Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 1.8e-55 219.2 121 100.0
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 8.3e-29 130.6 121 68.6
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 3.2e-28 128.6 115 68.7
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 4.1e-28 128.3 123 65.9
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 1.6e-27 126.3 121 66.9
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 4.6e-27 124.8 122 64.8
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 4.6e-27 124.8 121 63.6
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 5.9e-27 124.4 125 68.0
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 1.0e-26 123.6 124 66.9
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 1.3e-26 123.2 121 67.8
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 2.3e-26 122.5 126 61.9
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 6.6e-26 120.9 121 64.5
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 6.6e-26 120.9 121 64.5
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 6.6e-26 120.9 119 65.5
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 1.1e-25 120.2 124 59.7
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 1.5e-25 119.8 121 66.1
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 1.5e-25 119.8 126 59.5
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 1.9e-25 119.4 124 61.3
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 2.5e-25 119.0 121 62.8
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 2.5e-25 119.0 122 64.8
PSO675G1942 Papaver somniferum HOM05D006797 ORTHO05D007696 4.3e-25 118.2 121 62.8
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 7.3e-25 117.5 126 58.7
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 1.2e-24 116.7 128 62.5
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 1.2e-24 116.7 123 65.0
PSO541G4265 Papaver somniferum HOM05D006797 ORTHO05D007696 1.2e-24 116.7 121 62.0
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 1.2e-24 116.7 119 63.0
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 1.6e-24 116.3 129 58.9
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 2.1e-24 115.9 127 59.8
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 3.6e-24 115.2 128 58.6
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 6.2e-24 114.4 126 57.9
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 1.8e-23 112.8 124 59.7
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 2.3e-23 112.5 126 61.1
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 5.2e-23 111.3 122 58.2
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 1.2e-22 110.2 107 65.4
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 2.6e-22 109.0 127 63.0
Nn1g05854 Nelumbo nucifera HOM05D006797 ORTHO05D007696 2.6e-22 109.0 113 59.3
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 2.6e-22 109.0 119 59.7
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 3.4e-22 108.6 125 60.8
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 4.4e-22 108.2 125 56.8
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 7.5e-22 107.5 126 61.1
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 7.5e-22 107.5 121 62.8
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 9.8e-22 107.1 121 60.3
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.3e-21 106.7 123 55.3
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 1.3e-21 106.7 121 60.3
Solyc02g082020.3 Solanum lycopersicum HOM05D006797 ORTHO05D007696 2.2e-21 105.9 123 61.0
CAN.G809.30 Capsicum annuum HOM05D006797 ORTHO05D007696 2.9e-21 105.5 123 60.2
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 2.9e-21 105.5 123 61.8
Cc09_g04790 Coffea canephora HOM05D006797 ORTHO05D007696 3.7e-21 105.1 121 61.2
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 4.9e-21 104.8 123 54.5
PGSC0003DMG400007337 Solanum tuberosum HOM05D006797 ORTHO05D007696 4.9e-21 104.8 123 60.2
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 6.4e-21 104.4 109 63.3
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 8.3e-21 104.0 123 54.5
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 8.3e-21 104.0 132 59.1
Sopen02g026660 Solanum pennellii HOM05D006797 ORTHO05D007696 1.4e-20 103.2 123 59.3
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 1.9e-20 102.8 124 53.2
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 2.4e-20 102.4 123 53.7
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 2.4e-20 102.4 123 53.7
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 2.4e-20 102.4 127 61.4
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 5.4e-20 101.3 128 54.7
Nitab4.5_0003902g0030 Nicotiana tabacum HOM05D006797 ORTHO05D007696 1.6e-19 99.8 123 57.7
