Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 5.1e-81 304.3 148 100.0
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.1e-50 202.6 146 71.9
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.1e-35 153.7 142 57.7
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.5e-35 153.3 147 55.1
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.9e-30 136.3 136 50.0
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 4.1e-30 135.2 127 50.4
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.2e-29 133.7 136 52.9
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.0e-28 130.6 150 46.0
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 2.3e-28 129.4 146 44.5
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 5.6e-27 124.8 147 43.5
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 9.5e-27 124.0 145 46.2
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 9.5e-27 124.0 145 46.2
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.6e-26 123.2 144 44.4
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.8e-25 119.8 145 44.1
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 8.9e-25 117.5 144 41.7
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.5e-24 116.7 144 43.8
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.6e-24 115.9 115 53.0
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 9.8e-24 114.0 144 43.1
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 1.3e-23 113.6 122 47.5
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.9e-23 112.5 148 44.6
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 8.3e-23 110.9 148 41.2
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 3.2e-22 109.0 137 44.5
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 5.4e-22 108.2 137 43.1
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 5.4e-22 108.2 132 43.2
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.0e-22 107.8 137 44.5
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.0e-22 107.8 137 44.5
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 7.0e-22 107.8 174 36.8
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 9.2e-22 107.5 127 44.9
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.6e-21 106.7 142 44.4
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.6e-21 106.7 115 49.6
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.1e-21 106.3 142 43.0
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 3.5e-21 105.5 163 40.5
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 4.6e-21 105.1 162 41.4
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 7.8e-21 104.4 146 39.7
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.0e-20 104.0 146 41.1
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.3e-20 103.6 143 39.2
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.7e-20 103.2 123 43.1
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.0e-20 102.4 118 44.1
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 3.9e-20 102.1 125 41.6
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 6.6e-20 101.3 146 40.4
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 6.6e-20 101.3 133 38.3
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.6e-20 100.9 146 39.7
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.1e-19 100.5 118 47.5
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.5e-19 99.4 148 37.2
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.5e-19 99.4 148 37.2
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.3e-19 99.0 148 37.2
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 5.6e-19 98.2 146 41.1
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 1.6e-18 96.7 126 42.9
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 2.8e-18 95.9 147 37.4
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 8.1e-18 94.4 135 38.5
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 8.1e-18 94.4 140 37.9
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.8e-17 93.2 136 39.7
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.3e-17 92.8 146 40.4
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.3e-17 92.8 146 37.0
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 2.3e-17 92.8 143 39.2
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 3.1e-17 92.4 115 44.3
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 6.8e-17 91.3 145 37.2
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 8.9e-17 90.9 134 36.6
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 8.9e-17 90.9 170 35.3
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.0e-16 89.7 146 39.7
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 2.6e-16 89.4 139 36.7
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 4.4e-16 88.6 148 38.5
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 4.4e-16 88.6 148 37.2
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.3e-15 87.0 117 41.9
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.7e-15 86.7 137 36.5
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 3.7e-15 85.5 147 34.0
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 6.4e-15 84.7 119 37.8
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 8.3e-15 84.3 129 35.7
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.1e-14 84.0 115 37.4
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 1.1e-14 84.0 145 31.7
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.1e-14 84.0 118 39.8
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.4e-14 82.8 114 37.7
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 2.4e-14 82.8 145 33.1
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.4e-14 82.8 118 36.4
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 7.1e-14 81.3 144 35.4
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 2.1e-13 79.7 108 41.7
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 3.5e-13 79.0 72 54.2
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 6.0e-13 78.2 120 35.0
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 7.8e-13 77.8 126 38.1
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.0e-12 77.4 117 40.2
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.0e-12 77.4 151 33.1
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 1.3e-12 77.0 121 36.4
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 1.7e-12 76.6 113 39.8
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 2.3e-12 76.3 115 42.6
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 5.1e-12 75.1 119 37.0
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 5.1e-12 75.1 119 36.1
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 3.3e-11 72.4 119 36.1
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 9.5e-11 70.9 146 32.9
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 1.2e-10 70.5 153 34.0
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.2e-10 70.5 140 32.9
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.6e-10 70.1 148 33.8
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 4.7e-10 68.6 106 36.8
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 8.1e-10 67.8 116 32.8
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 8.1e-10 67.8 139 34.5
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 2.4e-09 66.2 122 33.6
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 8.9e-09 64.3 142 28.9
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.2e-08 63.9 65 50.8
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.2e-08 63.9 65 50.8
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 3.4e-08 62.4 140 30.7
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 3.4e-08 62.4 119 34.5
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.3e-07 60.5 117 35.9
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 8.4e-07 57.8 151 31.8
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 8.4e-07 57.8 142 31.0
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.1e-06 57.4 117 35.9
Zm00001eb217420 Zea mays HOM05D036793 ORTHO05D019338 3.2e-06 55.8 67 35.8
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 5.4e-06 55.1 63 50.8


User provided reference genes

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