Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 4.0e-113 411.4 199 100.0
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 4.2e-102 374.8 201 90.0
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 3.9e-100 368.2 202 89.6
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 2.2e-95 352.4 203 85.7
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.3e-92 343.2 204 82.4
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 1.7e-92 342.8 205 82.9
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.7e-92 342.8 204 84.3
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 3.9e-92 341.7 201 83.6
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 5.1e-92 341.3 203 84.7
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 6.6e-92 340.9 204 83.3
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.1e-91 340.1 200 85.0
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.1e-91 340.1 201 84.1
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 1.5e-91 339.7 201 82.6
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.6e-90 336.3 201 84.1
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.1e-90 335.9 200 82.5
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 3.6e-90 335.1 202 82.2
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 6.2e-90 334.3 201 83.1
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 6.2e-90 334.3 209 79.9
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.1e-89 333.6 201 82.6
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.1e-89 333.6 200 84.0
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 6.9e-89 330.9 201 82.1
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 2.0e-88 329.3 205 80.0
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 2.0e-88 329.3 180 86.7
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 3.4e-88 328.6 212 79.2
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 7.6e-88 327.4 205 80.5
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 2.9e-87 325.5 203 78.3
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 6.4e-87 324.3 190 81.6
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 1.4e-86 323.2 201 78.6
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.4e-86 323.2 199 79.9
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.9e-86 322.8 199 80.4
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 2.4e-86 322.4 203 79.8
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 5.5e-86 321.2 202 78.7
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 5.5e-86 321.2 202 78.7
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 2.1e-85 319.3 199 79.9
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 4.6e-85 318.2 212 75.0
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.0e-84 317.0 229 72.5
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 5.1e-84 314.7 191 81.7
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 6.7e-84 314.3 200 78.5
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 8.7e-84 313.9 194 78.4
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 8.7e-84 313.9 196 78.6
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 8.7e-84 313.9 201 77.6
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.1e-83 313.5 194 78.9
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 1.1e-83 313.5 193 79.8
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.1e-83 313.5 201 76.6
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.9e-83 312.8 166 85.5
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.9e-83 312.8 198 78.8
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 3.3e-83 312.0 166 86.1
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 3.3e-83 312.0 166 86.1
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 3.3e-83 312.0 166 86.1
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 3.3e-83 312.0 166 86.1
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 3.3e-83 312.0 166 86.1
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 3.3e-83 312.0 200 76.5
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 4.3e-83 311.6 198 79.3
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 5.6e-83 311.2 198 75.8
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 7.4e-83 310.8 202 75.7
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 9.6e-83 310.5 167 85.0
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 9.6e-83 310.5 205 74.1
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 2.1e-82 309.3 204 73.0
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 4.8e-82 308.1 208 75.0
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 6.2e-82 307.8 198 76.3
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 6.2e-82 307.8 171 82.5
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 1.1e-81 307.0 194 76.8
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.1e-81 307.0 199 76.9
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.1e-81 307.0 202 76.7
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 1.4e-81 306.6 189 79.9
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.4e-81 305.8 189 79.4
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 2.4e-81 305.8 204 75.5
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 6.9e-81 304.3 170 81.8
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.2e-80 303.5 198 75.3
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.5e-80 303.1 204 75.0
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.5e-80 303.1 171 81.9
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 3.4e-80 302.0 198 74.7
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 7.6e-80 300.8 198 74.7
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 1.7e-79 299.7 204 74.5
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 4.9e-79 298.1 223 68.6
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 4.9e-79 298.1 181 79.0
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.2e-77 293.5 169 80.5
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.8e-76 289.7 169 81.1
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 3.0e-76 288.9 153 87.6
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.8e-73 279.6 194 71.6
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 2.0e-72 276.2 182 75.3
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.0e-71 273.9 164 79.9
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.7e-71 273.1 180 77.8
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 5.0e-71 271.6 173 80.9
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 6.5e-71 271.2 183 73.2
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.2e-70 268.9 178 78.7
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 3.2e-70 268.9 182 74.7
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.9e-67 259.6 137 86.1
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.5e-67 259.2 141 84.4
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 4.3e-67 258.5 175 74.9
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 2.4e-65 252.7 203 65.0
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.5e-64 250.0 163 71.8
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.8e-63 245.4 137 81.8
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 6.7e-60 234.6 163 66.9
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 3.1e-57 225.7 111 94.6
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 4.1e-57 225.3 161 70.8
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 5.3e-57 224.9 166 62.7
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 2.0e-56 223.0 152 70.4
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.2e-48 197.2 170 57.1
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 2.6e-48 196.1 174 60.9
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 7.5e-27 124.8 140 42.9
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 3.2e-17 92.8 165 37.6
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 5.8e-11 72.0 133 37.6
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 8.3e-10 68.2 37 81.1
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 5.6e-06 55.5 137 31.4


User provided reference genes

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