Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 0.0e+00 1147.5 551 100.0
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 3.0e-211 738.8 537 68.7
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 3.2e-192 675.6 466 71.9
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 1.3e-166 590.5 463 61.3
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 2.1e-164 583.2 434 65.2
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 7.4e-133 478.4 406 60.3
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 2.0e-130 470.3 284 78.9
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 2.9e-129 466.5 294 75.5
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 3.2e-128 463.0 304 72.4
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 6.7e-126 455.3 292 74.0
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.9e-125 453.8 321 68.5
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.4e-123 447.6 314 68.5
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 1.8e-123 447.2 295 72.2
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 6.9e-123 445.3 320 66.2
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 5.9e-122 442.2 292 72.3
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 2.2e-121 440.3 317 65.6
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 3.8e-121 439.5 283 72.1
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 1.1e-120 438.0 291 71.5
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 9.4e-120 434.9 478 49.0
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 7.9e-119 431.8 286 72.0
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 5.1e-118 429.1 317 66.9
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 6.7e-118 428.7 298 68.8
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 4.4e-117 426.0 321 65.7
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 3.1e-115 419.9 281 72.2
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 3.8e-113 412.9 286 69.9
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 2.5e-112 410.2 278 70.9
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 4.2e-112 409.5 252 75.8
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 5.5e-112 409.1 284 69.7
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 1.8e-110 404.1 295 67.5
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 3.9e-110 402.9 286 68.2
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 3.9e-110 402.9 279 70.6
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 7.4e-109 398.7 363 59.0
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 1.3e-108 397.9 439 48.1
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.8e-107 394.0 283 67.5
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 1.8e-107 394.0 251 71.7
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 6.5e-105 385.6 305 64.6
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 8.5e-105 385.2 258 73.6
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 2.7e-103 380.2 295 62.4
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 1.9e-96 357.5 207 80.2
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 9.8e-93 345.1 228 70.6
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 6.3e-92 342.4 296 61.1
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 7.7e-90 335.5 280 61.1
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 1.3e-89 334.7 266 63.9
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 1.4e-83 314.7 254 63.0
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 1.7e-76 291.2 220 66.4
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 8.3e-76 288.9 198 71.7
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 1.7e-73 281.2 229 57.2
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 2.6e-69 267.3 229 61.6
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.5e-64 251.5 240 49.6
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 3.1e-54 217.2 164 64.6
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 6.0e-50 203.0 145 71.7
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.9e-48 198.0 116 77.6
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 3.3e-48 197.2 245 45.3
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.2e-47 195.3 133 66.9
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 2.0e-37 161.4 119 62.2
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 1.8e-33 148.3 90 75.6
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 1.8e-33 148.3 81 80.2
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 1.1e-32 145.6 96 70.8
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 1.3e-25 122.1 70 75.7
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 3.9e-25 120.6 83 67.5
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 4.3e-24 117.1 104 57.7
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 9.6e-24 115.9 249 33.7
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 1.3e-23 115.5 69 76.8
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 4.0e-22 110.5 116 46.6
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 5.5e-19 100.1 51 82.4
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 3.3e-16 90.9 61 68.9
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 1.1e-06 59.3 39 71.8


User provided reference genes

Program Settings