Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0988 Trochodendron aralioides HOM05D004095 ORTHO05D003197 5.6e-118 427.9 270 100.0
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.7e-45 186.0 191 55.0
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 4.0e-39 166.0 278 47.1
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.9e-33 147.1 216 43.1
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 9.5e-25 118.2 215 38.6
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 4.7e-24 115.9 214 38.8
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.4e-20 104.4 221 32.6
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 1.3e-18 97.8 191 36.1
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 1.9e-17 94.0 214 35.0
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 7.3e-17 92.0 285 35.4
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 3.6e-16 89.7 215 32.6
Cfa005239 Carpinus fangiana HOM05D004095 ORTHO05D003197 8.1e-16 88.6 182 34.1
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.8e-15 87.4 205 32.7
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.2e-14 84.7 199 31.7
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 1.5e-14 84.3 199 32.7
Haze_02143 Corylus avellana HOM05D015147 ORTHO05D003197 3.4e-14 83.2 196 33.7
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 3.4e-14 83.2 240 30.8
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.2e-13 80.5 210 32.9
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 2.9e-13 80.1 200 33.0
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 2.9e-13 80.1 195 33.8
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 4.9e-13 79.3 150 40.7
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.9e-12 77.4 205 31.7
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.4e-12 77.0 205 31.7
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 5.4e-12 75.9 258 33.3
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 7.1e-12 75.5 198 29.8
Duzib052G0919 Durio zibethinus HOM05D015147 ORTHO05D003197 9.2e-12 75.1 185 34.1
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 1.6e-11 74.3 216 30.1
FvH4_2g38160 Fragaria vesca HOM05D004095 ORTHO05D003197 2.1e-11 73.9 177 34.5
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 2.7e-11 73.6 199 28.1
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 2.7e-11 73.6 201 30.8
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 2.7e-11 73.6 212 32.1
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 3.5e-11 73.2 214 28.5
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 3.5e-11 73.2 217 30.9
Ciclev10025767m.g Citrus clementina HOM05D004095 ORTHO05D003197 4.6e-11 72.8 364 34.6
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 6.0e-11 72.4 176 30.7
QL11p050200 Quercus lobata HOM05D004095 ORTHO05D003197 7.8e-11 72.0 209 30.1
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 1.3e-10 71.2 190 30.5
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 2.3e-10 70.5 254 35.0
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 3.0e-10 70.1 198 31.8
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 3.9e-10 69.7 177 33.3
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 3.9e-10 69.7 208 30.3
FAN27G1813 Fragaria x ananassa HOM05D004095 ORTHO05D003197 5.1e-10 69.3 171 33.9
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 8.6e-10 68.6 213 30.5
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 1.1e-09 68.2 217 29.5
FAN20G0678 Fragaria x ananassa HOM05D004095 ORTHO05D003197 1.5e-09 67.8 177 34.5
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 1.9e-09 67.4 216 28.2
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 1.9e-09 67.4 204 30.9
Thecc.02G059700 Theobroma cacao HOM05D015147 ORTHO05D003197 1.9e-09 67.4 91 40.7
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 4.3e-09 66.2 203 29.1
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 4.3e-09 66.2 213 28.2
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.3e-09 65.5 217 30.4
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 7.3e-09 65.5 170 32.4
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 7.3e-09 65.5 184 33.2
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 7.3e-09 65.5 244 27.9
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 1.2e-08 64.7 206 28.6
RcHm_v2.0_Chr6g0303321 Rosa chinensis HOM05D004095 ORTHO05D003197 1.6e-08 64.3 171 33.3
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 2.1e-08 63.9 214 29.4
Thecc.02G060400 Theobroma cacao HOM05D015147 ORTHO05D003197 2.1e-08 63.9 63 52.4
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.6e-08 63.2 217 30.0
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 8.1e-08 62.0 220 30.0
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 8.1e-08 62.0 82 42.7
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 1.1e-07 61.6 82 47.6
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 1.1e-07 61.6 209 27.8
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 1.8e-07 60.8 203 27.1
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.1e-07 60.1 191 31.4
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.1e-07 60.1 199 29.6
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 3.1e-07 60.1 198 31.3
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 1.2e-06 58.2 192 30.2
COL.COLO4_17333 Corchorus olitorius HOM05D015147 ORTHO05D003197 1.2e-06 58.2 161 31.7
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 2.6e-06 57.0 211 27.0
Prupe.8G165300 Prunus persica HOM05D029580 ORTHO05D028671 2.6e-06 57.0 95 36.8
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 3.4e-06 56.6 118 38.1
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.4e-06 56.6 217 29.5
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 4.4e-06 56.2 157 31.8
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 5.8e-06 55.8 210 28.6
Cpa.g.sc37.138 Carica papaya HOM05D015147 ORTHO05D003197 7.6e-06 55.5 160 31.2
CiPaw.06G122100 Carya illinoinensis HOM05D029580 ORTHO05D028671 7.6e-06 55.5 186 28.5


User provided reference genes

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