Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 7.3e-192 673.7 336 100.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.8e-158 562.8 333 81.1
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.5e-157 558.1 335 80.9
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 3.9e-153 545.0 335 79.7
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.1e-153 544.7 331 79.8
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 3.7e-151 538.5 337 78.6
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 9.0e-150 533.9 335 79.1
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-149 533.5 335 77.0
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 4.5e-149 531.6 332 77.1
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 5.9e-149 531.2 335 77.0
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 5.9e-149 531.2 332 78.0
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.7e-148 529.6 335 76.7
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 2.2e-148 529.3 335 77.3
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.8e-148 528.5 335 76.7
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.1e-147 526.9 338 77.2
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-147 526.9 335 76.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.9e-147 526.2 335 76.1
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.5e-147 525.8 309 83.8
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 5.5e-147 524.6 332 76.8
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.1e-146 522.7 326 78.2
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.1e-146 522.7 335 77.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.7e-146 522.3 333 76.9
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 4.6e-146 521.5 335 76.1
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.0e-145 518.8 326 77.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 2.0e-144 516.2 334 75.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 7.4e-144 514.2 333 74.8
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.8e-143 512.3 326 75.2
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 3.7e-143 511.9 331 76.4
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 4.8e-143 511.5 333 73.6
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 1.8e-142 509.6 333 73.9
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 6.9e-142 507.7 333 76.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.0e-141 506.1 332 73.8
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.3e-140 503.4 336 72.9
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.7e-140 503.1 328 73.2
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 5.0e-140 501.5 331 75.5
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.4e-139 500.0 332 75.0
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.9e-139 499.6 335 74.3
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.5e-139 499.2 325 73.8
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 3.2e-139 498.8 336 72.0
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 7.2e-139 497.7 333 71.2
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 2.1e-138 496.1 332 72.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.1e-138 496.1 326 73.6
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 6.1e-138 494.6 336 72.6
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.0e-137 493.8 325 73.2
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 3.0e-137 492.3 334 71.6
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.0e-137 492.3 335 72.8
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.1e-137 491.5 334 71.3
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 6.7e-137 491.1 325 72.6
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.0e-136 489.6 336 73.8
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 3.3e-136 488.8 333 70.0
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 5.7e-136 488.0 338 69.8
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 7.4e-136 487.6 327 73.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 9.7e-136 487.3 334 71.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 9.7e-136 487.3 331 71.3
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.7e-135 486.5 331 72.2
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 3.7e-135 485.3 335 70.7
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.1e-134 483.8 331 71.0
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.8e-134 483.0 331 72.2
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 3.1e-134 482.3 331 70.1
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 5.3e-134 481.5 338 70.1
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 4.5e-133 478.4 331 70.4
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 4.5e-133 478.4 331 70.7
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.9e-132 475.7 334 71.3
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 2.7e-130 469.2 334 70.1
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 4.7e-130 468.4 342 68.7
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.4e-129 466.8 332 69.6
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 5.2e-129 464.9 327 69.7
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.3e-128 462.2 337 68.0
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 4.4e-128 461.8 333 69.4
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 9.1e-126 454.1 335 67.8
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 3.5e-125 452.2 333 71.2
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 4.5e-125 451.8 341 66.9
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 5.9e-125 451.4 336 66.1
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.2e-124 449.5 317 68.5
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.5e-123 446.0 322 68.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.2e-123 445.7 323 68.1
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.2e-122 443.7 333 66.7
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.7e-122 442.6 322 67.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.7e-122 442.6 322 67.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.7e-122 442.6 322 67.4
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 3.6e-122 442.2 322 67.7
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 3.6e-122 442.2 322 67.7
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.6e-122 442.2 332 67.2
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.0e-121 440.7 333 65.5
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.8e-121 439.9 336 66.4
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 3.0e-121 439.1 334 65.6
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 5.2e-121 438.3 323 67.2
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 5.9e-117 424.9 338 65.7
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-112 410.6 331 64.7
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 6.6e-108 394.8 307 63.5
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 6.8e-105 384.8 329 59.6
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-103 380.6 205 89.8
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 8.3e-103 377.9 312 59.3
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.1e-102 377.5 295 65.4
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 3.4e-88 329.3 214 76.2
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 6.0e-85 318.5 307 53.1
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-84 317.0 305 54.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.0e-84 316.2 258 63.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.1e-84 315.5 338 51.2
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.9e-81 304.7 203 71.9
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.3e-68 263.5 161 80.1
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.3e-66 257.7 202 63.4
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.0e-64 250.4 163 73.0
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 9.9e-64 248.1 177 66.7
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 9.6e-59 231.5 132 82.6
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.4e-57 226.9 256 52.3
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 8.4e-55 218.4 283 46.3
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-54 218.0 156 69.2
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.9e-54 217.2 130 84.6
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.7e-45 186.8 150 62.7
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.3e-44 183.7 144 65.3
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.0e-40 170.6 90 87.8
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.1e-29 134.0 124 58.1
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.1e-25 120.2 107 53.3
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.7e-20 102.4 72 69.4
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 6.5e-15 85.9 65 63.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.5e-14 84.7 197 34.0
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.3e-10 71.6 119 36.1
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 2.9e-07 60.5 173 29.5
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.1e-06 58.5 192 26.6
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 3.2e-06 57.0 175 27.4
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 5.5e-06 56.2 280 22.5


User provided reference genes

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