Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 2.1e-106 389.0 197 100.0
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 8.3e-103 377.1 197 96.4
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.8e-81 306.2 189 79.4
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.9e-75 286.2 176 79.5
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 2.5e-75 285.8 187 75.4
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.8e-73 279.6 184 74.5
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 4.0e-73 278.5 187 76.5
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 5.2e-73 278.1 182 75.3
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.2e-72 276.9 193 73.6
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 7.6e-72 274.2 188 74.5
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 8.4e-71 270.8 181 74.6
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.4e-70 270.0 194 71.6
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 3.2e-70 268.9 185 73.0
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 5.4e-70 268.1 189 72.0
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.2e-69 266.9 184 73.4
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 2.1e-69 266.2 166 78.3
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 2.1e-69 266.2 194 71.6
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 3.5e-69 265.4 177 73.4
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.6e-69 265.0 191 72.8
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 6.0e-69 264.6 185 71.9
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 1.3e-68 263.5 182 74.2
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.7e-68 263.1 184 71.2
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.3e-68 262.7 177 73.4
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 3.0e-68 262.3 195 69.7
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 5.1e-68 261.5 177 73.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 6.6e-68 261.2 204 68.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.6e-68 261.2 191 71.2
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 6.6e-68 261.2 180 72.2
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.1e-67 260.4 191 71.7
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.5e-67 260.0 197 70.6
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 3.3e-67 258.8 197 70.1
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.3e-67 258.8 181 71.3
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.8e-66 255.8 171 71.3
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 8.1e-66 254.2 187 72.2
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.4e-65 253.4 179 70.9
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 1.8e-65 253.1 176 69.3
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 2.4e-65 252.7 187 66.3
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 5.3e-65 251.5 194 68.0
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 9.0e-65 250.8 187 71.1
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.2e-64 250.4 179 72.1
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 3.4e-64 248.8 188 69.1
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 5.8e-64 248.1 194 69.1
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.7e-63 246.5 179 67.6
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 1.7e-63 246.5 188 66.0
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 1.7e-63 246.5 165 73.3
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 2.9e-63 245.7 184 66.3
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 3.8e-63 245.4 174 68.4
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 3.8e-63 245.4 189 66.1
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 3.8e-63 245.4 181 69.6
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.1e-62 243.8 183 66.1
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.4e-62 243.4 192 67.2
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.9e-62 243.0 178 68.5
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 5.4e-62 241.5 175 70.9
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 7.1e-62 241.1 186 67.2
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.6e-61 240.0 192 63.5
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 4.6e-61 238.4 159 74.2
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 4.6e-61 238.4 239 54.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 7.8e-61 237.7 172 66.3
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 1.0e-60 237.3 187 63.6
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.7e-60 236.5 165 68.5
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 3.0e-60 235.7 189 63.5
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.9e-60 235.3 178 68.5
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.5e-59 233.4 173 64.7
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 4.3e-59 231.9 167 67.7
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 5.6e-59 231.5 180 66.7
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.3e-59 231.1 177 65.5
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 4.0e-57 225.3 181 61.3
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 9.0e-57 224.2 181 61.3
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 2.6e-56 222.6 169 65.1
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 4.5e-56 221.9 185 65.4
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 4.5e-56 221.9 169 65.1
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.7e-55 219.9 132 80.3
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 2.9e-55 219.2 190 62.1
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 2.9e-55 219.2 170 64.1
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 3.8e-55 218.8 169 63.3
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 3.8e-55 218.8 190 62.1
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 3.8e-55 218.8 141 74.5
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 4.9e-55 218.4 171 61.4
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 6.4e-55 218.0 170 63.5
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 6.4e-55 218.0 174 63.2
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 8.4e-55 217.6 134 80.6
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 8.4e-55 217.6 170 63.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.1e-54 217.2 171 60.8
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-54 216.9 140 75.0
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 5.4e-54 214.9 185 58.9
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.2e-53 213.8 169 61.5
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.1e-53 213.0 169 62.1
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 4.6e-53 211.8 132 77.3
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.3e-52 209.5 140 73.6
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 2.3e-52 209.5 164 64.0
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 2.8e-50 202.6 169 58.0
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 6.2e-50 201.4 143 72.0
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.4e-41 172.9 196 52.6
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 1.5e-40 170.2 187 49.7
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.0e-39 167.5 126 67.5
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 2.9e-39 166.0 165 57.0
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.4e-38 163.7 151 52.3
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.2e-38 162.2 178 52.8
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 9.7e-35 151.0 199 43.7
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.4e-30 137.1 83 74.7
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 3.2e-30 136.0 108 65.7
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 2.5e-27 126.3 178 41.0
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.2e-24 117.5 79 68.4
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.2e-24 117.5 128 49.2
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-23 113.6 175 42.9
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 7.2e-22 108.2 157 36.3
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.7e-21 106.3 81 67.9
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 3.3e-19 99.4 97 54.6
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 4.8e-18 95.5 147 39.5
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 2.5e-14 83.2 61 62.3
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 9.1e-09 64.7 40 75.0
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.2e-07 60.1 86 39.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 2.5e-06 56.6 36 69.4


User provided reference genes

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