Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1504 Trochodendron aralioides HOM05D003937 ORTHO05D004583 1.0e-160 570.1 295 100.0
TAR381G0291 Trochodendron aralioides HOM05D003937 ORTHO05D004583 1.3e-107 393.7 291 73.9
Nn5g30963 Nelumbo nucifera HOM05D003937 ORTHO05D004583 1.5e-84 317.0 298 61.1
CSS0036568 Camellia sinensis var. sinensis HOM05D003937 ORTHO05D004583 7.8e-73 278.1 297 53.9
Haze_02016 Corylus avellana HOM05D003937 ORTHO05D004583 1.6e-70 270.4 261 57.1
Cfa005351 Carpinus fangiana HOM05D003937 ORTHO05D004583 4.8e-70 268.9 263 56.3
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 6.2e-70 268.5 297 54.5
Duzib052G0838 Durio zibethinus HOM05D003937 ORTHO05D004583 1.1e-69 267.7 295 55.6
CiPaw.05G091700 Carya illinoinensis HOM05D003937 ORTHO05D004583 4.0e-69 265.8 295 52.9
Thecc.02G044800 Theobroma cacao HOM05D003937 ORTHO05D004583 1.2e-68 264.2 295 55.3
Glyma.06G000500 Glycine max HOM05D003937 ORTHO05D004583 2.0e-68 263.5 287 54.4
Glyma.04G000700 Glycine max HOM05D003937 ORTHO05D004583 9.9e-68 261.2 289 54.3
TWI75G1612 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 9.9e-68 261.2 280 52.5
Gohir.D02G231300 Gossypium hirsutum HOM05D003937 ORTHO05D004583 4.2e-66 255.8 296 52.7
Gohir.A03G209600 Gossypium hirsutum HOM05D003937 ORTHO05D004583 3.5e-65 252.7 296 53.0
Duzib132G1231 Durio zibethinus HOM05D003937 ORTHO05D004583 6.0e-65 251.9 285 54.4
Gorai.005G258900 Gossypium raimondii HOM05D003937 ORTHO05D004583 3.0e-64 249.6 296 52.0
Manes.04G067300 Manihot esculenta HOM05D003937 ORTHO05D004583 5.1e-64 248.8 285 53.0
Dinv14164 Davidia involucrata HOM05D001927 ORTHO05D001972 1.9e-63 246.9 298 52.0
Gohir.A01G174900 Gossypium hirsutum HOM05D003937 ORTHO05D004583 2.5e-63 246.5 295 51.5
Phvul.006G042500 Phaseolus vulgaris HOM05D003937 ORTHO05D004583 3.7e-62 242.7 268 52.6
VMungo0540G0354 Vigna mungo HOM05D003937 ORTHO05D004583 3.7e-62 242.7 274 52.2
TPR.G38537 Trifolium pratense HOM05D003937 ORTHO05D004583 4.8e-62 242.3 284 51.8
Gohir.D01G166000 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.4e-61 240.7 295 49.8
Gorai.002G206500 Gossypium raimondii HOM05D003937 ORTHO05D004583 1.4e-61 240.7 295 49.8
COL.COLO4_17933 Corchorus olitorius HOM05D003937 ORTHO05D004583 4.0e-61 239.2 295 52.5
Medtr3g118500 Medicago truncatula HOM05D003937 ORTHO05D004583 4.0e-61 239.2 283 49.8
PSO541G3051 Papaver somniferum HOM05D003937 ORTHO05D004583 4.0e-61 239.2 287 51.9
QL11p055606 Quercus lobata HOM05D003937 ORTHO05D004583 5.3e-61 238.8 294 49.7
Lj1g0000413 Lotus japonicus HOM05D003937 ORTHO05D004583 1.2e-60 237.7 266 52.3
PSO675G5999 Papaver somniferum HOM05D003937 ORTHO05D004583 1.5e-60 237.3 284 51.8
Atru.chr5.3549 Acer truncatum HOM05D003937 ORTHO05D004583 3.4e-60 236.1 296 49.0
QL11p055907 Quercus lobata HOM05D003937 ORTHO05D004583 4.5e-60 235.7 294 49.3
arahy.Tifrunner.gnm1.ann1.G18Z51 Arachis hypogaea HOM05D003937 ORTHO05D004583 1.7e-59 233.8 278 51.4
Ciclev10028873m.g Citrus clementina HOM05D003937 ORTHO05D004583 2.2e-59 233.4 282 51.4
