Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.7e-96 355.9 168 100.0
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 2.9e-72 275.4 165 80.6
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.1e-69 264.6 165 75.8
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 5.3e-66 254.6 165 72.7
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 9.0e-66 253.8 165 72.1
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 1.7e-64 249.6 163 69.9
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 2.9e-64 248.8 165 69.7
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 2.9e-64 248.8 163 74.2
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 5.0e-64 248.1 163 73.0
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 5.0e-64 248.1 163 73.0
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 8.4e-64 247.3 163 69.3
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.9e-63 246.1 165 70.9
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 1.9e-63 246.1 163 70.6
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 2.5e-63 245.7 163 71.2
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 4.2e-63 245.0 165 70.9
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 4.2e-63 245.0 163 71.2
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.2e-63 245.0 163 71.8
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 5.5e-63 244.6 163 72.4
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 5.5e-63 244.6 163 71.2
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 7.2e-63 244.2 163 69.3
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 7.2e-63 244.2 163 68.7
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 9.3e-63 243.8 162 72.2
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 1.2e-62 243.4 165 69.7
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 2.1e-62 242.7 163 71.2
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 2.1e-62 242.7 163 71.2
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 2.1e-62 242.7 162 72.2
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 2.7e-62 242.3 163 69.9
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 6.1e-62 241.1 163 68.1
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 6.1e-62 241.1 163 69.3
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 6.1e-62 241.1 163 69.9
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 6.1e-62 241.1 163 69.9
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 7.9e-62 240.7 162 71.0
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 7.9e-62 240.7 162 68.5
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 1.3e-61 240.0 165 67.9
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.3e-61 240.0 165 67.3
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.3e-61 240.0 165 67.3
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.8e-61 239.6 163 69.9
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 2.3e-61 239.2 165 68.5
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 3.0e-61 238.8 163 69.9
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 3.9e-61 238.4 156 70.5
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 3.9e-61 238.4 165 67.9
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 3.9e-61 238.4 165 67.9
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 3.9e-61 238.4 162 70.4
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 5.1e-61 238.0 163 68.1
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 6.7e-61 237.7 162 70.4
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 8.7e-61 237.3 163 68.7
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 1.1e-60 236.9 162 68.5
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.5e-60 236.5 162 69.1
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.9e-60 236.1 162 69.1
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 3.3e-60 235.3 165 66.7
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 4.3e-60 235.0 165 67.9
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 4.3e-60 235.0 165 67.9
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.3e-60 235.0 163 66.3
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 7.4e-60 234.2 163 66.9
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 7.4e-60 234.2 162 69.1
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 7.4e-60 234.2 163 66.9
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 7.4e-60 234.2 162 69.8
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 9.7e-60 233.8 163 66.9
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.6e-59 233.0 162 69.1
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 2.8e-59 232.3 162 69.1
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 2.8e-59 232.3 163 66.9
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 3.7e-59 231.9 163 65.6
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 3.7e-59 231.9 162 68.5
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 3.7e-59 231.9 165 67.3
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 4.8e-59 231.5 165 66.1
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 4.8e-59 231.5 162 65.4
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 6.3e-59 231.1 162 68.5
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 6.3e-59 231.1 162 68.5
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 6.3e-59 231.1 194 59.8
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 8.2e-59 230.7 162 69.1
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 8.2e-59 230.7 162 68.5
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 1.1e-58 230.3 162 68.5
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 1.1e-58 230.3 162 68.5
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 1.1e-58 230.3 162 68.5
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 1.1e-58 230.3 162 68.5
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 1.1e-58 230.3 162 67.3
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 1.4e-58 229.9 162 68.5
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.4e-58 229.9 165 64.2
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 1.8e-58 229.6 182 63.2
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.3e-58 228.0 162 64.8
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 6.9e-58 227.6 163 65.6
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 9.0e-58 227.3 162 66.7
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 9.0e-58 227.3 162 67.3
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 2.6e-57 225.7 162 65.4
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 4.5e-57 224.9 163 65.6
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 5.9e-57 224.6 177 62.7
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 5.9e-57 224.6 163 64.4
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 7.7e-57 224.2 163 65.6
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 7.7e-57 224.2 163 63.8
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 2.9e-56 222.2 163 63.2
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 3.8e-56 221.9 165 63.0
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 5.0e-56 221.5 162 66.7
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 5.0e-56 221.5 163 63.2
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 1.1e-55 220.3 163 65.6
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 1.1e-55 220.3 162 63.0
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.9e-55 219.5 164 63.4
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 3.2e-55 218.8 192 57.8
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 5.5e-55 218.0 145 72.4
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 1.6e-54 216.5 163 62.6
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.6e-54 215.3 164 62.8
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 4.6e-54 214.9 165 61.2
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 7.9e-54 214.2 163 65.0
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.0e-53 212.2 163 63.2
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 3.9e-53 211.8 224 50.0
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 8.8e-53 210.7 146 68.5
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 7.4e-52 207.6 164 59.1
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.7e-51 206.5 163 60.1
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 2.8e-51 205.7 162 62.3
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 5.3e-50 201.4 145 65.5
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 5.0e-48 194.9 162 58.0
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 2.5e-47 192.6 145 62.8
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 5.3e-42 174.9 162 52.5
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 5.5e-39 164.9 165 49.7
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 1.3e-32 143.7 162 45.7
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 4.8e-27 125.2 161 41.6
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 2.3e-21 106.3 106 53.8
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 3.4e-20 102.4 146 37.7
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 3.8e-16 89.0 70 64.3
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 8.6e-16 87.8 57 68.4
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.5e-12 77.0 43 76.7
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.5e-12 77.0 43 76.7
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 5.7e-12 75.1 43 81.4
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.2e-11 73.2 43 79.1
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 4.9e-11 72.0 101 41.6
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.1e-10 70.9 81 48.1
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 2.7e-09 66.2 40 77.5


User provided reference genes

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