Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0944 Trochodendron aralioides HOM05D004640 ORTHO05D005489 1.1e-141 506.5 242 100.0
TAR381G0517 Trochodendron aralioides HOM05D004640 ORTHO05D005489 1.1e-43 181.0 130 67.7
Nn7g37934 Nelumbo nucifera HOM05D004640 ORTHO05D005489 3.0e-38 162.9 122 64.8
Thecc.02G088200 Theobroma cacao HOM05D004640 ORTHO05D005489 3.2e-32 142.9 127 50.4
CiPaw.05G048700 Carya illinoinensis HOM05D004640 ORTHO05D005489 7.2e-32 141.7 130 49.2
Haze_01724 Corylus avellana HOM05D004640 ORTHO05D005489 3.6e-31 139.4 127 49.6
QL02p099200 Quercus lobata HOM05D004640 ORTHO05D005489 3.6e-31 139.4 130 50.0
MBI01_g44452_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 8.8e-30 134.8 130 47.7
Dinv24776 Davidia involucrata HOM05D004640 ORTHO05D005489 7.5e-29 131.7 130 52.3
Duzib132G0532 Durio zibethinus HOM05D004640 ORTHO05D005489 7.5e-29 131.7 127 44.9
COL.COLO4_11782 Corchorus olitorius HOM05D004640 ORTHO05D005489 9.7e-29 131.3 127 47.2
Duzib052G0332 Durio zibethinus HOM05D004640 ORTHO05D005489 1.3e-28 131.0 128 46.9
Gorai.012G151900 Gossypium raimondii HOM05D004640 ORTHO05D005489 1.7e-28 130.6 126 46.0
Gohir.A04G121200 Gossypium hirsutum HOM05D004640 ORTHO05D005489 3.7e-28 129.4 126 46.0
TWI59G0201 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 1.8e-27 127.1 129 46.5
Aqoxy1G01535 Aquilegia oxysepala HOM05D004640 ORTHO05D005489 7.7e-26 121.7 122 51.6
Gorai.002G006000 Gossypium raimondii HOM05D004640 ORTHO05D005489 7.7e-26 121.7 126 44.4
CsaV3_3G019120 Cucumis sativus L. HOM05D004640 ORTHO05D005489 1.0e-25 121.3 130 48.5
TWI14G1252 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 1.0e-25 121.3 128 45.3
MBI01_g00654_MAGBIO Magnolia biondii HOM05D004640 ORTHO05D005489 1.3e-25 120.9 107 49.5
PSO541G2962 Papaver somniferum HOM05D004640 ORTHO05D005489 2.2e-25 120.2 126 50.0
ClCG05G009610 Citrullus lanatus HOM05D004640 ORTHO05D005489 2.9e-25 119.8 126 50.8
Hma1.2p1_0296F.1_g116830 Hydrangea macrophylla HOM05D004640 ORTHO05D005489 3.8e-25 119.4 129 47.3
PSO675G0104 Papaver somniferum HOM05D004640 ORTHO05D005489 3.8e-25 119.4 126 50.0
Glyma.15G045900 Glycine max HOM05D004640 ORTHO05D005489 5.0e-25 119.0 127 42.5
Gohir.D04G163933 Gossypium hirsutum HOM05D004640 ORTHO05D005489 5.0e-25 119.0 108 48.1
Eucgr.I02737 Eucalyptus grandis HOM05D004640 ORTHO05D005489 6.5e-25 118.6 128 44.5
Rhsim05G0203300 Rhododendron simsii HOM05D004640 ORTHO05D005489 1.5e-24 117.5 119 47.9
Glyma.08G187100 Glycine max HOM05D004640 ORTHO05D005489 1.9e-24 117.1 127 42.5
MELO3C019462.2 Cucumis melo HOM05D004640 ORTHO05D005489 2.5e-24 116.7 130 49.2
Actinidia19942 Actinidia chinensis HOM05D004640 ORTHO05D005489 3.2e-24 116.3 123 46.3
Manes.10G125900 Manihot esculenta HOM05D004640 ORTHO05D005489 4.2e-24 115.9 127 43.3
arahy.Tifrunner.gnm1.ann1.8G9BB5 Arachis hypogaea HOM05D004640 ORTHO05D005489 7.2e-24 115.2 120 45.8
arahy.Tifrunner.gnm1.ann1.Y1PSG0 Arachis hypogaea HOM05D004640 ORTHO05D005489 7.2e-24 115.2 120 45.8
Lalb_Chr20g0123511 Lupinus albus HOM05D004640 ORTHO05D005489 1.2e-23 114.4 130 42.3
Atru.chr6.619 Acer truncatum HOM05D004640 ORTHO05D005489 4.7e-23 112.5 128 42.2
Atru.chr6.621_Atru.chr6.622 Acer truncatum HOM05D004640 ORTHO05D005489 4.7e-23 112.5 128 42.2
CSS0031954 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 4.7e-23 112.5 121 44.6
Ca_00068_v3 Cicer arietinum L. HOM05D004640 ORTHO05D005489 1.8e-22 110.5 120 43.3
TPR.G2079 Trifolium pratense HOM05D004640 ORTHO05D005489 1.8e-22 110.5 128 40.6
Phvul.006G215300 Phaseolus vulgaris HOM05D004640 ORTHO05D005489 2.3e-22 110.2 127 39.4
Psat1g221200 Pisum sativum HOM05D004640 ORTHO05D005489 3.0e-22 109.8 128 39.8
CSS0010715 Camellia sinensis var. sinensis HOM05D004640 ORTHO05D005489 4.0e-22 109.4 121 44.6
