Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.2e-109 400.2 269 100.0
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 7.3e-17 92.0 171 36.8
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.8e-15 87.4 110 45.5
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 5.2e-15 85.9 190 35.3
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 6.8e-15 85.5 171 33.9
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.4e-14 83.2 185 30.8
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 3.4e-14 83.2 145 37.9
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 7.5e-14 82.0 188 31.9
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 7.5e-14 82.0 158 36.1
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 9.8e-14 81.6 171 33.3
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 1.3e-13 81.3 180 32.8
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 2.2e-13 80.5 127 37.8
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 2.2e-13 80.5 180 33.3
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.9e-13 80.1 184 33.7
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 3.7e-13 79.7 189 34.4
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 1.1e-12 78.2 203 31.5
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 1.9e-12 77.4 140 34.3
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 2.4e-12 77.0 122 42.6
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 3.2e-12 76.6 149 37.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 3.2e-12 76.6 168 29.8
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 3.2e-12 76.6 140 32.1
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 3.2e-12 76.6 128 36.7
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 7.0e-12 75.5 159 32.7
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.2e-11 74.7 148 35.1
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 1.6e-11 74.3 152 36.2
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 2.0e-11 73.9 113 38.9
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 2.7e-11 73.6 153 34.0
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.5e-11 73.2 189 31.7
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 3.5e-11 73.2 105 39.0
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 3.5e-11 73.2 173 32.4
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 4.6e-11 72.8 144 31.9
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 6.0e-11 72.4 153 30.7
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 7.8e-11 72.0 164 32.9
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 1.0e-10 71.6 191 30.4
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.3e-10 71.2 139 36.0
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 1.3e-10 71.2 107 34.6
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 1.7e-10 70.9 176 33.5
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.3e-10 70.5 190 27.4
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 2.3e-10 70.5 154 33.1
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 3.9e-10 69.7 121 36.4
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 3.9e-10 69.7 102 39.2
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 3.9e-10 69.7 144 32.6
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.6e-10 68.9 139 33.8
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 8.6e-10 68.6 106 38.7
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 8.6e-10 68.6 178 32.0
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.1e-09 68.2 113 34.5
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.1e-09 68.2 151 35.8
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 1.5e-09 67.8 159 32.7
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.9e-09 67.4 141 32.6
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 1.9e-09 67.4 193 29.0
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.5e-09 67.0 120 35.8
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 2.5e-09 67.0 178 30.9
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.3e-09 66.6 127 36.2
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 3.3e-09 66.6 147 34.7
Dinv08871 Davidia involucrata HOM05D007989 ORTHO05D010087 4.3e-09 66.2 71 45.1
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 4.3e-09 66.2 146 32.9
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 5.6e-09 65.9 108 36.1
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 7.3e-09 65.5 144 34.7
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 7.3e-09 65.5 136 28.7
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 7.3e-09 65.5 108 38.0
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 9.5e-09 65.1 130 35.4
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.2e-08 64.7 130 31.5
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.6e-08 64.3 130 35.4
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 1.6e-08 64.3 188 31.4
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.8e-08 63.5 128 32.8
ATR0684G111 Amborella trichopoda HOM05D007310 ORTHO05D002375 3.6e-08 63.2 53 52.8
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.6e-08 63.2 125 36.0
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.6e-08 63.2 112 34.8
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 3.6e-08 63.2 145 32.4
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 4.7e-08 62.8 152 29.6
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 4.7e-08 62.8 143 31.5
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 4.7e-08 62.8 149 33.6
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 4.7e-08 62.8 107 33.6
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 6.2e-08 62.4 107 37.4
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 8.1e-08 62.0 156 30.8
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 8.1e-08 62.0 133 32.3
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 1.1e-07 61.6 159 27.0
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 1.1e-07 61.6 100 35.0
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 1.4e-07 61.2 147 31.3
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 1.4e-07 61.2 156 30.8
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 1.8e-07 60.8 192 27.1
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.8e-07 60.8 157 33.1
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.8e-07 60.8 119 33.6
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 1.8e-07 60.8 111 35.1
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 2.3e-07 60.5 139 30.9
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 2.3e-07 60.5 105 35.2
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 2.3e-07 60.5 172 30.8
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 3.1e-07 60.1 110 33.6
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.1e-07 60.1 150 27.3
Os10g0377000 Oryza sativa ssp. japonica HOM05D007310 ORTHO05D002375 3.1e-07 60.1 123 34.1
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 4.0e-07 59.7 148 34.5
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 4.0e-07 59.7 125 35.2
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.0e-07 59.7 125 35.2
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 6.8e-07 58.9 163 27.6
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 6.8e-07 58.9 144 28.5
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-06 58.2 157 28.0
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-06 58.2 157 28.0
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 1.2e-06 58.2 151 28.5
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 1.2e-06 58.2 187 31.6
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 2.0e-06 57.4 132 32.6
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 2.0e-06 57.4 132 29.5
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 2.0e-06 57.4 173 29.5
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 2.0e-06 57.4 139 33.1
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 2.0e-06 57.4 204 28.4
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.0e-06 57.4 125 36.0
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 2.6e-06 57.0 200 27.0
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.6e-06 57.0 187 28.9
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 2.6e-06 57.0 98 35.7
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 3.4e-06 56.6 172 30.2
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 5.8e-06 55.8 151 30.5
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 5.8e-06 55.8 151 30.5
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 5.8e-06 55.8 149 30.9
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 7.5e-06 55.5 125 32.8
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 7.5e-06 55.5 150 30.0


User provided reference genes

Program Settings