Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.9e-223 778.5 782 100.0
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.0e-111 408.7 780 67.3
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 6.0e-104 382.9 780 63.5
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 6.6e-103 379.4 779 51.7
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 3.5e-96 357.1 781 59.7
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.3e-95 355.1 782 67.4
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.3e-95 355.1 488 80.5
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 1.5e-94 351.7 780 53.1
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 8.1e-93 345.9 780 57.3
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 3.4e-91 340.5 780 55.0
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 7.6e-91 339.3 780 55.9
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 2.9e-90 337.4 740 63.5
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 3.8e-90 337.0 779 51.9
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.1e-89 335.5 780 66.0
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-89 335.1 780 55.0
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.9e-89 334.7 780 58.1
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 4.2e-89 333.6 760 62.6
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 9.3e-89 332.4 780 57.4
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-88 332.0 779 52.5
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 2.3e-87 327.8 781 52.8
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.4e-86 322.8 779 48.1
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 1.0e-82 312.4 746 58.4
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.7e-82 311.6 782 59.1
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.7e-82 311.6 783 51.9
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 6.5e-82 309.7 779 50.1
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.9e-81 308.1 780 61.5
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 6.7e-79 299.7 778 52.4
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 8.7e-79 299.3 780 56.4
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.9e-78 298.1 796 45.2
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 4.3e-78 297.0 780 52.3
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 7.4e-78 296.2 691 65.0
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 2.8e-77 294.3 742 57.0
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 2.4e-76 291.2 781 54.4
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 2.2e-74 284.6 779 56.6
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 2.5e-73 281.2 781 59.7
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.2e-72 278.9 781 61.8
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.7e-72 277.7 779 60.2
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 3.5e-72 277.3 779 63.3
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 7.9e-72 276.2 763 55.8
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 8.7e-71 272.7 780 62.7
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.9e-70 271.6 691 63.2
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 2.5e-70 271.2 749 47.8
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 1.4e-68 265.4 749 47.3
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 2.0e-67 261.5 759 53.6
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 1.3e-66 258.8 776 56.2
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 8.5e-66 256.1 782 48.1
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 6.1e-64 250.0 758 57.9
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 3.0e-63 247.7 783 52.7
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.2e-61 241.5 756 58.3
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.3e-61 240.0 774 54.0
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 5.3e-60 236.9 760 57.8
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 4.5e-59 233.8 779 46.1
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 7.7e-59 233.0 745 50.2
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 5.5e-57 226.9 780 49.7
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 5.5e-57 226.9 781 46.2
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 9.4e-57 226.1 795 48.9
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.6e-56 225.3 761 49.7
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 6.1e-56 223.4 152 79.6
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.8e-55 221.9 790 53.0
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 1.8e-55 221.9 760 54.7
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 3.9e-55 220.7 774 48.8
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 2.0e-54 218.4 730 61.4
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 5.7e-54 216.9 778 46.5
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.7e-53 215.3 785 57.1
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 2.2e-53 214.9 780 53.1
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.8e-53 214.5 776 53.5
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.8e-53 214.5 780 50.4
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 3.7e-53 214.2 735 61.1
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.4e-52 211.5 761 52.3
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 5.3e-52 210.3 500 59.2
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.6e-51 208.0 788 55.7
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 5.9e-51 206.8 756 51.5
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 2.9e-50 204.5 762 60.1
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 6.5e-50 203.4 736 43.8
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.2e-48 199.1 738 49.7
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.2e-48 199.1 790 51.4
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.6e-48 198.7 790 48.1
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 6.1e-48 196.8 789 54.0
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 6.7e-47 193.4 248 48.8
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 3.3e-46 191.0 778 49.4
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 3.3e-46 191.0 783 55.3
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 7.5e-46 189.9 248 48.0
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 1.7e-45 188.7 248 48.0
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 1.7e-45 188.7 248 48.0
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 6.3e-45 186.8 789 54.2
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.0e-42 179.5 245 45.7
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.7e-42 178.7 782 45.4
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 3.8e-42 177.6 241 46.5
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 7.2e-41 173.3 748 46.5
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.2e-38 166.0 798 47.6
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 5.4e-36 157.1 740 47.0
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 7.0e-36 156.8 237 43.0
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 8.5e-34 149.8 196 48.5
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.5e-33 149.1 782 48.8
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 1.9e-33 148.7 235 45.1
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 4.2e-33 147.5 789 49.9
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 1.2e-32 146.0 783 42.5
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 5.2e-31 140.6 269 38.3
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 7.5e-30 136.7 779 44.8
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 3.1e-28 131.3 263 36.9
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.0e-27 128.6 143 54.5
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.0e-26 126.3 248 37.9
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.0e-23 116.3 787 45.0
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-20 105.9 101 61.4
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 9.2e-20 103.2 237 33.8
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.3e-17 94.4 150 46.0
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.8e-15 89.0 141 45.4
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 9.8e-14 83.2 104 43.3
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 6.4e-13 80.5 734 43.3
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 2.7e-11 75.1 124 40.3
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 7.8e-11 73.6 164 37.8
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 3.9e-10 71.2 74 58.1
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 3.3e-09 68.2 62 58.1
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.3e-09 67.0 138 38.4
Mapoly0009s0162 Marchantia polymorpha HOM05D006421 ORTHO05D008268 5.8e-06 57.4 260 28.5


User provided reference genes

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