Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.8e-120 436.0 234 100.0
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 9.6e-74 280.8 234 64.5
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 5.3e-72 275.0 233 61.4
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.9e-70 269.2 233 61.4
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 2.3e-67 259.6 233 60.9
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.5e-66 256.9 233 63.1
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.1e-64 250.8 234 61.5
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.8e-64 250.0 240 62.9
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 4.0e-64 248.8 233 58.4
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 6.9e-64 248.1 233 61.8
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.2e-63 247.3 232 62.1
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.2e-63 247.3 234 61.1
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 4.5e-63 245.4 233 61.4
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 6.5e-62 241.5 238 55.9
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.1e-61 240.7 238 55.5
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 4.2e-61 238.8 238 55.0
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.6e-60 236.9 238 52.9
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 7.9e-60 234.6 238 55.0
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 7.9e-60 234.6 234 60.3
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.5e-58 229.6 239 60.7
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 3.3e-58 229.2 238 53.8
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 2.4e-56 223.0 206 55.8
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 1.0e-54 217.6 237 53.6
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.2e-52 210.7 221 54.3
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.2e-52 210.7 221 54.3
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.1e-50 204.1 123 75.6
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.9e-50 203.4 154 68.2
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 5.7e-50 201.8 174 62.6
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 9.7e-50 201.1 234 53.0
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 6.9e-48 194.9 239 49.8
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 2.0e-47 193.4 142 69.0
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 2.9e-46 189.5 237 47.7
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 8.5e-46 188.0 235 47.2
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.4e-45 187.2 174 56.3
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 3.2e-45 186.0 242 49.2
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 4.8e-41 172.2 312 40.4
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 5.5e-37 158.7 237 43.9
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 4.7e-36 155.6 174 50.6
Haze_16205 Corylus avellana HOM05D005772 ORTHO05D006468 5.2e-35 152.1 185 53.0
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.1e-32 144.4 216 39.8
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 3.1e-32 142.9 229 35.4
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.5e-31 139.4 272 37.9
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 2.9e-30 136.3 208 41.3
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 2.5e-29 133.3 206 37.4
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 5.5e-29 132.1 208 38.9
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.6e-28 130.6 179 43.6
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 2.1e-28 130.2 130 49.2
Dinv20324 Davidia involucrata HOM05D005772 ORTHO05D006468 3.6e-28 129.4 235 46.8
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 6.1e-28 128.6 208 38.9
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 6.1e-28 128.6 208 38.9
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 3.0e-27 126.3 206 39.3
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 6.7e-27 125.2 220 37.7
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 8.8e-27 124.8 224 37.9
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 1.2e-26 124.4 172 44.2
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.2e-26 124.4 176 44.3
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.7e-25 120.6 172 43.6
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.2e-25 120.2 178 41.0
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 4.8e-25 119.0 149 46.3
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 1.4e-24 117.5 178 41.6
QL06p047014 Quercus lobata HOM05D001071 ORTHO05D006468 1.8e-24 117.1 133 54.9
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 4.1e-24 115.9 154 46.1
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 4.1e-24 115.9 135 51.9
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 5.3e-24 115.5 191 39.3
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.2e-23 114.4 185 41.1
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.2e-23 114.4 164 42.1
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.6e-23 114.0 191 39.3
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 2.0e-23 113.6 197 37.6
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 2.7e-23 113.2 232 35.8
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 3.5e-23 112.8 183 39.9
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 3.5e-23 112.8 183 42.1
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 4.5e-23 112.5 181 40.3
Duzib192G0394 Durio zibethinus HOM05D005772 ORTHO05D006468 5.9e-23 112.1 134 49.3
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 5.9e-23 112.1 176 38.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 7.7e-23 111.7 179 40.8
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 7.7e-23 111.7 183 39.9
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 7.7e-23 111.7 175 42.3
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.0e-22 111.3 176 38.1
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.9e-22 109.8 182 39.0
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 2.9e-22 109.8 180 41.7
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 2.9e-22 109.8 183 38.8
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.8e-22 109.4 174 39.7
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 5.0e-22 109.0 172 39.5
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 6.5e-22 108.6 179 39.1
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 6.5e-22 108.6 176 37.5
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.1e-21 107.8 175 40.6
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.5e-21 106.7 181 39.2
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.2e-21 106.3 106 48.1
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 3.2e-21 106.3 185 37.8
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 4.2e-21 105.9 183 38.3
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 5.5e-21 105.5 173 42.8
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 5.5e-21 105.5 239 36.4
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 5.5e-21 105.5 178 38.8
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 3.6e-20 102.8 182 37.9
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.3e-19 100.1 181 38.1
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 3.0e-19 99.8 117 46.2
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 5.2e-19 99.0 173 45.1
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 1.5e-18 97.4 138 39.9
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 2.6e-18 96.7 184 35.3
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 5.7e-18 95.5 148 39.9
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 7.5e-18 95.1 195 36.4
MD04G1024400 Malus domestica HOM05D005772 ORTHO05D006468 2.2e-17 93.6 86 52.3
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 2.8e-17 93.2 187 35.8
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.8e-17 93.2 179 35.8
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 1.1e-16 91.3 157 33.8
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 1.4e-16 90.9 136 42.6
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 1.4e-16 90.9 118 40.7
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.4e-16 90.9 238 30.3
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 2.0e-15 87.0 179 37.4
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.7e-14 84.0 214 32.7
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.7e-14 84.0 118 35.6
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 3.8e-14 82.8 154 37.0
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 8.6e-14 81.6 175 33.7
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.5e-13 80.9 157 34.4
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 1.9e-13 80.5 175 30.9
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 1.9e-13 80.5 183 30.1
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.2e-13 79.7 172 30.2
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 3.2e-13 79.7 181 34.3
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 3.6e-12 76.3 173 30.1
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 8.8e-11 71.6 82 45.1
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 2.6e-10 70.1 100 38.0
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 2.6e-10 70.1 139 34.5
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 3.4e-10 69.7 234 25.6
ATR0618G111 Amborella trichopoda HOM05D005772 ORTHO05D006468 4.4e-10 69.3 93 46.2
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 5.7e-10 68.9 157 28.7
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 7.5e-10 68.6 79 46.8
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 6.3e-09 65.5 121 39.7
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.1e-08 64.7 121 43.8
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 4.5e-07 59.3 138 27.5
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 7.8e-07 58.5 106 38.7
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.3e-06 57.8 87 40.2
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 3.8e-06 56.2 132 34.8
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 8.6e-06 55.1 198 25.3


User provided reference genes

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