Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 5.5e-72 274.2 143 100.0
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 5.5e-72 274.2 143 100.0
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 2.0e-50 202.6 148 74.3
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.6e-45 185.7 143 68.5
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 4.8e-44 181.4 151 67.5
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.4e-43 179.1 140 70.0
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 2.4e-43 179.1 144 66.0
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 2.4e-43 179.1 151 65.6
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 3.1e-43 178.7 145 68.3
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 9.1e-43 177.2 148 62.8
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.6e-42 176.4 149 64.4
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 3.5e-42 175.3 149 63.8
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 4.5e-42 174.9 145 64.8
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 7.7e-42 174.1 151 64.9
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 1.0e-41 173.7 149 62.4
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 1.3e-41 173.3 146 63.7
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 3.8e-41 171.8 151 61.6
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 5.0e-41 171.4 150 64.0
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 5.0e-41 171.4 138 68.1
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 6.5e-41 171.0 143 65.0
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 6.5e-41 171.0 146 64.4
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 6.5e-41 171.0 147 63.9
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 3.3e-40 168.7 147 61.9
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 4.2e-40 168.3 143 64.3
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 7.2e-40 167.5 158 58.2
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 7.2e-40 167.5 153 60.8
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 7.2e-40 167.5 146 61.0
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 7.2e-40 167.5 140 65.7
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.5e-40 167.2 147 61.9
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 9.5e-40 167.2 147 61.9
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.2e-39 166.8 154 61.0
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.6e-39 165.2 141 63.1
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.6e-39 165.2 147 61.9
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.0e-38 163.7 141 62.4
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 1.0e-38 163.7 144 63.2
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.4e-38 163.3 153 62.1
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 1.4e-38 163.3 143 62.9
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.8e-38 162.9 141 63.8
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.8e-38 162.9 135 63.7
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 1.8e-38 162.9 149 61.7
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.3e-38 162.5 145 61.4
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 2.3e-38 162.5 149 60.4
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 3.0e-38 162.2 154 60.4
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 6.8e-38 161.0 143 60.8
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.8e-38 161.0 140 62.9
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 8.9e-38 160.6 143 61.5
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 8.9e-38 160.6 143 61.5
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 1.2e-37 160.2 140 64.3
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 1.2e-37 160.2 140 64.3
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.2e-37 160.2 148 58.8
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 4.4e-37 158.3 136 62.5
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 4.4e-37 158.3 143 62.2
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.7e-37 157.9 136 62.5
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.3e-36 156.8 143 61.5
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.7e-36 156.4 151 63.6
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 4.9e-36 154.8 139 61.2
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 6.3e-36 154.5 142 57.7
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 6.3e-36 154.5 147 59.2
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 8.3e-36 154.1 133 60.9
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 1.4e-35 153.3 153 54.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 1.8e-35 152.9 139 59.7
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 1.8e-35 152.9 136 61.0
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.4e-35 152.5 139 60.4
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 4.1e-35 151.8 155 54.8
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 4.1e-35 151.8 141 58.9
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 4.1e-35 151.8 139 60.4
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 4.1e-35 151.8 139 60.4
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 5.4e-35 151.4 148 58.8
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 5.4e-35 151.4 135 60.0
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 9.2e-35 150.6 141 58.2
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.2e-34 150.2 139 59.7
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 1.6e-34 149.8 145 57.2
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.6e-34 149.8 138 60.1
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.0e-34 149.4 127 65.4
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.0e-34 149.4 125 64.0
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 3.5e-34 148.7 139 56.8
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 4.5e-34 148.3 154 52.6
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 7.8e-34 147.5 126 64.3
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 1.7e-33 146.4 139 54.7
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.7e-33 146.4 139 56.1
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 2.3e-33 146.0 139 53.2
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 2.3e-33 146.0 138 57.2
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.3e-33 146.0 139 58.3
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 2.9e-33 145.6 139 56.8
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 3.8e-33 145.2 139 57.6
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 5.0e-33 144.8 141 61.0
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 5.0e-33 144.8 136 58.1
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 6.6e-33 144.4 140 57.1
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 8.6e-33 144.1 138 60.9
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 1.1e-32 143.7 139 55.4
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 1.5e-32 143.3 139 54.7
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 2.5e-32 142.5 135 61.5
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 5.6e-32 141.4 139 55.4
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 2.8e-31 139.0 139 52.5
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 1.8e-30 136.3 136 58.1
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.5e-29 133.3 135 56.3
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 2.0e-29 132.9 133 52.6
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 2.0e-29 132.9 133 52.6
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 2.0e-29 132.9 133 52.6
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 2.0e-29 132.9 133 52.6
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 3.4e-29 132.1 141 53.9
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 4.4e-29 131.7 135 56.3
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 4.4e-29 131.7 133 53.4
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 4.4e-29 131.7 139 52.5
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.3e-28 130.2 134 54.5
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 2.2e-28 129.4 135 55.6
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 8.3e-28 127.5 152 49.3
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 2.4e-27 125.9 141 50.4
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 1.2e-26 123.6 141 48.9
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 4.6e-26 121.7 143 47.6
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 7.8e-26 120.9 152 46.7
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 1.0e-25 120.6 135 46.7
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 1.2e-23 113.6 140 46.4
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 6.2e-23 111.3 114 54.4
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 5.2e-22 108.2 136 43.4
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 6.8e-22 107.8 117 53.0
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 2.0e-21 106.3 134 44.0
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 2.0e-21 106.3 131 50.4
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 2.6e-21 105.9 126 48.4
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 2.6e-21 105.9 142 43.7
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 4.6e-18 95.1 119 46.2
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 6.0e-18 94.7 136 42.6
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.8e-15 85.9 66 63.6
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 1.1e-14 84.0 57 66.7
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 3.4e-13 79.0 69 56.5
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 2.9e-12 75.9 58 63.8
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.4e-11 73.6 111 41.4
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 2.1e-10 69.7 53 58.5
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 6.0e-10 68.2 134 33.6
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 3.0e-09 65.9 48 68.8
Zm00001eb181930 Zea mays HOM05D001107 ORTHO05D007353 3.6e-07 58.9 60 58.3
Cre01.g031250 Chlamydomonas reinhardtii HOM05D006047 ORTHO05D007353 1.8e-06 56.6 124 33.1


User provided reference genes

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