Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0795 Trochodendron aralioides HOM05D004574 ORTHO05D005612 1.7e-205 719.2 384 100.0
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 7.5e-92 341.7 384 53.1
Dinv42911 Davidia involucrata HOM05D004574 ORTHO05D005612 4.2e-66 256.1 389 47.0
Dinv43190 Davidia involucrata HOM05D004574 ORTHO05D005612 4.2e-66 256.1 389 47.0
Duzib168G1873 Durio zibethinus HOM05D004574 ORTHO05D005612 2.1e-65 253.8 363 48.5
CSS0003558 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 7.8e-65 251.9 392 46.9
CSS0049430 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 5.1e-64 249.2 392 46.7
Manes.14G139500 Manihot esculenta HOM05D004574 ORTHO05D005612 8.7e-64 248.4 370 46.2
CiPaw.16G117400 Carya illinoinensis HOM05D004574 ORTHO05D005612 1.6e-62 244.2 367 46.9
Prupe.7G253700 Prunus persica HOM05D004574 ORTHO05D005612 1.6e-62 244.2 374 47.6
Ciclev10007567m.g Citrus clementina HOM05D004574 ORTHO05D005612 2.1e-62 243.8 363 46.0
Duzib187G1624 Durio zibethinus HOM05D004574 ORTHO05D005612 2.1e-62 243.8 364 47.0
Haze_19313 Corylus avellana HOM05D004574 ORTHO05D005612 6.2e-62 242.3 365 44.9
Nn8g39728 Nelumbo nucifera HOM05D004574 ORTHO05D005612 6.2e-62 242.3 385 45.2
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 1.1e-61 241.5 398 43.5
Aqoxy7G03519 Aquilegia oxysepala HOM05D004574 ORTHO05D005612 1.8e-61 240.7 400 44.2
GSVIVG01012900001 Vitis vinifera HOM05D004574 ORTHO05D005612 6.9e-61 238.8 386 45.1
Sed0008757 Sechium edule HOM05D004574 ORTHO05D005612 2.0e-60 237.3 391 45.5
TWI34G0786 Tripterygium wilfordii HOM05D004574 ORTHO05D005612 2.6e-60 236.9 409 44.3
Atru.chr7.229_Atru.chr7.228 Acer truncatum HOM05D004574 ORTHO05D005612 3.4e-60 236.5 382 44.8
Cfa020884 Carpinus fangiana HOM05D004574 ORTHO05D005612 2.2e-59 233.8 367 44.1
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 4.9e-59 232.6 379 45.6
Thecc.09G142400 Theobroma cacao HOM05D004574 ORTHO05D005612 1.9e-58 230.7 368 46.5
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.4e-58 230.3 384 43.0
Gohir.A06G049000 Gossypium hirsutum HOM05D004574 ORTHO05D005612 7.1e-58 228.8 370 47.0
RcHm_v2.0_Chr2g0086551 Rosa chinensis HOM05D004574 ORTHO05D005612 1.2e-57 228.0 368 45.4
FAN28G2389 Fragaria x ananassa HOM05D004574 ORTHO05D005612 1.0e-56 224.9 368 44.3
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 5.1e-56 222.6 370 44.1
ClCG06G012070 Citrullus lanatus HOM05D004574 ORTHO05D005612 6.7e-56 222.2 406 42.4
Gohir.D06G048700 Gossypium hirsutum HOM05D004574 ORTHO05D005612 6.7e-56 222.2 372 45.4
FvH4_1g01590 Fragaria vesca HOM05D004574 ORTHO05D005612 1.1e-55 221.5 373 44.2
FAN26G2227 Fragaria x ananassa HOM05D004574 ORTHO05D005612 2.5e-55 220.3 370 44.3
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 4.3e-55 219.5 390 41.3
MELO3C010260.2 Cucumis melo HOM05D004574 ORTHO05D005612 7.4e-55 218.8 407 41.8
Gorai.010G054900 Gossypium raimondii HOM05D004574 ORTHO05D005612 7.4e-55 218.8 382 44.5
Potri.006G189501 Populus trichocarpa HOM05D004574 ORTHO05D005612 1.3e-54 218.0 365 44.1
Cpa.g.sc46.91 Carica papaya HOM05D004574 ORTHO05D005612 1.1e-53 214.9 379 42.5
Sed0022583 Sechium edule HOM05D004574 ORTHO05D005612 2.4e-53 213.8 392 41.3
Lj4g0023014 Lotus japonicus HOM05D004574 ORTHO05D005612 3.1e-53 213.4 410 41.7
