Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 1.1e-75 286.6 146 100.0
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.2e-18 97.1 116 46.6
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.8e-15 85.9 105 45.7
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.4e-14 83.6 148 40.5
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 4.1e-14 82.0 123 39.8
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 5.3e-14 81.6 44 77.3
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 7.0e-14 81.3 44 77.3
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 9.1e-14 80.9 39 82.1
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 2.0e-13 79.7 45 75.6
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.5e-13 79.0 37 83.8
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 4.5e-13 78.6 88 56.8
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 5.9e-13 78.2 44 75.0
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 7.7e-13 77.8 98 43.9
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 7.7e-13 77.8 67 47.8
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 1.0e-12 77.4 68 55.9
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.3e-12 77.0 39 79.5
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.3e-12 77.0 45 75.6
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.3e-12 77.0 70 54.3
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.3e-12 77.0 40 75.0
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.7e-12 76.6 40 72.5
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 2.2e-12 76.3 30 100.0
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 2.2e-12 76.3 92 56.5
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 2.2e-12 76.3 101 40.6
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.9e-12 75.9 42 76.2
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 2.9e-12 75.9 39 74.4
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.9e-12 75.9 41 73.2
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.9e-12 75.9 41 73.2
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.9e-12 75.9 41 73.2
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 3.8e-12 75.5 38 78.9
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 5.0e-12 75.1 76 50.0
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 5.0e-12 75.1 37 78.4
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 5.0e-12 75.1 44 70.5
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 6.5e-12 74.7 43 72.1
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 6.5e-12 74.7 41 70.7
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 6.5e-12 74.7 36 80.6
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.1e-11 73.9 42 73.8
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.1e-11 73.9 43 72.1
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.5e-11 73.6 39 71.8
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.5e-11 73.6 38 76.3
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.5e-11 73.6 41 70.7
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.9e-11 73.2 72 47.2
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.9e-11 73.2 35 82.9
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.9e-11 73.2 132 33.3
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.9e-11 73.2 132 33.3
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.9e-11 73.2 35 82.9
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.9e-11 73.2 69 50.7
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 2.5e-11 72.8 63 55.6
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 2.5e-11 72.8 76 46.1
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 3.2e-11 72.4 73 46.6
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 3.2e-11 72.4 86 43.0
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 4.2e-11 72.0 36 77.8
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 5.5e-11 71.6 70 51.4
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 5.5e-11 71.6 34 82.4
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 5.5e-11 71.6 135 41.5
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 7.2e-11 71.2 37 75.7
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 9.4e-11 70.9 89 38.2
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 9.4e-11 70.9 37 78.4
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 9.4e-11 70.9 36 75.0
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.2e-10 70.5 131 35.9
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.2e-10 70.5 38 68.4
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.2e-10 70.5 39 69.2
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.6e-10 70.1 85 49.4
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 2.1e-10 69.7 41 70.7
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 2.1e-10 69.7 36 80.6
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 2.1e-10 69.7 36 80.6
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 2.1e-10 69.7 36 80.6
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 2.1e-10 69.7 45 64.4
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 2.7e-10 69.3 43 65.1
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 2.7e-10 69.3 36 77.8
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 3.6e-10 68.9 65 47.7
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 3.6e-10 68.9 42 69.0
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 3.6e-10 68.9 37 70.3
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 3.6e-10 68.9 39 71.8
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 4.7e-10 68.6 103 54.4
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 4.7e-10 68.6 39 71.8
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 4.7e-10 68.6 63 60.3
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 4.7e-10 68.6 36 75.0
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.7e-10 68.6 35 74.3
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.7e-10 68.6 35 74.3
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 4.7e-10 68.6 35 74.3
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 6.1e-10 68.2 37 75.7
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 8.0e-10 67.8 63 55.6
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.0e-09 67.4 42 64.3
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.4e-09 67.0 39 66.7
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.4e-09 67.0 30 83.3
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.8e-09 66.6 34 73.5
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.8e-09 66.6 41 65.9
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.3e-09 66.2 43 67.4
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 3.0e-09 65.9 97 38.1
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.0e-09 65.9 40 65.0
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 3.0e-09 65.9 29 82.8
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 6.7e-09 64.7 133 36.8
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 8.8e-09 64.3 116 34.5
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 8.8e-09 64.3 29 82.8
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 8.8e-09 64.3 29 82.8
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 8.8e-09 64.3 29 82.8
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 2.0e-08 63.2 32 71.9
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 3.3e-08 62.4 34 73.5
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 3.3e-08 62.4 38 57.9
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 5.7e-08 61.6 29 75.9
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 9.7e-08 60.8 38 60.5
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 1.3e-07 60.5 29 72.4
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 2.8e-07 59.3 29 75.9
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 4.8e-07 58.5 99 39.4
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 5.3e-06 55.1 35 60.0


User provided reference genes

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