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla HOM05D003937 ORTHO05D004583 1.9e-58 230.3 301 49.5
Cpa.g.sc20.204 Carica papaya HOM05D003937 ORTHO05D004583 4.2e-58 229.2 284 48.2
Ca_16692_v3 Cicer arietinum L. HOM05D003937 ORTHO05D004583 7.1e-58 228.4 250 53.6
Potri.009G166100 Populus trichocarpa HOM05D003937 ORTHO05D004583 1.2e-57 227.6 296 48.6
Aqoxy5G01031 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 2.1e-57 226.9 295 48.8
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea HOM05D003937 ORTHO05D004583 2.1e-57 226.9 267 51.7
CANSAT25G1327 Cannabis sativa HOM05D003937 ORTHO05D004583 5.1e-56 222.2 296 47.3
ClCG02G009960 Citrullus lanatus HOM05D003937 ORTHO05D004583 1.1e-55 221.1 285 48.8
TWI79G1491 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 6.2e-54 215.3 260 47.7
Prupe.8G178200 Prunus persica HOM05D003937 ORTHO05D004583 5.3e-53 212.2 286 45.5
Potri.004G205200 Populus trichocarpa HOM05D003937 ORTHO05D004583 9.0e-53 211.5 296 47.0
MD05G1134400 Malus domestica HOM05D003937 ORTHO05D004583 4.5e-52 209.1 275 49.8
Actinidia32012 Actinidia chinensis HOM05D003937 ORTHO05D004583 1.7e-51 207.2 299 48.2
CsaV3_6G010160 Cucumis sativus L. HOM05D003937 ORTHO05D004583 6.5e-51 205.3 294 45.2
vmacro17300 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 1.4e-50 204.1 279 46.2
EL10Ac9g21245 Beta vulgaris HOM05D003937 ORTHO05D004583 3.2e-50 203.0 288 45.5
PGR142G1962 Punica granatum HOM05D003937 ORTHO05D004583 4.2e-50 202.6 284 47.9
MD10G1139500 Malus domestica HOM05D003937 ORTHO05D004583 5.5e-50 202.2 285 47.0
Rhsim05G0047600 Rhododendron simsii HOM05D003937 ORTHO05D004583 7.9e-49 198.4 299 44.1
Lalb_Chr08g0246851 Lupinus albus HOM05D003937 ORTHO05D004583 2.3e-48 196.8 254 49.6
Aqoxy6G01687 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 4.3e-47 192.6 298 44.3
AUR62011702 Chenopodium quinoa HOM05D003937 ORTHO05D004583 1.4e-45 187.6 281 43.8
Sed0010938 Sechium edule HOM05D003937 ORTHO05D004583 4.1e-45 186.0 283 42.4
Prupe.5G011500 Prunus persica HOM05D003937 ORTHO05D004583 9.0e-45 184.9 288 44.4
Cfa014094 Carpinus fangiana HOM05D003937 ORTHO05D004583 2.6e-44 183.3 298 41.9
Eucgr.I01517 Eucalyptus grandis HOM05D003937 ORTHO05D004583 3.4e-44 183.0 272 43.4
Sabra04G0138500 Salix brachista HOM05D003937 ORTHO05D004583 3.4e-44 183.0 261 46.7
arahy.Tifrunner.gnm1.ann1.13SVP6 Arachis hypogaea HOM05D003937 ORTHO05D004583 4.5e-44 182.6 211 51.2
Lj4A806T76 Lonicera japonica HOM05D003937 ORTHO05D004583 5.9e-44 182.2 296 41.9
arahy.Tifrunner.gnm1.ann1.BKYH70 Arachis hypogaea HOM05D003937 ORTHO05D004583 1.0e-43 181.4 257 47.5
AUR62012919 Chenopodium quinoa HOM05D003937 ORTHO05D004583 4.2e-42 176.0 281 41.3
Sc18g0006030 Simmondsia chinensis HOM05D003937 ORTHO05D004583 4.2e-42 176.0 291 42.3
Rhsim07G0256300 Rhododendron simsii HOM05D003937 ORTHO05D004583 7.2e-42 175.3 289 43.9
Hund06165 Selenicereus undatus HOM05D003937 ORTHO05D004583 1.6e-41 174.1 259 42.9
Actinidia37917 Actinidia chinensis HOM05D003937 ORTHO05D004583 2.1e-41 173.7 284 41.5