Sed0025782 Sechium edule HOM05D004640 ORTHO05D005489 4.0e-22 109.4 119 48.7
TWI23G1121 Tripterygium wilfordii HOM05D004640 ORTHO05D005489 4.0e-22 109.4 136 40.4
VMungo0540G1095 Vigna mungo HOM05D004640 ORTHO05D005489 2.0e-21 107.1 120 41.7
vmacro12737 Vaccinium macrocarpon HOM05D004640 ORTHO05D005489 4.4e-21 105.9 116 43.1
Os03g0659900 Oryza sativa ssp. japonica HOM05D004640 ORTHO05D005489 1.6e-18 97.4 116 41.4
PGR142G2697 Punica granatum HOM05D004640 ORTHO05D005489 2.0e-18 97.1 128 39.1
HPP92_017742 Vanilla planifolia HOM05D004640 ORTHO05D005489 3.5e-18 96.3 125 41.6
Medtr2g006880 Medicago truncatula HOM05D004640 ORTHO05D005489 4.5e-18 95.9 127 36.2
Lj6g0021650 Lotus japonicus HOM05D004640 ORTHO05D005489 1.3e-17 94.4 127 37.0
Ciclev10000505m.g Citrus clementina HOM05D004640 ORTHO05D005489 1.7e-17 94.0 121 42.1
Lj4C822G11 Lonicera japonica HOM05D004640 ORTHO05D005489 1.9e-16 90.5 130 37.7
HPP92_017709 Vanilla planifolia HOM05D004640 ORTHO05D005489 2.5e-16 90.1 117 42.7
CDE12G0153 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 3.2e-16 89.7 127 39.4
ECA233G0813 Erigeron canadensis HOM05D004640 ORTHO05D005489 4.2e-16 89.4 126 37.3
Gohir.A01G005001 Gossypium hirsutum HOM05D004640 ORTHO05D005489 7.2e-16 88.6 125 36.0
Gohir.D01G005100 Gossypium hirsutum HOM05D004640 ORTHO05D005489 2.1e-15 87.0 123 35.8
DCAR_021303 Daucus carota HOM05D004640 ORTHO05D005489 8.0e-15 85.1 113 38.9
Sc09g0001940 Simmondsia chinensis HOM05D004640 ORTHO05D005489 1.0e-14 84.7 129 38.0
CANSAT11G0894 Cannabis sativa HOM05D004640 ORTHO05D005489 1.8e-14 84.0 123 39.8
Hund21765 Selenicereus undatus HOM05D004640 ORTHO05D005489 2.3e-14 83.6 130 36.2
Potri.001G211700 Populus trichocarpa HOM05D004640 ORTHO05D005489 4.0e-14 82.8 109 44.0
Lsat_1_v5_gn_5_71601 Lactuca sativa HOM05D004640 ORTHO05D005489 5.2e-14 82.4 123 35.8
GSVIVG01022882001 Vitis vinifera HOM05D004640 ORTHO05D005489 4.4e-13 79.3 130 35.4
SEGI_15466 Sequoiadendron giganteum HOM05D004640 ORTHO05D005489 9.8e-13 78.2 122 36.1
Haze_01802 Corylus avellana HOM05D004640 ORTHO05D005489 1.7e-12 77.4 54 64.8
AUR62000605 Chenopodium quinoa HOM05D004640 ORTHO05D005489 2.8e-12 76.6 103 38.8
AUR62006957 Chenopodium quinoa HOM05D004640 ORTHO05D005489 2.8e-12 76.6 103 38.8
Cc09_g07620 Coffea canephora HOM05D004640 ORTHO05D005489 3.7e-12 76.3 110 38.2
CDE12G0207 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 8.3e-12 75.1 130 33.8
EL10Ac4g09724 Beta vulgaris HOM05D004640 ORTHO05D005489 4.1e-11 72.8 103 35.9
Ah.06g188240 Amaranthus hybridus HOM05D004640 ORTHO05D005489 2.7e-10 70.1 119 30.3
Actinidia36578 Actinidia chinensis HOM05D004640 ORTHO05D005489 3.5e-10 69.7 59 55.9
SGA_v2.0_scaffold51G18853 Striga asiatica HOM05D004640 ORTHO05D005489 1.7e-09 67.4 121 33.1
Hund07189 Selenicereus undatus HOM05D004640 ORTHO05D005489 2.9e-09 66.6 110 34.5
MSTRG.23232 Avicennia marina HOM05D004640 ORTHO05D005489 3.8e-09 66.2 99 39.4
CDE12G0675 Ceratophyllum demersum HOM05D004640 ORTHO05D005489 5.0e-09 65.9 59 47.5
Migut.H02548 Erythranthe guttata HOM05D004640 ORTHO05D005489 1.9e-08 63.9 119 33.6
THA.LOC104809619 Tarenaya hassleriana HOM05D004640 ORTHO05D005489 6.1e-07 58.9 69 42.0
FvH4_5g29191 Fragaria vesca HOM05D004640 ORTHO05D005489 8.0e-07 58.5 62 41.9
FAN04G1948 Fragaria x ananassa HOM05D004640 ORTHO05D005489 8.0e-07 58.5 62 41.9
FAN08G0534 Fragaria x ananassa HOM05D004640 ORTHO05D005489 8.0e-07 58.5 62 41.9
FAN18G0226 Fragaria x ananassa HOM05D004640 ORTHO05D005489 8.0e-07 58.5 62 41.9
FAN13G0955 Fragaria x ananassa HOM05D004640 ORTHO05D005489 2.3e-06 57.0 62 41.9
RcHm_v2.0_Chr1g0332251 Rosa chinensis HOM05D004640 ORTHO05D005489 3.0e-06 56.6 78 38.5
Lsat_1_v5_gn_5_81581 Lactuca sativa HOM05D004640 ORTHO05D005489 5.2e-06 55.8 104 34.6


User provided reference genes

Program Settings