Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 3.1e-33 144.4 68 100.0
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 1.3e-26 122.5 67 85.1
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 1.1e-25 119.4 69 84.1
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 2.4e-25 118.2 69 82.6
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 3.1e-25 117.9 67 79.1
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 4.1e-25 117.5 68 80.9
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 9.1e-25 116.3 69 82.6
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 2.2e-23 111.7 70 78.6
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 3.8e-23 110.9 68 79.4
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 8.5e-23 109.8 71 74.6
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 2.5e-22 108.2 68 79.4
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 4.2e-22 107.5 68 73.5
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 5.5e-22 107.1 68 73.5
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 9.4e-22 106.3 68 73.5
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.2e-21 105.9 69 78.3
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 1.2e-21 105.9 69 78.3
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 1.6e-21 105.5 68 76.5
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.7e-21 104.8 68 72.1
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 3.6e-21 104.4 69 73.9
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 3.6e-21 104.4 68 72.1
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 4.7e-21 104.0 69 75.4
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 8.0e-21 103.2 67 76.1
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 1.0e-20 102.8 70 75.7
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 2.3e-20 101.7 69 73.9
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 5.2e-20 100.5 68 70.6
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 5.2e-20 100.5 68 73.5
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 5.2e-20 100.5 69 72.5
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 1.2e-19 99.4 68 70.6
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 1.5e-19 99.0 72 70.8
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.5e-19 99.0 69 72.5
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 4.4e-19 97.4 72 68.1
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 4.4e-19 97.4 68 72.1
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 5.7e-19 97.1 69 72.5
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 7.5e-19 96.7 72 68.1
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 3.7e-18 94.4 70 71.4
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 1.1e-17 92.8 70 70.0
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 1.4e-17 92.4 70 67.1
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 2.4e-17 91.7 70 65.7
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 4.1e-17 90.9 74 64.9
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 4.1e-17 90.9 71 71.8
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 5.3e-17 90.5 74 63.5
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 1.2e-16 89.4 72 65.3
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 2.0e-16 88.6 74 63.5
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 2.0e-16 88.6 82 58.5
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 4.5e-16 87.4 81 58.0
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 1.3e-15 85.9 68 63.2
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 1.7e-15 85.5 85 55.3
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 2.2e-15 85.1 68 64.7
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 2.9e-15 84.7 86 53.5
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 3.8e-15 84.3 86 54.7
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 5.0e-15 84.0 85 51.8
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 6.5e-15 83.6 85 52.9
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 1.9e-14 82.0 85 55.3
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 2.5e-14 81.6 76 59.2
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 4.2e-14 80.9 69 62.3
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 5.5e-14 80.5 69 60.9
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 5.5e-14 80.5 72 62.5
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 7.2e-14 80.1 86 54.7
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 9.4e-14 79.7 86 54.7
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.2e-13 79.3 67 62.7
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 2.7e-13 78.2 68 60.3
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 3.6e-13 77.8 85 52.9
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 6.1e-13 77.0 85 52.9
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 8.0e-13 76.6 74 54.1
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 5.2e-12 73.9 57 66.7
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 5.7e-11 70.5 69 60.9
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 5.7e-11 70.5 69 60.9
QL02p013929 Quercus lobata HOM05D008020 ORTHO05D010140 6.3e-10 67.0 42 76.2
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 8.3e-10 66.6 72 61.1
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 3.5e-08 61.2 74 52.7
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 1.1e-06 56.2 41 68.3
MBI08_g42076_MAGBIO Magnolia biondii HOM05D008020 ORTHO05D010140 5.5e-06 53.9 38 71.1


User provided reference genes

Program Settings