Nitab4.5_0000632g0020 Nicotiana tabacum HOM05D006797 ORTHO05D007696 2.0e-19 99.4 123 56.9
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 4.6e-19 98.2 105 61.0
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 6.0e-19 97.8 128 51.6
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 6.0e-19 97.8 129 51.9
Potri.003G155400 Populus trichocarpa HOM05D006797 ORTHO05D007696 1.0e-18 97.1 130 54.6
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 5.0e-18 94.7 100 59.0
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 8.6e-18 94.0 124 55.6
Peaxi162Scf00036g02019 Petunia axillaris HOM05D006797 ORTHO05D007696 1.1e-17 93.6 123 57.7
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 1.5e-17 93.2 124 55.6
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 1.9e-17 92.8 124 54.8
HanXRQChr12g0377351 Helianthus annuus HOM05D006797 ORTHO05D007696 1.9e-17 92.8 122 55.7
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 2.5e-17 92.4 134 48.5
THA.LOC104812696 Tarenaya hassleriana HOM05D006797 ORTHO05D007696 2.5e-17 92.4 134 53.7
ECA248G3234 Erigeron canadensis HOM05D006797 ORTHO05D007696 4.3e-17 91.7 123 56.1
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 1.2e-16 90.1 109 56.0
Lsat_1_v5_gn_3_103300 Lactuca sativa HOM05D006797 ORTHO05D007696 6.2e-16 87.8 112 52.7
COL.COLO4_25039 Corchorus olitorius HOM05D006797 ORTHO05D007696 1.4e-15 86.7 101 56.4
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 6.8e-15 84.3 114 53.5
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 8.9e-15 84.0 96 57.3
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 1.2e-14 83.6 115 51.3
Os04g0611300 Oryza sativa ssp. japonica HOM05D006797 ORTHO05D007696 3.4e-14 82.0 115 50.4
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 7.5e-14 80.9 114 53.5
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 1.3e-13 80.1 75 62.7
DCAR_001265 Daucus carota HOM05D006797 ORTHO05D007696 2.9e-13 79.0 104 53.8
Cfa002056 Carpinus fangiana HOM05D006797 ORTHO05D007696 6.4e-13 77.8 155 40.6
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 8.3e-13 77.4 52 76.9
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 1.1e-12 77.0 58 74.1
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 4.1e-12 75.1 71 60.6
Aa31LG6G12300 Aethionema arabicum HOM05D006797 ORTHO05D007696 9.2e-12 73.9 122 51.6
Sabra03G0112800 Salix brachista HOM05D006797 ORTHO05D007696 9.2e-12 73.9 49 79.6
BcaC07g37796 Brassica carinata HOM05D006797 ORTHO05D007696 2.7e-11 72.4 118 50.8
A08p10910 Brassica napus HOM05D006797 ORTHO05D007696 2.7e-11 72.4 118 50.8
BraA08t33088Z Brassica rapa HOM05D006797 ORTHO05D007696 2.7e-11 72.4 120 50.0
AL1G45170 Arabidopsis lyrata HOM05D006797 ORTHO05D007696 6.0e-11 71.2 122 50.0
A07p09570 Brassica napus HOM05D006797 ORTHO05D007696 7.8e-11 70.9 114 50.0
BraA07t28751Z Brassica rapa HOM05D006797 ORTHO05D007696 7.8e-11 70.9 114 50.0
AT1G30880 Arabidopsis thaliana HOM05D006797 ORTHO05D007696 1.0e-10 70.5 122 50.8
Carub.0001s2922 Capsella rubella HOM05D006797 ORTHO05D007696 1.3e-10 70.1 119 48.7
Sp1g26780 Schrenkiella parvula HOM05D006797 ORTHO05D007696 1.3e-10 70.1 121 49.6
Thhalv10009126m.g Eutrema salsugineum HOM05D006797 ORTHO05D007696 1.7e-10 69.7 122 49.2
A09p35270 Brassica napus HOM05D006797 ORTHO05D007696 2.3e-10 69.3 116 50.0
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 3.0e-10 68.9 71 60.6
BcaB04g18200 Brassica carinata HOM05D006797 ORTHO05D007696 3.9e-10 68.6 123 49.6
BcaB07g32754 Brassica carinata HOM05D006797 ORTHO05D007696 3.9e-10 68.6 122 51.6
Hma1.2p1_0747F.1_g212490 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 5.1e-10 68.2 76 59.2
BolC7t41975H Brassica oleracea HOM05D006797 ORTHO05D007696 6.6e-10 67.8 122 53.3
C07p14730 Brassica napus HOM05D006797 ORTHO05D007696 1.5e-09 66.6 122 52.5
BraA09t39054Z Brassica rapa HOM05D006797 ORTHO05D007696 3.3e-09 65.5 122 46.7
BcaC05g27127 Brassica carinata HOM05D006797 ORTHO05D007696 4.3e-09 65.1 116 48.3
C05p30120 Brassica napus HOM05D006797 ORTHO05D007696 4.3e-09 65.1 116 48.3
CARHR030370 Cardamine hirsuta HOM05D006797 ORTHO05D007696 4.3e-09 65.1 123 49.6
BolC8t48187H Brassica oleracea HOM05D006797 ORTHO05D007696 5.6e-09 64.7 115 47.8
Pp3c24_14860 Physcomitrium patens HOM05D006797 ORTHO05D007696 4.7e-08 61.6 117 43.6
Cfa001151 Carpinus fangiana HOM05D000071 ORTHO05D000029 6.2e-08 61.2 165 35.2
Mapoly0051s0054 Marchantia polymorpha HOM05D006797 ORTHO05D007696 1.1e-07 60.5 130 43.1
BolC5t31749H Brassica oleracea HOM05D006797 ORTHO05D007696 1.8e-07 59.7 122 45.1
Oeu008734.1 Olea europaea HOM05D016541 ORTHO05D007696 8.9e-07 57.4 66 54.5
SMO167G0044 Selaginella moellendorffii HOM05D006797 ORTHO05D007696 1.5e-06 56.6 122 38.5


User provided reference genes

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