Potri.018G113600 Populus trichocarpa HOM05D004574 ORTHO05D005612 4.0e-53 213.0 361 41.0
Lalb_Chr07g0179541 Lupinus albus HOM05D004574 ORTHO05D005612 5.3e-53 212.6 385 42.1
COL.COLO4_24086 Corchorus olitorius HOM05D004574 ORTHO05D005612 2.6e-52 210.3 341 46.3
Lalb_Chr12g0198521 Lupinus albus HOM05D004574 ORTHO05D005612 2.9e-51 206.8 388 41.8
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 3.8e-51 206.5 388 41.5
Medtr4g116570 Medicago truncatula HOM05D004574 ORTHO05D005612 8.4e-51 205.3 400 40.5
TPR.G15786 Trifolium pratense HOM05D004574 ORTHO05D005612 1.9e-50 204.1 402 42.5
MBI14_g15649_MAGBIO Magnolia biondii HOM05D004574 ORTHO05D005612 2.4e-50 203.8 387 42.6
Sabra18G0096500 Salix brachista HOM05D004574 ORTHO05D005612 9.3e-50 201.8 363 43.0
FAN19G2203 Fragaria x ananassa HOM05D004574 ORTHO05D005612 3.5e-49 199.9 412 39.8
PGR102G2914 Punica granatum HOM05D004574 ORTHO05D005612 6.0e-49 199.1 366 40.4
THA.LOC104815398 Tarenaya hassleriana HOM05D004574 ORTHO05D005612 7.9e-49 198.7 373 42.1
Hma1.2p1_0182F.1_g080580 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 5.1e-48 196.1 343 41.1
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 1.5e-47 194.5 328 44.5
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 1.6e-46 191.0 285 44.9
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 2.1e-46 190.7 396 38.6
AT3G09850 Arabidopsis thaliana HOM05D004574 ORTHO05D005612 5.3e-45 186.0 367 41.1
CsaV3_1G028540 Cucumis sativus L. HOM05D004574 ORTHO05D005612 5.3e-45 186.0 417 38.4
Eucgr.C04065 Eucalyptus grandis HOM05D004574 ORTHO05D005612 4.5e-44 183.0 379 39.1
QL02p091406 Quercus lobata HOM05D004574 ORTHO05D005612 4.5e-44 183.0 380 39.2
FAN23G1466 Fragaria x ananassa HOM05D004574 ORTHO05D005612 1.3e-43 181.4 370 40.8
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 1.7e-43 181.0 370 39.2
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 2.9e-43 180.3 368 38.3
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 2.9e-43 180.3 340 39.7
vmacro21880 Vaccinium macrocarpon HOM05D004574 ORTHO05D005612 4.9e-43 179.5 388 38.9
Hma1.2p1_2402F.1_g321400 Hydrangea macrophylla HOM05D004574 ORTHO05D005612 1.1e-42 178.3 359 39.8
AL3G21080 Arabidopsis lyrata HOM05D004574 ORTHO05D005612 5.5e-42 176.0 368 39.7
Migut.J01279 Erythranthe guttata HOM05D004574 ORTHO05D005612 1.6e-41 174.5 400 37.5
Sc18g0000060 Simmondsia chinensis HOM05D004574 ORTHO05D005612 7.9e-41 172.2 369 38.8
Ca_21611_v3 Cicer arietinum L. HOM05D004574 ORTHO05D005612 7.4e-39 165.6 318 41.2
Thhalv10020109m.g Eutrema salsugineum HOM05D004574 ORTHO05D005612 3.7e-38 163.3 372 37.1
Cc06_g07390 Coffea canephora HOM05D004574 ORTHO05D005612 4.1e-37 159.8 400 34.0
Hund14397 Selenicereus undatus HOM05D004574 ORTHO05D005612 9.0e-37 158.7 420 33.8
Psat4g033240 Pisum sativum HOM05D004574 ORTHO05D005612 1.2e-36 158.3 270 43.7
CARHR084360 Cardamine hirsuta HOM05D004574 ORTHO05D005612 2.6e-36 157.1 394 36.3
Carub.0003s0894 Capsella rubella HOM05D004574 ORTHO05D005612 7.6e-36 155.6 370 38.1
Sp3g08180 Schrenkiella parvula HOM05D004574 ORTHO05D005612 7.6e-36 155.6 361 36.8
PSO170G6219 Papaver somniferum HOM05D004574 ORTHO05D005612 1.0e-35 155.2 433 35.3
CAN.G518.8 Capsicum annuum HOM05D004574 ORTHO05D005612 1.3e-35 154.8 416 36.5
MSTRG.19628 Avicennia marina HOM05D004574 ORTHO05D005612 2.2e-35 154.1 397 37.3
