Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 8.7e-69 263.5 129 100.0
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 6.3e-67 257.3 128 98.4
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.4e-50 202.2 99 98.0
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 2.7e-41 172.2 129 67.4
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 5.9e-41 171.0 129 64.3
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 1.7e-40 169.5 130 66.9
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 8.5e-40 167.2 133 64.7
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 2.7e-38 162.2 130 62.3
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 3.6e-38 161.8 128 60.2
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 1.4e-37 159.8 129 65.1
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 4.0e-37 158.3 127 59.1
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 8.8e-37 157.1 121 57.0
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 7.5e-36 154.1 127 57.5
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 7.5e-36 154.1 102 73.5
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 1.3e-35 153.3 127 55.1
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 2.2e-35 152.5 130 57.7
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 4.8e-35 151.4 126 55.6
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 8.3e-35 150.6 127 55.9
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 8.3e-35 150.6 129 57.4
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 4.1e-34 148.3 130 58.5
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 5.4e-34 147.9 127 52.8
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 7.0e-34 147.5 130 59.2
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 7.0e-34 147.5 123 56.1
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 1.2e-33 146.7 126 54.0
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 4.5e-33 144.8 127 53.5
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 7.7e-33 144.1 128 55.5
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 1.0e-32 143.7 115 60.0
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 1.3e-32 143.3 129 56.6
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 1.3e-32 143.3 128 57.8
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 1.7e-32 142.9 126 54.8
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 6.5e-32 141.0 126 50.0
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 8.6e-32 140.6 123 53.7
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 1.1e-31 140.2 126 54.0
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 1.1e-31 140.2 126 54.0
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 1.1e-31 140.2 128 54.7
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 1.1e-31 140.2 123 55.3
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 1.5e-31 139.8 127 52.0
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 2.5e-31 139.0 123 53.7
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 3.2e-31 138.7 126 54.0
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 1.6e-30 136.3 140 50.0
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 1.6e-30 136.3 93 68.8
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 1.6e-30 136.3 127 49.6
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 2.1e-30 136.0 121 54.5
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 2.1e-30 136.0 128 56.2
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 2.8e-30 135.6 127 49.6
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 4.7e-30 134.8 113 57.5
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 6.1e-30 134.4 121 54.5
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 6.1e-30 134.4 114 53.5
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 6.1e-30 134.4 104 62.5
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 1.0e-29 133.7 100 60.0
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 1.0e-29 133.7 100 63.0
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 1.8e-29 132.9 129 54.3
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 2.3e-29 132.5 121 54.5
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 2.3e-29 132.5 121 54.5
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 4.0e-29 131.7 121 56.2
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 5.2e-29 131.3 132 53.0
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 1.2e-28 130.2 131 55.7
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 2.6e-28 129.0 102 58.8
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 3.4e-28 128.6 108 55.6
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 3.4e-28 128.6 113 55.8
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 5.7e-28 127.9 128 49.2
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 5.7e-28 127.9 115 51.3
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 7.5e-28 127.5 109 54.1
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 7.5e-28 127.5 116 52.6
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 9.8e-28 127.1 121 52.9
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 9.8e-28 127.1 128 53.1
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 1.7e-27 126.3 123 53.7
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 2.8e-27 125.6 115 50.4
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 4.9e-27 124.8 128 46.9
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 8.3e-27 124.0 115 50.4
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 8.3e-27 124.0 116 50.9
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 1.1e-26 123.6 108 55.6
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 1.1e-26 123.6 128 46.1
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 1.4e-26 123.2 128 46.1
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 1.4e-26 123.2 114 54.4
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 1.8e-26 122.9 104 60.6
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 1.8e-26 122.9 114 57.0
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 2.4e-26 122.5 114 54.4
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 5.4e-26 121.3 125 52.8
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 2.7e-25 119.0 103 52.4
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 2.7e-25 119.0 123 50.4
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 4.5e-25 118.2 119 52.9
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 4.5e-25 118.2 129 47.3
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 1.0e-24 117.1 128 50.8
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 1.3e-24 116.7 127 49.6
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 1.3e-24 116.7 116 50.9
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 1.3e-24 116.7 116 50.9
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 1.3e-24 116.7 116 51.7
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 1.7e-24 116.3 133 45.1
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 1.7e-24 116.3 132 51.5
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 2.9e-24 115.5 112 50.0
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 5.0e-24 114.8 124 50.0
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 8.6e-24 114.0 99 58.6
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 1.1e-23 113.6 113 49.6
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 1.1e-23 113.6 99 59.6
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 1.1e-23 113.6 103 54.4
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 1.1e-23 113.6 102 54.9
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 1.5e-23 113.2 136 48.5
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 4.3e-23 111.7 124 47.6
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 9.5e-23 110.5 130 46.9
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 9.5e-23 110.5 130 46.9
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 1.2e-22 110.2 103 52.4
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 1.2e-22 110.2 112 46.4
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 2.1e-22 109.4 114 50.9
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 2.8e-22 109.0 126 49.2
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 4.7e-22 108.2 104 52.9
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 6.1e-22 107.8 107 50.5
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 8.0e-22 107.5 114 48.2
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 4.0e-21 105.1 126 49.2
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 4.0e-21 105.1 131 44.3
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 4.0e-21 105.1 130 43.1
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 5.2e-21 104.8 104 49.0
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 1.2e-20 103.6 104 50.0
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 2.6e-20 102.4 129 46.5
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 5.7e-20 101.3 123 51.2
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 5.7e-20 101.3 123 51.2
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 5.7e-20 101.3 123 51.2
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 9.8e-20 100.5 121 47.9
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 2.9e-19 99.0 127 44.9
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 3.7e-19 98.6 100 49.0
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 3.7e-19 98.6 105 54.3
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 3.7e-19 98.6 105 51.4
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 4.9e-19 98.2 133 42.1
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 4.9e-19 98.2 122 45.1
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 8.3e-19 97.4 129 43.4
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 8.3e-19 97.4 129 43.4
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 8.3e-19 97.4 129 43.4
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 8.3e-19 97.4 129 43.4
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 8.3e-19 97.4 124 39.5
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 1.1e-18 97.1 98 48.0
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 1.4e-18 96.7 133 44.4
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 1.8e-18 96.3 87 54.0
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 7.0e-18 94.4 104 47.1
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 1.2e-17 93.6 104 42.3
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 1.6e-17 93.2 105 52.4
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 2.0e-17 92.8 101 49.5
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 1.7e-16 89.7 104 41.3
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 1.7e-16 89.7 102 52.0
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 2.3e-16 89.4 128 45.3
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 8.6e-16 87.4 122 42.6
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 1.9e-15 86.3 131 43.5
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 1.9e-15 86.3 131 43.5
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 2.5e-15 85.9 106 36.8
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 1.2e-14 83.6 116 44.0
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 1.6e-14 83.2 118 41.5
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 6.2e-14 81.3 106 38.7
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 8.0e-14 80.9 103 41.7
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 2.2e-11 72.8 76 50.0
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 2.9e-11 72.4 100 43.0
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 1.1e-10 70.5 67 49.3


User provided reference genes

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