Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 3.4e-130 468.4 246 100.0
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 1.9e-64 250.0 214 66.8
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 2.6e-61 239.6 210 65.7
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 9.2e-59 231.1 204 64.2
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 1.0e-57 227.6 216 63.0
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 1.3e-57 227.3 222 60.4
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 1.7e-57 226.9 212 61.8
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 1.7e-57 226.9 223 61.9
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 2.5e-56 223.0 206 62.6
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 4.3e-56 222.2 199 64.3
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 9.5e-56 221.1 226 60.2
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.6e-55 220.3 212 59.9
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.6e-55 220.3 212 59.9
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 2.1e-55 219.9 217 60.4
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 2.1e-55 219.9 211 58.3
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 1.0e-54 217.6 212 61.8
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.4e-54 217.2 218 59.6
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 5.2e-54 215.3 205 62.9
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 5.2e-54 215.3 205 60.5
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 8.9e-54 214.5 207 62.8
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 3.4e-53 212.6 213 58.2
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 4.4e-53 212.2 209 60.8
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 4.4e-53 212.2 206 61.2
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 5.8e-53 211.8 220 56.4
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 5.8e-53 211.8 230 55.7
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 4.9e-52 208.8 225 56.4
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 6.4e-52 208.4 206 55.3
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 8.3e-52 208.0 209 60.3
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 8.3e-52 208.0 207 57.5
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 8.3e-52 208.0 206 60.2
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.4e-51 207.2 205 60.5
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 1.9e-51 206.8 208 57.7
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 5.4e-51 205.3 200 58.5
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 2.0e-50 203.4 217 55.3
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 3.5e-50 202.6 210 57.6
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 4.6e-50 202.2 210 55.7
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 6.0e-50 201.8 208 56.7
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 1.0e-49 201.1 150 73.3
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 1.3e-49 200.7 209 59.3
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 2.3e-49 199.9 155 69.7
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 2.3e-49 199.9 216 56.9
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 5.0e-49 198.7 208 54.3
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 5.0e-49 198.7 224 56.7
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 5.0e-49 198.7 210 56.2
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 5.0e-49 198.7 230 54.3
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 1.9e-48 196.8 203 57.6
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 1.9e-48 196.8 199 58.3
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 2.5e-48 196.4 213 58.2
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 2.5e-48 196.4 210 54.8
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 4.3e-48 195.7 210 57.1
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 9.5e-48 194.5 215 52.1
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 1.2e-47 194.1 219 54.3
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 2.8e-47 193.0 225 54.7
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 6.2e-47 191.8 213 52.6
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 2.3e-46 189.9 212 52.4
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 3.1e-46 189.5 215 50.7
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 4.0e-46 189.1 208 57.2
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 4.0e-46 189.1 206 53.4
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.0e-45 186.8 204 55.9
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 2.0e-45 186.8 204 57.8
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 2.0e-45 186.8 306 43.8
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 2.6e-45 186.4 215 51.2
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 4.4e-45 185.7 205 56.1
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 1.3e-44 184.1 205 55.1
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 1.7e-44 183.7 209 51.2
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 4.9e-44 182.2 201 52.2
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 6.4e-44 181.8 199 55.3
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 8.3e-44 181.4 211 55.0
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 1.4e-43 180.6 188 56.4
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 1.4e-43 180.6 209 53.6
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 5.4e-43 178.7 204 56.4
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 2.7e-42 176.4 153 65.4
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 3.5e-42 176.0 253 46.2
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 1.0e-41 174.5 200 50.5
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 1.0e-41 174.5 196 57.7
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 1.9e-40 170.2 197 51.8
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 8.9e-38 161.4 194 46.4
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 2.6e-37 159.8 115 71.3
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 6.4e-36 155.2 178 51.1
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 7.1e-35 151.8 203 44.3
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 4.6e-34 149.1 202 46.5
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 7.8e-34 148.3 203 42.9
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 3.0e-33 146.4 206 41.3
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 8.1e-31 138.3 204 41.2
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 1.1e-30 137.9 204 40.2
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 5.2e-30 135.6 204 41.2
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 5.8e-29 132.1 193 39.4
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 2.9e-28 129.8 193 39.9
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 2.9e-28 129.8 215 38.6
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 4.9e-28 129.0 93 74.2
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 9.3e-27 124.8 160 42.5
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 9.3e-27 124.8 160 42.5
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 2.3e-25 120.2 153 52.9
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 8.1e-23 111.7 195 44.1
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 1.4e-22 110.9 173 43.9
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 1.2e-18 97.8 190 42.1
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 3.5e-18 96.3 184 42.9
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 9.6e-16 88.2 210 37.1
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.6e-13 80.1 128 43.0
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 5.8e-13 79.0 169 34.3
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 7.6e-13 78.6 137 44.5
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 3.8e-12 76.3 228 32.5
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 1.4e-11 74.3 99 38.4
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 3.2e-11 73.2 53 64.2
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 2.7e-10 70.1 168 31.0
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 1.8e-06 57.4 134 31.3


User provided reference genes

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