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 1.9e-34 151.0 284 36.6
VMungo1215G1939 Vigna mungo HOM05D004574 ORTHO05D005612 1.9e-34 151.0 404 34.4
Phvul.003G175300 Phaseolus vulgaris HOM05D004574 ORTHO05D005612 2.1e-33 147.5 384 34.6
BcaC05g29496 Brassica carinata HOM05D004574 ORTHO05D005612 1.8e-32 144.4 339 37.8
C05p58250 Brassica napus HOM05D004574 ORTHO05D005612 1.8e-32 144.4 339 37.8
ECA236G2347 Erigeron canadensis HOM05D004574 ORTHO05D005612 3.3e-31 140.2 413 35.6
BolC5t34479H Brassica oleracea HOM05D004574 ORTHO05D005612 7.4e-31 139.0 344 36.6
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 9.7e-31 138.7 396 32.8
Nitab4.5_0001151g0100 Nicotiana tabacum HOM05D004574 ORTHO05D005612 2.4e-29 134.0 416 33.2
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 1.2e-28 131.7 278 37.4
Eucgr.L01317 Eucalyptus grandis HOM05D004574 ORTHO05D005612 4.5e-28 129.8 279 37.6
Lsat_1_v5_gn_8_60221 Lactuca sativa HOM05D004574 ORTHO05D005612 5.9e-28 129.4 375 33.6
SGA_v2.0_scaffold229G43349 Striga asiatica HOM05D004574 ORTHO05D005612 1.4e-26 124.8 398 31.4
BraA05t22709Z Brassica rapa HOM05D004574 ORTHO05D005612 1.9e-26 124.4 341 34.6
Sopen07g003110 Solanum pennellii HOM05D004574 ORTHO05D005612 4.2e-26 123.2 416 33.7
AUR62011249 Chenopodium quinoa HOM05D004574 ORTHO05D005612 5.5e-26 122.9 418 31.6
BcaC05g29707 Brassica carinata HOM05D004574 ORTHO05D005612 1.6e-25 121.3 313 36.4
Ah.09g223910 Amaranthus hybridus HOM05D004574 ORTHO05D005612 2.1e-25 120.9 449 28.7
Aa31LG3G2320 Aethionema arabicum HOM05D004574 ORTHO05D005612 2.7e-25 120.6 403 33.3
SHI03239 Sapria himalayana HOM05D004574 ORTHO05D005612 6.1e-25 119.4 262 35.9
EL10Ac8g18810 Beta vulgaris HOM05D004574 ORTHO05D005612 8.8e-24 115.5 425 30.1
A05p39200 Brassica napus HOM05D004574 ORTHO05D005612 1.1e-23 115.2 341 34.0
HanXRQChr05g0139651 Helianthus annuus HOM05D004574 ORTHO05D005612 3.3e-23 113.6 258 37.2
CDE05G2637 Ceratophyllum demersum HOM05D004574 ORTHO05D005612 7.4e-23 112.5 329 31.6
AUR62041455 Chenopodium quinoa HOM05D004574 ORTHO05D005612 7.4e-23 112.5 394 32.0
Peaxi162Scf00347g00125 Petunia axillaris HOM05D004574 ORTHO05D005612 9.7e-23 112.1 413 32.7
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 2.8e-22 110.5 359 33.7
Eucgr.L02934 Eucalyptus grandis HOM05D004574 ORTHO05D005612 4.8e-22 109.8 278 36.0
Solyc07g007040.4 Solanum lycopersicum HOM05D004574 ORTHO05D005612 4.8e-22 109.8 408 32.1
Phvul.003G175200 Phaseolus vulgaris HOM05D004574 ORTHO05D005612 4.1e-21 106.7 233 37.3
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 2.3e-16 90.9 367 31.6
ATR0629G131 Amborella trichopoda HOM05D004574 ORTHO05D005612 4.4e-15 86.7 419 27.7
DCAR_014931 Daucus carota HOM05D004574 ORTHO05D005612 9.1e-13 79.0 278 32.4
Zm00001eb028250 Zea mays HOM05D004574 ORTHO05D005612 2.9e-11 73.9 287 30.3
SEGI_00197 Sequoiadendron giganteum HOM05D000238 ORTHO05D001889 8.0e-09 65.9 269 30.9
SEGI_33529 Sequoiadendron giganteum HOM05D004574 ORTHO05D005612 8.0e-09 65.9 389 29.0
Actinidia38356 Actinidia chinensis HOM05D004574 ORTHO05D005612 6.7e-08 62.8 91 48.4
unitig_0.g517 Utricularia gibba HOM05D004574 ORTHO05D005612 2.0e-07 61.2 206 31.6
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 8.2e-06 55.8 404 27.2


User provided reference genes

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