Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.7e-115 419.5 229 100.0
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 5.8e-100 367.9 230 88.7
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 6.0e-97 357.8 230 85.7
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 1.3e-91 340.1 228 73.7
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 2.2e-91 339.3 225 83.6
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 5.0e-91 338.2 223 77.1
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 1.4e-90 336.7 224 81.2
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 4.2e-90 335.1 225 74.2
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 7.2e-90 334.3 229 81.7
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 6.7e-88 327.8 226 76.5
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 4.3e-87 325.1 230 77.4
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 9.7e-87 323.9 224 79.9
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.3e-86 323.6 231 71.9
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 1.3e-86 323.6 225 79.6
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.7e-86 323.2 227 78.0
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 1.7e-86 323.2 224 78.1
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 2.8e-86 322.4 223 78.5
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 2.8e-86 322.4 235 71.1
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.7e-86 322.0 225 79.1
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.8e-86 321.6 225 78.7
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 1.1e-85 320.5 213 73.2
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.1e-85 320.5 225 78.7
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.1e-85 320.5 220 75.5
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.1e-85 320.5 220 75.5
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 1.1e-85 320.5 225 80.0
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 1.8e-85 319.7 226 77.9
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 6.9e-85 317.8 226 76.5
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 1.2e-84 317.0 226 77.9
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-84 317.0 220 79.1
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.2e-84 317.0 225 78.2
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 2.6e-84 315.8 229 75.5
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 5.9e-84 314.7 223 78.9
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 7.7e-84 314.3 226 77.0
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.0e-83 313.9 209 82.8
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.3e-83 313.5 216 80.6
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 2.9e-83 312.4 230 68.3
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 3.8e-83 312.0 229 72.9
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 3.8e-83 312.0 224 76.3
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 5.0e-83 311.6 229 73.8
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 6.5e-83 311.2 216 80.1
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 6.5e-83 311.2 206 85.0
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.1e-82 310.5 228 68.0
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 1.1e-82 310.5 224 76.8
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 1.4e-82 310.1 208 72.6
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.5e-82 309.3 233 74.2
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 3.2e-82 308.9 226 69.0
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 5.5e-82 308.1 216 79.6
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.2e-81 307.0 208 82.7
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 1.6e-81 306.6 220 70.9
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 2.1e-81 306.2 229 72.1
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 2.7e-81 305.8 226 75.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.4e-80 303.5 209 71.3
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 1.4e-80 303.5 213 77.5
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 1.4e-80 303.5 224 73.2
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.8e-80 303.1 213 77.9
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 3.0e-80 302.4 209 70.3
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 5.1e-80 301.6 209 70.8
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 5.1e-80 301.6 226 75.2
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 7.4e-79 297.7 224 69.6
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 9.7e-79 297.4 173 81.5
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 1.7e-78 296.6 209 79.4
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 1.7e-78 296.6 207 71.5
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 2.2e-78 296.2 209 77.5
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 2.2e-78 296.2 209 77.0
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 3.7e-78 295.4 209 76.6
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 3.7e-78 295.4 209 76.6
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 4.8e-78 295.0 272 57.7
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 8.2e-78 294.3 223 73.5
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 1.4e-77 293.5 210 73.3
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 1.4e-77 293.5 216 74.1
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.8e-77 293.1 219 74.4
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.4e-77 292.7 224 71.0
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 4.1e-77 292.0 209 77.0
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 4.1e-77 292.0 209 77.0
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 4.1e-77 292.0 209 77.0
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 5.3e-77 291.6 207 76.3
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 7.0e-77 291.2 224 73.7
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 7.0e-77 291.2 207 70.0
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.2e-76 290.4 209 76.6
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.5e-76 290.0 209 76.6
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 3.5e-76 288.9 207 76.8
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 4.5e-76 288.5 211 76.3
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 1.0e-75 287.3 209 75.6
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.0e-75 287.3 224 71.0
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 1.3e-75 287.0 224 71.9
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 2.9e-75 285.8 209 76.1
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 2.9e-75 285.8 171 77.8
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 2.9e-75 285.8 223 71.7
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 3.8e-75 285.4 211 75.8
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 3.8e-75 285.4 205 77.6
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 3.8e-75 285.4 213 74.2
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 3.8e-75 285.4 214 66.4
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 6.5e-75 284.6 207 76.3
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 1.9e-74 283.1 225 70.7
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 4.2e-74 282.0 209 73.7
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 4.2e-74 282.0 210 63.8
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 7.2e-74 281.2 202 77.2
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.2e-73 280.4 207 75.8
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.8e-72 276.6 198 77.3
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 2.3e-72 276.2 207 66.2
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 3.9e-72 275.4 211 72.5
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 1.1e-71 273.9 207 75.8
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 7.4e-71 271.2 226 66.4
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 8.2e-70 267.7 211 70.1
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 4.1e-69 265.4 205 71.2
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 2.1e-65 253.1 211 63.5
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 2.7e-65 252.7 215 58.1
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 1.4e-64 250.4 215 63.3
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 3.0e-64 249.2 212 59.4
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 1.2e-57 227.3 227 62.6
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.3e-51 207.2 230 57.4
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 2.3e-51 206.5 211 56.9
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 1.1e-50 204.1 172 57.6
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 2.6e-47 193.0 212 46.7
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 1.7e-43 180.3 202 53.0
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 2.1e-41 173.3 134 62.7
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 1.4e-37 160.6 220 49.5
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 5.0e-35 152.1 99 74.7
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 6.0e-20 102.1 88 75.0
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 7.3e-18 95.1 82 54.9
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 8.4e-14 81.6 47 76.6
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 3.3e-10 69.7 94 45.7
Sc03g0001840 Simmondsia chinensis HOM05D001905 ORTHO05D001820 3.4e-07 59.7 162 30.9
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 9.9e-07 58.2 84 34.5
FvH4_1g14800 Fragaria vesca HOM05D000710 ORTHO05D000336 1.7e-06 57.4 164 29.3
FAN23G0561 Fragaria x ananassa HOM05D000710 ORTHO05D000336 1.7e-06 57.4 157 29.9
FAN19G1902 Fragaria x ananassa HOM05D000710 ORTHO05D000336 3.8e-06 56.2 164 28.7
Glyma.13G220200 Glycine max HOM05D000710 ORTHO05D000336 4.9e-06 55.8 171 31.0
Medtr5g016930 Medicago truncatula HOM05D006615 ORTHO05D007999 6.4e-06 55.5 53 52.8


User provided reference genes

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