Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0802 Trochodendron aralioides HOM05D000003 ORTHO05D000126 4.4e-64 247.7 113 100.0
TAR319G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000126 7.8e-13 77.4 93 38.7
TAR127G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000126 1.6e-10 69.7 78 44.9
TAR648G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000126 1.4e-09 66.6 88 37.5
Atru.chr7.664 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-09 64.7 63 44.4
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.2e-08 63.5 91 34.1
QL01p000768 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-08 63.5 92 30.4
TAR084G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.2e-08 63.5 84 28.6
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 1.5e-08 63.2 90 27.8
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.0e-08 62.8 83 34.9
QL10p058267 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-08 62.8 92 29.3
QL09p054237 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-08 62.4 93 31.2
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 3.4e-08 62.0 98 33.7
Ah.07g198580 Amaranthus hybridus HOM05D000003 ORTHO05D000126 4.4e-08 61.6 93 31.2
QL01p055473 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-08 61.6 90 33.3
Sed0014562 Sechium edule HOM05D000003 ORTHO05D000126 4.4e-08 61.6 97 38.1
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.5e-08 60.8 97 33.0
Oeu036667.1 Olea europaea HOM05D000003 ORTHO05D000126 7.5e-08 60.8 89 32.6
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-08 60.8 88 36.4
Atru.chr9.617 Acer truncatum HOM05D000003 ORTHO05D000126 9.9e-08 60.5 91 31.9
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 9.9e-08 60.5 88 30.7
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 1.3e-07 60.1 100 32.0
Ah.02g119590 Amaranthus hybridus HOM05D000003 ORTHO05D000126 1.3e-07 60.1 91 30.8
TWI23G1165 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.3e-07 60.1 98 29.6
Atru.chr5.1805 Acer truncatum HOM05D000003 ORTHO05D000126 2.2e-07 59.3 83 34.9
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-07 59.3 101 30.7
Atru.chr4.156 Acer truncatum HOM05D000003 ORTHO05D000126 2.9e-07 58.9 61 42.6
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.9e-07 58.9 88 30.7
Sed0003755 Sechium edule HOM05D000003 ORTHO05D000126 2.9e-07 58.9 92 35.9
Sed0019411 Sechium edule HOM05D000003 ORTHO05D000126 2.9e-07 58.9 92 35.9
Atru.chr6.888 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-07 58.5 90 32.2
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.7e-07 58.5 98 32.7
TPR.G21894 Trifolium pratense HOM05D000003 ORTHO05D000126 3.7e-07 58.5 84 36.9
Atru.chr1.1650 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-07 58.2 90 32.2
AUR62022172 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.9e-07 58.2 107 28.0
QL08p037895 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-07 58.2 91 30.8
Ah.06g186870 Amaranthus hybridus HOM05D000003 ORTHO05D000126 6.4e-07 57.8 77 36.4
AUR62011319 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.4e-07 57.8 110 34.5
Haze_05455 Corylus avellana HOM05D000003 ORTHO05D000126 6.4e-07 57.8 97 32.0
Prupe.7G053200 Prunus persica HOM05D000003 ORTHO05D000126 6.4e-07 57.8 88 31.8
Atru.chr10.526 Acer truncatum HOM05D000003 ORTHO05D000126 8.3e-07 57.4 84 36.9
Atru.chr4.1290 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-07 57.4 61 42.6
CSS0004935 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.3e-07 57.4 86 31.4
CSS0016982 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.3e-07 57.4 86 31.4
Sed0006589 Sechium edule HOM05D000003 ORTHO05D000126 8.3e-07 57.4 89 40.4
Atru.chr1.2555 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-06 57.0 90 34.4
Atru.chr4.3089 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-06 57.0 90 34.4
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-06 57.0 102 33.3
Atru.chr11.1735 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-06 56.6 63 41.3
Atru.chr13.1808 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 56.6 92 34.8
Haze_10712 Corylus avellana HOM05D000003 ORTHO05D000126 1.4e-06 56.6 97 30.9
AUR62001732 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.9e-06 56.2 107 28.0
Prupe.7G053800 Prunus persica HOM05D000003 ORTHO05D000126 1.9e-06 56.2 93 30.1
QL02p054646 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 56.2 91 29.7
QL05p001179 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 56.2 103 34.0
QL10p031737 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 56.2 91 29.7
TWI31G0464 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.9e-06 56.2 89 30.3
Atru.chr13.2021 Acer truncatum HOM05D000003 ORTHO05D000126 2.4e-06 55.8 82 32.9
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.4e-06 55.8 82 30.5
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 2.4e-06 55.8 95 28.4
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-06 55.8 106 28.3
QL08p035099 Quercus lobata HOM05D000003 ORTHO05D000126 2.4e-06 55.8 88 30.7
Atru.chr4.689 Acer truncatum HOM05D000003 ORTHO05D000126 3.2e-06 55.5 90 33.3
Ah.11g044740 Amaranthus hybridus HOM05D000003 ORTHO05D000126 3.2e-06 55.5 79 31.6
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-06 55.5 101 26.7
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 3.2e-06 55.5 106 29.2
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 4.1e-06 55.1 82 31.7
Atru.chr7.810 Acer truncatum HOM05D000003 ORTHO05D000126 4.1e-06 55.1 90 34.4
Oeu000328.1 Olea europaea HOM05D000003 ORTHO05D000126 4.1e-06 55.1 82 32.9
QL04p062130 Quercus lobata HOM05D000003 ORTHO05D000126 4.1e-06 55.1 76 38.2
Dinv18185 Davidia involucrata HOM05D000003 ORTHO05D000126 5.4e-06 54.7 83 33.7
Lj2P989T21 Lonicera japonica HOM05D000003 ORTHO05D000126 5.4e-06 54.7 88 33.0
Lj9C38T11 Lonicera japonica HOM05D000003 ORTHO05D000126 5.4e-06 54.7 88 33.0
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.4e-06 54.7 91 31.9
Atru.chr11.971 Acer truncatum HOM05D000003 ORTHO05D000126 7.1e-06 54.3 88 33.0
Ah.04g154790 Amaranthus hybridus HOM05D000003 ORTHO05D000126 7.1e-06 54.3 66 36.4
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 7.1e-06 54.3 80 35.0
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 9.2e-06 53.9 84 32.1
AUR62008807 Chenopodium quinoa HOM05D000003 ORTHO05D000126 9.2e-06 53.9 107 29.9
AUR62040080 Chenopodium quinoa HOM05D000003 ORTHO05D000126 9.2e-06 53.9 100 31.0
ClCG04G003590 Citrullus lanatus HOM05D000003 ORTHO05D000126 9.2e-06 53.9 89 33.7
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 9.2e-06 53.9 102 28.4
Sed0012633 Sechium edule HOM05D000003 ORTHO05D000126 9.2e-06 53.9 102 29.4


User provided reference genes

Program Settings