Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 7.7e-270 933.3 505 100.0
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 1.1e-191 673.7 513 72.7
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 1.3e-187 660.2 486 73.7
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.1e-187 659.4 487 73.7
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 1.5e-185 653.3 520 70.6
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 1.5e-185 653.3 508 71.3
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.3e-181 640.2 492 71.7
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.8e-179 632.5 486 71.2
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 1.7e-176 623.2 514 69.1
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 5.0e-176 621.7 484 70.7
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 6.5e-176 621.3 500 68.6
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 8.4e-176 620.9 484 70.7
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 2.1e-174 616.3 492 71.3
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 2.7e-174 615.9 514 69.1
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 7.9e-174 614.4 488 70.3
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 2.3e-173 612.8 488 70.9
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.1e-172 610.5 381 88.5
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 2.5e-172 609.4 462 72.3
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 2.4e-170 602.8 473 72.5
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.5e-169 600.1 472 69.9
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 3.2e-167 592.4 513 65.9
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 3.6e-166 589.0 578 60.0
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 1.8e-165 586.6 466 70.8
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 3.9e-165 585.5 492 65.4
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 2.8e-163 579.3 492 67.5
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 3.7e-163 578.9 492 67.3
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 6.9e-162 574.7 478 68.6
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 1.2e-161 573.9 508 65.9
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.2e-161 573.9 509 63.3
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 1.5e-161 573.5 492 64.0
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 3.8e-160 568.9 496 64.3
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 5.0e-160 568.5 481 66.7
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 6.5e-160 568.2 493 67.1
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 3.2e-159 565.8 509 62.7
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 7.2e-159 564.7 500 63.8
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.6e-158 563.5 506 63.4
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 7.9e-158 561.2 511 63.0
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 7.9e-158 561.2 515 61.9
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 1.8e-157 560.1 499 62.5
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 8.8e-157 557.8 471 66.5
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 1.1e-156 557.4 491 65.8
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 2.2e-155 553.1 506 62.1
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 2.4e-154 549.7 481 63.4
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 3.1e-154 549.3 477 63.3
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 4.1e-154 548.9 516 60.7
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 2.0e-153 546.6 488 61.5
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.0e-153 546.6 513 62.8
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 4.5e-153 545.4 456 67.1
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 5.9e-153 545.0 493 64.5
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.7e-152 543.5 475 64.8
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 6.5e-152 541.6 473 64.5
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 1.1e-151 540.8 417 70.7
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 1.5e-151 540.4 473 64.1
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 9.4e-151 537.7 500 62.8
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.2e-150 537.3 484 62.6
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.4e-149 533.9 518 59.7
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.8e-149 533.5 524 59.2
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 8.8e-149 531.2 486 60.7
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 9.7e-148 527.7 486 61.3
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 1.8e-146 523.5 409 68.0
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 2.4e-146 523.1 504 58.5
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 9.1e-146 521.2 492 61.0
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 2.7e-145 519.6 508 60.6
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 2.7e-145 519.6 413 67.3
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 2.9e-144 516.2 497 61.2
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 2.9e-144 516.2 497 61.2
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 3.2e-143 512.7 505 59.4
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 5.5e-143 511.9 479 59.9
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 9.4e-143 511.1 431 64.5
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 1.2e-142 510.8 508 59.8
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.2e-142 510.8 504 59.5
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.6e-142 510.4 479 60.3
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 8.0e-142 508.1 507 59.2
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 2.3e-141 506.5 498 61.2
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 1.2e-140 504.2 517 58.8
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.5e-140 503.8 414 67.1
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 4.4e-140 502.3 472 58.9
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 9.8e-140 501.1 413 67.1
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 1.3e-139 500.7 500 58.2
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 4.8e-139 498.8 391 66.8
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 6.3e-139 498.4 503 58.4
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 8.3e-139 498.0 454 63.4
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.4e-138 496.5 495 60.8
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 9.1e-138 494.6 496 58.9
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 2.7e-137 493.0 499 58.5
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 3.5e-137 492.7 510 57.1
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 3.5e-137 492.7 510 57.1
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 3.5e-137 492.7 512 57.6
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 5.0e-136 488.8 507 58.0
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.9e-135 486.9 507 58.6
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 3.2e-135 486.1 511 58.3
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 7.2e-135 485.0 508 57.5
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.6e-134 483.8 476 59.9
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 8.0e-134 481.5 500 57.0
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 3.0e-133 479.6 419 62.8
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 1.5e-132 477.2 428 62.1
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 5.7e-132 475.3 485 57.7
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 1.7e-131 473.8 534 55.4
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 4.1e-130 469.2 483 57.6
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 7.7e-129 464.9 391 63.7
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 1.9e-127 460.3 508 56.5
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.6e-126 457.2 445 57.1
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 1.2e-124 451.1 407 60.4
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 4.4e-124 449.1 381 64.3
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 2.2e-123 446.8 404 62.9
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 3.9e-120 436.0 479 56.6
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 1.9e-119 433.7 401 62.3
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 1.6e-118 430.6 395 60.8
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 3.4e-116 422.9 390 59.7
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 9.8e-116 421.4 363 64.5
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 3.5e-113 412.9 366 65.3
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 3.4e-108 396.4 315 66.7
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 9.8e-108 394.8 519 47.8
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 1.9e-106 390.6 505 46.9
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 6.0e-97 359.0 495 43.8
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 8.1e-94 348.6 483 44.3
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 8.4e-91 338.6 284 65.5
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.1e-90 338.2 284 65.5
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 3.2e-90 336.7 290 59.3
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.2e-90 336.3 369 58.3
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 9.0e-85 318.5 328 58.8
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 4.5e-84 316.2 274 66.4
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 1.1e-82 311.6 501 43.1
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 5.8e-76 289.3 231 65.4
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 3.8e-75 286.6 307 54.4
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 2.4e-69 267.3 612 36.4
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.5e-68 263.1 324 55.6
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 2.5e-66 257.3 479 40.5
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.9e-58 231.1 177 69.5
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 9.1e-53 212.2 186 69.4
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.8e-48 198.0 163 63.8
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 1.9e-42 177.9 144 65.3
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 9.7e-39 165.6 159 58.5
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 2.0e-36 157.9 168 63.1
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 2.4e-29 134.4 178 49.4
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 7.7e-28 129.4 108 62.0
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 2.5e-26 124.4 108 61.1
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 2.5e-26 124.4 108 61.1
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 9.4e-26 122.5 126 52.4
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.6e-25 121.7 145 54.5
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 5.9e-20 103.2 196 40.3
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 4.0e-16 90.5 88 58.0
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 1.5e-15 88.6 108 52.8
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 5.7e-15 86.7 107 43.0
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 1.3e-14 85.5 113 54.0
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 2.8e-14 84.3 70 64.3
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.8e-13 81.6 154 40.9
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 9.2e-13 79.3 57 66.7
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.2e-12 79.0 75 58.7
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 1.0e-11 75.9 99 55.6
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 5.6e-10 70.1 68 55.9
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 1.2e-09 68.9 191 31.4
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 3.0e-08 64.3 129 39.5
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 8.9e-08 62.8 153 36.6
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.0e-07 61.6 148 36.5
CAN.G322.73 Capsicum annuum HOM05D004816 ORTHO05D006043 5.7e-07 60.1 66 62.1
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.2e-06 58.2 40 75.0


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