vmacro04409 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 3.6e-41 172.9 268 44.0
QL02p014402 Quercus lobata HOM05D003937 ORTHO05D004583 7.9e-41 171.8 264 43.6
RcHm_v2.0_Chr7g0215391 Rosa chinensis HOM05D003937 ORTHO05D004583 3.0e-40 169.9 299 39.8
Haze_22797 Corylus avellana HOM05D003937 ORTHO05D004583 1.1e-39 167.9 265 44.2
arahy.Tifrunner.gnm1.ann1.5851ZQ Arachis hypogaea HOM05D003937 ORTHO05D004583 1.5e-39 167.5 224 47.3
Haze_22798 Corylus avellana HOM05D003937 ORTHO05D004583 1.7e-38 164.1 265 42.6
Nitab4.5_0000588g0020 Nicotiana tabacum HOM05D003937 ORTHO05D004583 1.7e-38 164.1 301 38.9
Sopen04g036060 Solanum pennellii HOM05D003937 ORTHO05D004583 3.7e-38 162.9 300 37.7
Solyc04g082450.3 Solanum lycopersicum HOM05D003937 ORTHO05D004583 1.1e-37 161.4 300 37.3
Oeu046353.1 Olea europaea HOM05D003937 ORTHO05D004583 1.4e-37 161.0 282 40.8
Cc10_g00590 Coffea canephora HOM05D003937 ORTHO05D004583 1.0e-35 154.8 268 40.3
arahy.Tifrunner.gnm1.ann1.2P21EX Arachis hypogaea HOM05D003937 ORTHO05D004583 1.3e-35 154.5 248 43.1
CAN.G311.122 Capsicum annuum HOM05D003937 ORTHO05D004583 1.7e-35 154.1 292 38.0
MD06G1009100 Malus domestica HOM05D003937 ORTHO05D004583 1.7e-35 154.1 286 39.2
Nitab4.5_0011212g0050 Nicotiana tabacum HOM05D003937 ORTHO05D004583 2.9e-35 153.3 273 39.2
SalBow1G5464 Salvia bowleyana HOM05D003937 ORTHO05D004583 2.9e-35 153.3 290 36.6
Peaxi162Scf00362g00245 Petunia axillaris HOM05D003937 ORTHO05D004583 6.5e-35 152.1 280 40.7
MSTRG.22102 Avicennia marina HOM05D003937 ORTHO05D004583 1.4e-34 151.0 295 37.3
DCAR_013923 Daucus carota HOM05D003937 ORTHO05D004583 2.5e-34 150.2 302 37.4
FvH4_5g25250 Fragaria vesca HOM05D003937 ORTHO05D004583 7.2e-34 148.7 286 38.8
Migut.B00012 Erythranthe guttata HOM05D003937 ORTHO05D004583 1.6e-33 147.5 311 37.3
CAN.G1725.8 Capsicum annuum HOM05D003937 ORTHO05D004583 3.6e-33 146.4 278 39.2
MSTRG.24495 Avicennia marina HOM05D003937 ORTHO05D004583 1.8e-32 144.1 296 36.1
Solyc01g112180.4 Solanum lycopersicum HOM05D003937 ORTHO05D004583 3.9e-32 142.9 278 37.4
Nitab4.5_0000783g0190 Nicotiana tabacum HOM05D003937 ORTHO05D004583 8.8e-32 141.7 267 37.8
PGSC0003DMG400014661 Solanum tuberosum HOM05D003937 ORTHO05D004583 8.8e-32 141.7 278 38.5
Oeu033835.1 Olea europaea HOM05D003937 ORTHO05D004583 1.5e-31 141.0 262 40.8
DCAR_016775 Daucus carota HOM05D003937 ORTHO05D004583 2.6e-31 140.2 286 38.5
Sopen01g054230 Solanum pennellii HOM05D003937 ORTHO05D004583 3.3e-31 139.8 278 37.4
PGSC0003DMG400009905 Solanum tuberosum HOM05D003937 ORTHO05D004583 4.4e-31 139.4 281 37.4
DCAR_015663 Daucus carota HOM05D003937 ORTHO05D004583 2.2e-30 137.1 263 39.5
Aqoxy6G01688 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 4.8e-30 136.0 276 38.8
HanXRQChr12g0374421 Helianthus annuus HOM05D003937 ORTHO05D004583 8.2e-30 135.2 274 39.8
Oeu003435.2 Olea europaea HOM05D003937 ORTHO05D004583 1.2e-28 131.3 242 38.8
SalBow6G3106 Salvia bowleyana HOM05D003937 ORTHO05D004583 1.5e-28 131.0 293 37.2
Lj5P172T81 Lonicera japonica HOM05D003937 ORTHO05D004583 7.7e-28 128.6 191 44.5
