Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 5.3e-68 260.8 121 100.0
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.5e-46 189.5 111 74.8
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 7.5e-46 187.2 107 75.7
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 5.4e-44 181.0 107 73.8
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 7.0e-44 180.6 112 72.3
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.2e-43 179.9 107 72.9
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 2.0e-43 179.1 113 71.7
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.5e-43 178.3 113 71.7
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 3.5e-43 178.3 107 73.8
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 4.5e-43 177.9 111 71.2
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 7.7e-43 177.2 112 70.5
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.0e-42 176.8 119 68.1
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 1.7e-42 176.0 113 72.6
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 2.9e-42 175.3 108 72.2
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.9e-42 175.3 89 93.3
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 3.8e-42 174.9 112 71.4
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 8.5e-42 173.7 113 73.5
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 8.5e-42 173.7 113 73.5
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 8.5e-42 173.7 107 72.9
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.9e-41 172.6 113 72.6
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.5e-41 172.2 111 66.7
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 4.2e-41 171.4 111 67.6
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 9.5e-41 170.2 111 66.7
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 9.5e-41 170.2 104 73.1
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 1.2e-40 169.9 108 71.3
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 8.0e-40 167.2 108 69.4
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 8.0e-40 167.2 109 70.6
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 8.0e-40 167.2 112 65.2
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 8.0e-40 167.2 109 71.6
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 3.0e-39 165.2 110 68.2
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 3.0e-39 165.2 111 64.9
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 4.0e-39 164.9 117 68.4
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 8.8e-39 163.7 109 68.8
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.2e-38 163.3 119 62.2
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.5e-38 162.9 112 68.8
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 2.0e-38 162.5 112 65.2
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 2.0e-38 162.5 111 64.0
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 3.4e-38 161.8 111 65.8
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 3.4e-38 161.8 105 66.7
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 4.4e-38 161.4 111 64.9
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 5.7e-38 161.0 111 64.0
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 7.5e-38 160.6 105 69.5
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 9.8e-38 160.2 110 63.6
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 9.8e-38 160.2 111 65.8
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 1.3e-37 159.8 111 61.3
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 1.3e-37 159.8 105 67.6
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 1.7e-37 159.5 112 64.3
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 2.2e-37 159.1 105 66.7
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 2.8e-37 158.7 108 67.6
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 3.7e-37 158.3 112 64.3
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 4.9e-37 157.9 111 64.0
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 4.9e-37 157.9 108 66.7
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 4.9e-37 157.9 108 66.7
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 6.3e-37 157.5 105 64.8
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 6.3e-37 157.5 112 64.3
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 8.3e-37 157.1 108 65.7
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 8.3e-37 157.1 108 65.7
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 1.1e-36 156.8 110 66.4
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.8e-36 156.0 111 63.1
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 1.8e-36 156.0 108 65.7
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 3.1e-36 155.2 106 66.0
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.1e-36 155.2 112 59.8
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 4.1e-36 154.8 150 54.0
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 4.1e-36 154.8 111 61.3
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 4.1e-36 154.8 107 67.3
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 5.4e-36 154.5 108 65.7
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.2e-35 153.3 113 62.8
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 1.2e-35 153.3 109 63.3
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 1.2e-35 153.3 102 71.6
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 1.6e-35 152.9 103 65.0
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 1.6e-35 152.9 107 61.7
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 2.0e-35 152.5 103 66.0
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 3.5e-35 151.8 103 66.0
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 3.5e-35 151.8 108 64.8
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 4.5e-35 151.4 108 62.0
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 5.9e-35 151.0 103 65.0
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 7.8e-35 150.6 104 68.3
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 1.0e-34 150.2 108 63.9
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 1.3e-34 149.8 150 52.7
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 1.3e-34 149.8 110 65.5
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.3e-34 149.8 105 62.9
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 1.7e-34 149.4 103 64.1
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 2.3e-34 149.1 103 65.0
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 2.3e-34 149.1 103 65.0
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 2.3e-34 149.1 103 64.1
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.9e-34 148.7 103 64.1
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 3.8e-34 148.3 105 65.7
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 3.8e-34 148.3 108 63.0
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 5.0e-34 147.9 103 63.1
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 6.6e-34 147.5 105 62.9
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 9.5e-33 143.7 103 60.2
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.6e-32 142.9 104 62.5
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.8e-32 142.1 103 61.2
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 6.1e-32 141.0 86 73.3
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 2.3e-31 139.0 108 61.1
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.3e-31 139.0 116 56.9
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 3.0e-31 138.7 112 58.9
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 2.6e-30 135.6 114 58.8
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.3e-29 133.3 112 52.7
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 6.4e-29 131.0 103 57.3
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 1.1e-28 130.2 101 62.4
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.2e-27 126.7 84 71.4
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.0e-27 125.9 111 53.2
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 2.3e-26 122.5 81 66.7
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 3.9e-26 121.7 81 71.6
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 4.4e-22 108.2 72 66.7
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 9.8e-22 107.1 117 44.4
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 1.0e-18 97.1 116 41.4
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 1.3e-18 96.7 64 65.6
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 5.0e-18 94.7 72 61.1
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 6.6e-18 94.4 56 73.2
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 4.7e-16 88.2 90 50.0
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 2.6e-14 82.4 63 60.3
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 2.9e-13 79.0 56 55.4
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 4.9e-13 78.2 53 64.2
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 2.4e-12 75.9 74 55.4
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 1.0e-10 70.5 46 69.6
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 5.1e-10 68.2 46 58.7
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 2.8e-08 62.4 46 63.0
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.8e-07 59.7 91 36.3
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 6.8e-07 57.8 40 65.0


User provided reference genes

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