii HOM05D000971 ORTHO05D000901 1.7e-15 87.8 284 29.9
Rhsim02G0163000 Rhododendron simsii HOM05D000971 ORTHO05D000901 6.5e-15 85.9 285 30.9
Actinidia31366 Actinidia chinensis HOM05D000971 ORTHO05D000901 7.1e-14 82.4 187 37.4
MSTRG.7544 Avicennia marina HOM05D000971 ORTHO05D000901 2.7e-13 80.5 338 30.2
Cpa.g.sc166.39 Carica papaya HOM05D000971 ORTHO05D000901 3.5e-13 80.1 227 34.8
MBI02_g25364_MAGBIO Magnolia biondii HOM05D000971 ORTHO05D000901 3.5e-13 80.1 321 30.5
Potri.001G465401 Populus trichocarpa HOM05D000971 ORTHO05D000901 4.6e-13 79.7 269 30.1
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.3e-12 78.2 238 32.8
SalBow8G4876 Salvia bowleyana HOM05D000971 ORTHO05D000901 2.3e-12 77.4 185 33.5
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 5.1e-12 76.3 240 32.5
Ciclev10004329m.g Citrus clementina HOM05D000971 ORTHO05D000901 6.7e-12 75.9 374 27.8
Lj1C1161T7 Lonicera japonica HOM05D000971 ORTHO05D000901 8.7e-12 75.5 277 31.4
Phvul.006G127000 Phaseolus vulgaris HOM05D000971 ORTHO05D000901 1.6e-10 71.2 278 28.4
Migut.M01904 Erythranthe guttata HOM05D000971 ORTHO05D000901 3.7e-10 70.1 247 28.3
Glyma.09G025500 Glycine max HOM05D000971 ORTHO05D000901 4.8e-10 69.7 278 27.0
VMungo0540G0107 Vigna mungo HOM05D000971 ORTHO05D000901 4.8e-10 69.7 273 28.6
Potri.011G163500 Populus trichocarpa HOM05D000971 ORTHO05D000901 8.2e-10 68.9 277 29.6
Atru.chr1.1187 Acer truncatum HOM05D000971 ORTHO05D000901 1.4e-09 68.2 269 32.0
Glyma.15G131600 Glycine max HOM05D000971 ORTHO05D000901 1.4e-09 68.2 275 27.3
Oeu040088.1 Olea europaea HOM05D000971 ORTHO05D000901 4.1e-09 66.6 347 25.4
CANSAT35G1512 Cannabis sativa HOM05D000971 ORTHO05D000901 6.9e-09 65.9 229 29.3
Lj6g0008031 Lotus japonicus HOM05D000971 ORTHO05D000901 2.0e-08 64.3 185 31.9
Cc09_g07650 Coffea canephora HOM05D000971 ORTHO05D000901 4.5e-08 63.2 244 29.9
FAN11G1806 Fragaria x ananassa HOM05D000971 ORTHO05D000901 5.8e-08 62.8 172 30.2
Sc24g0001340 Simmondsia chinensis HOM05D000971 ORTHO05D000901 5.8e-08 62.8 186 29.0
FvH4_3g10260 Fragaria vesca HOM05D000971 ORTHO05D000901 7.6e-08 62.4 172 30.2
FAN21G2247 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.0e-07 62.0 172 30.8
Sed0017727 Sechium edule HOM05D000971 ORTHO05D000901 1.0e-07 62.0 293 30.0
FAN16G2017 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.9e-07 60.5 191 29.8
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.8e-07 60.1 181 30.4
MD05G1271200 Malus domestica HOM05D000971 ORTHO05D000901 5.0e-07 59.7 182 33.0
SGA_v2.0_scaffold1G00274 Striga asiatica HOM05D000971 ORTHO05D000901 1.9e-06 57.8 213 30.0
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 5.5e-06 56.2 145 35.2
Manes.14G124200 Manihot esculenta HOM05D000971 ORTHO05D000901 7.2e-06 55.8 124 37.9


User provided reference genes

Program Settings