ECA233G5124 Erigeron canadensis HOM05D003937 ORTHO05D004583 6.5e-27 125.6 296 35.1
FAN04G2017 Fragaria x ananassa HOM05D003937 ORTHO05D004583 8.5e-27 125.2 265 37.4
MBI08_g12714_MAGBIO Magnolia biondii HOM05D003937 ORTHO05D004583 1.5e-26 124.4 128 57.0
CANSAT25G1278 Cannabis sativa HOM05D003937 ORTHO05D004583 7.2e-26 122.1 286 35.0
Psat5g000520 Pisum sativum HOM05D003937 ORTHO05D004583 7.2e-26 122.1 200 43.0
FAN18G0752 Fragaria x ananassa HOM05D003937 ORTHO05D004583 9.4e-26 121.7 265 36.6
FAN08G1258 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.6e-25 120.9 262 35.5
Nn6g31719 Nelumbo nucifera HOM05D003937 ORTHO05D004583 2.7e-25 120.2 120 60.0
GSVIVG01009897001 Vitis vinifera HOM05D003937 ORTHO05D004583 2.7e-25 120.2 122 56.6
MSTRG.16955 Avicennia marina HOM05D003937 ORTHO05D004583 1.0e-24 118.2 290 34.1
GSVIVG01026659001 Vitis vinifera HOM05D003937 ORTHO05D004583 2.3e-24 117.1 146 50.0
arahy.Tifrunner.gnm1.ann1.X4XIB4 Arachis hypogaea HOM05D003937 ORTHO05D004583 3.9e-24 116.3 177 45.8
Dinv31951 Davidia involucrata HOM05D003937 ORTHO05D004583 5.2e-24 115.9 135 57.0
GSVIVG01023888001 Vitis vinifera HOM05D003937 ORTHO05D004583 5.2e-24 115.9 117 56.4
Lalb_Chr11g0061231 Lupinus albus HOM05D003937 ORTHO05D004583 4.4e-23 112.8 240 37.1
Sed0014450 Sechium edule HOM05D003937 ORTHO05D004583 4.4e-23 112.8 281 34.2
FAN27G2747 Fragaria x ananassa HOM05D003937 ORTHO05D004583 3.7e-22 109.8 145 51.0
FvH4_2g16620 Fragaria vesca HOM05D003937 ORTHO05D004583 4.8e-22 109.4 145 49.7
FAN15G3453 Fragaria x ananassa HOM05D003937 ORTHO05D004583 4.8e-22 109.4 145 49.7
FAN24G0691 Fragaria x ananassa HOM05D003937 ORTHO05D004583 4.8e-22 109.4 145 49.7
RcHm_v2.0_Chr6g0280681 Rosa chinensis HOM05D003937 ORTHO05D004583 4.8e-22 109.4 146 50.0
ECA233G2935 Erigeron canadensis HOM05D003937 ORTHO05D004583 6.3e-22 109.0 280 36.4
Migut.N02961 Erythranthe guttata HOM05D003937 ORTHO05D004583 1.1e-21 108.2 302 33.4
FAN20G0177 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.8e-21 107.5 145 48.3
MELO3C026537.2 Cucumis melo HOM05D003937 ORTHO05D004583 3.1e-21 106.7 279 32.3
HanXRQChr12g0367561 Helianthus annuus HOM05D003937 ORTHO05D004583 2.6e-20 103.6 296 31.8
HPP92_021046 Vanilla planifolia HOM05D003937 ORTHO05D004583 2.6e-20 103.6 259 33.2
SGA_v2.0_scaffold32G13344 Striga asiatica HOM05D003937 ORTHO05D004583 7.7e-20 102.1 220 36.8
ATR0661G493 Amborella trichopoda HOM05D003937 ORTHO05D004583 1.3e-19 101.3 371 30.2
ECA246G4591 Erigeron canadensis HOM05D003937 ORTHO05D004583 1.3e-19 101.3 229 35.8
ClCG08G009390 Citrullus lanatus HOM05D003937 ORTHO05D004583 1.6e-17 94.4 268 31.0
Lsat_1_v5_gn_8_26360 Lactuca sativa HOM05D003937 ORTHO05D004583 1.6e-17 94.4 273 31.9
Peaxi162Scf00711g00414 Petunia axillaris HOM05D003937 ORTHO05D004583 1.6e-17 94.4 266 32.3
SGA_v2.0_scaffold364G49977 Striga asiatica HOM05D003937 ORTHO05D004583 2.1e-17 94.0 299 31.1
CsaV3_6G031550 Cucumis sativus L. HOM05D003937 ORTHO05D004583 3.6e-17 93.2 275 29.5
Os09g0549400 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 1.0e-16 91.7 87 54.0
