Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 6.7e-76 287.3 153 100.0
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.0e-47 193.7 156 68.6
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.5e-38 163.3 158 63.9
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 1.8e-36 156.4 156 59.0
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 9.2e-33 144.1 158 57.0
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 1.1e-30 137.1 158 53.8
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 5.6e-30 134.8 155 49.0
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 9.5e-30 134.0 155 54.8
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 6.8e-28 127.9 155 50.3
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 2.2e-26 122.9 164 54.3
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 1.6e-24 116.7 159 50.9
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 3.5e-24 115.5 160 46.9
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 3.0e-23 112.5 156 46.8
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 5.0e-23 111.7 161 45.3
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 8.6e-23 110.9 158 47.5
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.1e-22 110.5 158 46.8
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.5e-22 110.2 159 49.1
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 9.5e-22 107.5 159 45.3
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 1.4e-20 103.6 157 44.6
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 1.8e-20 103.2 158 45.6
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 2.3e-20 102.8 164 43.9
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 6.8e-20 101.3 157 43.3
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 2.0e-19 99.8 185 41.1
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 6.4e-18 94.7 162 43.2
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 8.3e-18 94.4 160 41.2
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 4.1e-17 92.0 157 42.0
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 4.6e-16 88.6 162 41.4
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 1.7e-15 86.7 125 44.8
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 1.7e-15 86.7 160 43.1
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 2.3e-15 86.3 141 42.6
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 3.0e-15 85.9 160 40.0
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 3.0e-15 85.9 160 40.0
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 6.6e-15 84.7 156 39.7
TAR626G1415 Trochodendron aralioides HOM05D007673 ORTHO05D009278 8.6e-15 84.3 97 56.7
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 1.1e-14 84.0 160 43.1
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 2.5e-14 82.8 160 39.4
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 5.6e-14 81.6 156 37.8
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 5.6e-14 81.6 155 38.1
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 7.3e-14 81.3 141 41.1
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 2.8e-13 79.3 150 42.7
TAR362G0190 Trochodendron aralioides HOM05D007673 ORTHO05D009278 2.8e-13 79.3 91 56.0
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 4.7e-13 78.6 158 38.0
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.4e-12 77.0 160 38.1
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 1.8e-12 76.6 167 38.9
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 2.3e-12 76.3 162 36.4
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 4.0e-12 75.5 158 41.1
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 1.2e-11 73.9 173 38.7
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 2.0e-11 73.2 162 40.1
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 2.0e-11 73.2 164 39.6
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 7.6e-11 71.2 157 38.9
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 9.9e-11 70.9 160 40.0
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 9.9e-11 70.9 163 38.0
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 1.3e-10 70.5 157 35.7
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 2.2e-10 69.7 163 38.0
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 2.2e-10 69.7 161 39.1
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 4.9e-10 68.6 159 37.1
Dinv42922 Davidia involucrata HOM05D012006 ORTHO05D014172 6.4e-10 68.2 77 48.1
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 8.4e-10 67.8 157 38.9
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 8.4e-10 67.8 157 38.9
Potri.006G059900 Populus trichocarpa HOM05D012006 ORTHO05D014172 8.4e-10 67.8 82 45.1
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 1.9e-09 66.6 153 39.2
DCAR_014921 Daucus carota HOM05D007673 ORTHO05D009278 2.4e-09 66.2 92 46.7
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 4.1e-09 65.5 159 37.1
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 4.1e-09 65.5 161 33.5
DCAR_017766 Daucus carota HOM05D007673 ORTHO05D009278 5.4e-09 65.1 96 44.8
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 5.4e-09 65.1 162 38.9
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 9.2e-09 64.3 157 39.5
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 1.2e-08 63.9 153 37.3
MSTRG.6086 Avicennia marina HOM05D007673 ORTHO05D009278 4.6e-08 62.0 159 37.1
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 4.6e-08 62.0 163 35.6
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 1.0e-07 60.8 157 38.9
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 2.3e-07 59.7 142 38.0
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 3.0e-07 59.3 206 32.0
vmacro21889 Vaccinium macrocarpon HOM05D007673 ORTHO05D009278 3.0e-07 59.3 183 32.8
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 6.6e-07 58.2 156 36.5
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 8.6e-07 57.8 93 44.1
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 1.5e-06 57.0 167 32.9
Lsat_1_v5_gn_8_63020 Lactuca sativa HOM05D007673 ORTHO05D009278 2.5e-06 56.2 97 44.3
Gohir.D06G050300 Gossypium hirsutum HOM05D012006 ORTHO05D014172 3.3e-06 55.8 70 42.9
Gorai.010G057200 Gossypium raimondii HOM05D012006 ORTHO05D014172 3.3e-06 55.8 70 42.9
SalBow1G8253 Salvia bowleyana HOM05D007673 ORTHO05D009278 3.3e-06 55.8 157 37.6
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 4.3e-06 55.5 178 33.1
Gohir.A06G051301 Gossypium hirsutum HOM05D012006 ORTHO05D014172 5.6e-06 55.1 70 41.4
Sabra06G0043200 Salix brachista HOM05D012006 ORTHO05D014172 5.6e-06 55.1 76 43.4


User provided reference genes

Program Settings