Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 2.9e-126 455.3 237 100.0
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 3.1e-80 302.4 234 71.4
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 4.1e-80 302.0 242 65.7
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 4.5e-79 298.5 242 66.1
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 4.7e-76 288.5 239 65.7
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 1.8e-75 286.6 241 67.2
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 3.0e-75 285.8 230 67.8
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 8.8e-75 284.3 239 64.4
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.1e-74 283.9 239 64.0
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 2.0e-74 283.1 239 68.2
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 2.0e-74 283.1 232 67.2
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 9.7e-74 280.8 243 63.0
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 1.8e-72 276.6 228 63.2
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 4.1e-72 275.4 234 65.0
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 2.0e-71 273.1 220 65.9
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.5e-71 272.3 234 61.5
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 4.5e-71 271.9 231 62.3
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 7.7e-71 271.2 238 63.4
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 1.0e-70 270.8 228 63.6
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.7e-70 270.0 238 62.6
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 2.5e-69 266.2 247 61.5
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 2.5e-69 266.2 219 63.0
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 2.5e-69 266.2 249 60.2
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 1.2e-68 263.8 215 68.8
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.0e-67 260.8 239 61.9
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 1.8e-67 260.0 249 59.0
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.8e-67 260.0 239 61.5
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 5.2e-67 258.5 242 59.5
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 8.8e-67 257.7 230 60.9
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 1.2e-66 257.3 237 59.5
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 2.0e-66 256.5 237 59.9
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 3.4e-66 255.8 239 60.7
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 5.7e-66 255.0 192 65.1
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 7.5e-66 254.6 239 60.3
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 9.7e-66 254.2 239 62.3
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 1.7e-65 253.4 202 67.3
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 1.7e-65 253.4 239 59.4
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.7e-65 253.4 238 59.7
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.1e-64 250.8 211 62.6
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 1.4e-64 250.4 233 58.8
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 4.1e-64 248.8 229 58.5
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 5.3e-64 248.4 184 69.0
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 7.0e-64 248.1 192 63.5
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 9.1e-64 247.7 238 56.3
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 3.5e-63 245.7 228 59.2
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 5.9e-63 245.0 230 59.1
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 7.7e-63 244.6 192 65.6
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 7.7e-63 244.6 239 56.1
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 7.7e-63 244.6 193 65.3
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 1.3e-62 243.8 192 65.6
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.3e-62 243.8 241 57.3
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 1.7e-62 243.4 231 58.4
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 1.7e-62 243.4 228 59.2
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 2.9e-62 242.7 228 56.1
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 8.5e-62 241.1 196 63.8
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 1.9e-61 240.0 217 59.0
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 1.9e-61 240.0 228 55.3
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.5e-61 239.6 227 57.7
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 2.5e-61 239.6 189 67.2
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 3.2e-61 239.2 242 56.6
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 3.2e-61 239.2 293 51.2
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 5.5e-61 238.4 192 62.5
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 5.5e-61 238.4 232 55.2
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 7.2e-61 238.0 166 72.3
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 6.1e-60 235.0 193 62.2
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 2.3e-59 233.0 211 62.6
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 2.3e-59 233.0 213 56.3
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 3.0e-59 232.6 194 61.9
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 3.0e-59 232.6 217 57.6
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 6.8e-59 231.5 214 57.0
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 8.8e-59 231.1 217 57.6
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 8.8e-59 231.1 202 58.4
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 1.2e-58 230.7 193 62.2
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.5e-58 230.3 217 56.2
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.5e-58 230.3 207 60.4
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 2.0e-58 229.9 218 56.0
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 7.5e-58 228.0 192 59.9
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 7.5e-58 228.0 163 66.9
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 2.2e-57 226.5 217 55.8
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 4.2e-53 212.2 192 60.4
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 4.7e-52 208.8 228 53.1
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 5.2e-51 205.3 205 53.7
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 6.8e-51 204.9 166 62.7
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 8.9e-51 204.5 205 53.2
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 4.1e-48 195.7 229 50.2
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 5.6e-45 185.3 237 47.3
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 1.2e-42 177.6 180 58.3
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.0e-42 176.8 227 49.3
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 2.6e-42 176.4 210 50.5
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 7.5e-42 174.9 212 45.3
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.4e-41 171.8 225 48.9
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 2.7e-39 166.4 122 65.6
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 1.1e-37 161.0 170 48.2
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 2.5e-37 159.8 189 47.1
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 5.2e-35 152.1 175 46.9
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 2.2e-33 146.7 191 44.5
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.9e-32 143.7 134 55.2
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 1.2e-31 141.0 127 59.1
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 5.1e-30 135.6 126 59.5
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.8e-27 125.2 89 69.7
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 2.1e-23 113.6 109 57.8
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 3.6e-20 102.8 115 47.8
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 6.2e-20 102.1 97 53.6
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 1.4e-19 100.9 256 30.5
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 5.1e-14 82.4 53 75.5
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 3.8e-09 66.2 45 68.9
Ah.05g167420 Amaranthus hybridus HOM05D007221 ORTHO05D009204 2.4e-08 63.5 42 71.4
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 6.6e-06 55.5 82 42.7


User provided reference genes

Program Settings