CDE05G2511 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.3e-16 90.5 275 31.3
unitig_8.g3603 Utricularia gibba HOM05D000001 ORTHO05D000003 2.3e-16 90.5 259 30.9
HanXRQChr13g0409731 Helianthus annuus HOM05D003937 ORTHO05D004583 3.0e-16 90.1 101 45.5
Os04g0136900 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 6.8e-16 89.0 110 49.1
Zm00001eb420050 Zea mays HOM05D003937 ORTHO05D004583 8.8e-16 88.6 236 35.2
Lsat_1_v5_gn_3_48780 Lactuca sativa HOM05D003937 ORTHO05D004583 5.7e-15 85.9 203 37.9
Sp7g37440 Schrenkiella parvula HOM05D003937 ORTHO05D004583 7.5e-15 85.5 69 63.8
AL7G10200 Arabidopsis lyrata HOM05D003937 ORTHO05D004583 1.3e-14 84.7 69 60.9
AT2G45250 Arabidopsis thaliana HOM05D003937 ORTHO05D004583 1.3e-14 84.7 69 60.9
SEGI_28645 Sequoiadendron giganteum HOM05D003937 ORTHO05D004583 1.3e-14 84.7 215 35.3
CDE06G0218 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.2e-14 84.0 122 45.1
AT4G38280 Arabidopsis thaliana HOM05D003937 ORTHO05D004583 2.8e-14 83.6 101 46.5
Zm00001eb104250 Zea mays HOM05D003937 ORTHO05D004583 1.8e-13 80.9 272 32.4
CiPaw.07G137900 Carya illinoinensis HOM05D003937 ORTHO05D004583 4.1e-13 79.7 162 35.2
Aa31LG6G16740 Aethionema arabicum HOM05D003937 ORTHO05D004583 1.6e-12 77.8 212 34.0
BraA08t34322Z Brassica rapa HOM05D003937 ORTHO05D004583 1.6e-12 77.8 95 48.4
BcaB03g12256 Brassica carinata HOM05D003937 ORTHO05D004583 3.5e-12 76.6 85 51.8
Carub.0007s0022 Capsella rubella HOM05D003937 ORTHO05D004583 5.9e-12 75.9 97 47.4
Cc09_g10730 Coffea canephora HOM05D003937 ORTHO05D004583 2.2e-11 73.9 76 52.6
CDE05G1352 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.9e-11 73.6 237 31.2
Thhalv10026442m.g Eutrema salsugineum HOM05D003937 ORTHO05D004583 5.0e-11 72.8 176 35.8
C03p77740 Brassica napus HOM05D003937 ORTHO05D004583 8.5e-11 72.0 67 59.7
AagrBONN_evm.TU.Sc2ySwM_117.297 Anthoceros agrestis HOM05D003937 ORTHO05D004583 1.1e-10 71.6 190 30.5
BolC3t20032H Brassica oleracea HOM05D003937 ORTHO05D004583 2.5e-10 70.5 67 58.2
A08p23700 Brassica napus HOM05D003937 ORTHO05D004583 4.2e-10 69.7 67 58.2
SMO347G0358 Selaginella moellendorffii HOM05D003937 ORTHO05D004583 1.6e-09 67.8 158 36.7
vmacro08750 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 1.6e-09 67.8 68 54.4
CDE06G2177 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.7e-09 67.0 158 37.3
SGA_v2.0_scaffold58G20314 Striga asiatica HOM05D003937 ORTHO05D004583 4.7e-09 66.2 178 32.0
HPP92_020992 Vanilla planifolia HOM05D003937 ORTHO05D004583 4.7e-09 66.2 210 28.6
HPP92_025977 Vanilla planifolia HOM05D003937 ORTHO05D004583 4.7e-09 66.2 235 29.4
CARHR294070 Cardamine hirsuta HOM05D003937 ORTHO05D004583 8.0e-09 65.5 65 50.8
Pp3c19_6980 Physcomitrium patens HOM05D003937 ORTHO05D004583 1.0e-08 65.1 196 32.1
Mapoly0074s0020 Marchantia polymorpha HOM05D003937 ORTHO05D004583 4.0e-08 63.2 169 31.4
SEGI_41193 Sequoiadendron giganteum HOM05D003937 ORTHO05D004583 2.8e-06 57.0 112 37.5


User provided reference genes

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