Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 4.9e-202 707.6 362 100.0
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 4.2e-169 598.2 365 84.4
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 1.3e-149 533.5 362 76.0
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 5.3e-148 528.1 369 76.7
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 2.0e-147 526.2 365 76.4
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.3e-146 523.5 315 84.4
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 8.5e-146 520.8 365 75.6
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.1e-145 520.4 368 74.5
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 3.6e-144 515.4 362 73.8
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 4.7e-144 515.0 300 85.0
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.4e-143 513.5 364 73.6
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.8e-143 513.1 359 74.1
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.3e-143 512.7 366 73.2
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 3.0e-143 512.3 365 74.5
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 6.8e-143 511.1 374 72.7
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 8.8e-143 510.8 362 73.5
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 5.7e-142 508.1 361 72.6
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 7.5e-142 507.7 360 73.3
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.3e-141 506.9 366 71.9
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 2.8e-141 505.8 358 74.3
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 4.1e-140 501.9 324 78.4
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 5.4e-140 501.5 361 74.2
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 2.7e-139 499.2 366 71.6
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 7.7e-139 497.7 316 80.7
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.3e-138 496.9 421 65.6
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 2.2e-138 496.1 369 71.0
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 2.2e-138 496.1 302 83.1
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.9e-138 495.7 370 71.4
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 5.0e-138 495.0 363 70.8
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 8.5e-138 494.2 363 71.1
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 1.1e-137 493.8 313 79.2
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.5e-137 492.7 361 69.3
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.5e-137 492.7 329 76.0
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 1.2e-136 490.3 319 78.1
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.8e-136 489.2 302 79.8
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 3.6e-136 488.8 312 78.5
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 4.7e-136 488.4 319 77.1
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 1.0e-135 487.3 354 73.2
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.3e-135 486.1 335 75.8
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 3.0e-135 485.7 301 80.4
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 5.2e-135 485.0 318 79.6
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 6.8e-135 484.6 362 70.2
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.2e-134 483.8 301 80.1
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 1.2e-134 483.8 310 79.4
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.2e-134 483.8 333 73.9
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.2e-134 483.8 336 74.1
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 1.2e-134 483.8 362 70.2
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 2.6e-134 482.6 367 68.1
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 3.4e-134 482.3 327 75.5
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 5.7e-134 481.5 303 78.2
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 9.8e-134 480.7 303 78.2
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 9.8e-134 480.7 315 76.8
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 1.3e-133 480.3 317 75.7
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 2.2e-133 479.6 363 69.7
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.7e-133 478.8 306 79.1
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 4.9e-133 478.4 310 78.4
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 6.3e-133 478.0 349 69.9
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 6.3e-133 478.0 335 71.9
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 6.3e-133 478.0 303 78.2
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 6.3e-133 478.0 303 78.2
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.1e-132 477.2 337 73.6
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.1e-132 477.2 343 72.6
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 3.1e-132 475.7 323 74.0
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 3.1e-132 475.7 359 68.2
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 4.1e-132 475.3 297 78.8
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 1.2e-131 473.8 321 73.5
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 1.2e-131 473.8 365 68.2
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 2.7e-131 472.6 332 72.3
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 7.8e-131 471.1 357 68.6
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.0e-130 470.7 322 75.8
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 3.8e-130 468.8 326 72.4
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.5e-129 466.8 347 71.2
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.5e-129 466.1 296 78.7
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 7.3e-129 464.5 328 73.5
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 2.8e-128 462.6 300 77.3
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 1.2e-126 457.2 274 81.8
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 3.4e-126 455.7 284 79.2
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.6e-123 446.8 460 55.7
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.6e-123 446.8 302 74.2
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 4.6e-123 445.3 363 65.8
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 7.8e-123 444.5 513 52.2
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 7.3e-121 438.0 306 72.2
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 4.0e-119 432.2 266 79.7
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 4.9e-117 425.2 328 66.2
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.3e-113 412.5 307 66.4
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 3.6e-112 409.1 304 67.4
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 5.2e-111 405.2 292 72.6
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 2.4e-108 396.4 310 64.8
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.4e-108 395.2 289 67.8
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.6e-104 382.5 213 88.3
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 8.1e-104 381.3 462 49.4
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 8.6e-98 361.3 306 60.8
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.9e-92 343.6 209 83.3
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.1e-91 340.1 361 53.2
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 9.6e-89 331.3 199 81.9
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 9.3e-84 314.7 168 91.7
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 6.0e-83 312.0 317 52.1
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.5e-81 307.4 203 76.8
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 9.6e-81 304.7 247 67.2
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 9.6e-81 304.7 247 67.2
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.9e-77 292.4 194 76.8
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.1e-76 291.2 194 76.3
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 4.2e-76 289.3 163 87.7
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 1.3e-72 277.7 324 50.6
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.8e-71 273.9 167 81.4
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.5e-70 270.8 258 50.8
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.6e-70 270.0 189 75.7
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.3e-66 257.7 148 84.5
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 4.8e-64 249.2 186 68.3
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 8.5e-61 238.4 219 60.3
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 1.6e-59 234.2 144 78.5
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.5e-57 227.6 259 47.1
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.3e-56 224.6 141 76.6
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.2e-43 181.4 108 83.3
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 4.1e-39 166.4 94 79.8
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 4.0e-34 149.8 128 61.7
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 2.8e-32 143.7 241 36.9
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 2.0e-30 137.5 80 83.8
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.7e-22 110.5 260 32.3
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.3e-21 107.5 104 51.0
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 5.9e-14 82.8 48 77.1
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.8e-11 73.9 47 72.3
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 7.5e-09 65.9 71 47.9


User provided reference genes

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