Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 8.4e-67 256.9 132 100.0
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.3e-40 169.9 134 70.9
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 9.0e-37 157.1 153 61.4
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 1.6e-33 146.4 118 67.8
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.7e-33 145.6 122 68.0
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 4.6e-33 144.8 123 68.3
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 7.9e-33 144.1 122 66.4
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.3e-32 143.3 144 61.1
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.7e-30 136.3 127 64.6
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 2.2e-30 136.0 130 62.3
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 8.2e-30 134.0 131 58.8
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.1e-29 131.7 142 57.0
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 4.1e-29 131.7 142 56.3
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 1.2e-28 130.2 130 60.8
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 1.2e-28 130.2 130 60.8
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.4e-28 128.6 142 55.6
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 5.9e-28 127.9 109 64.2
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 1.3e-27 126.7 127 61.4
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 2.9e-27 125.6 121 60.3
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 6.5e-27 124.4 113 61.1
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 8.5e-27 124.0 150 48.7
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 1.1e-26 123.6 129 56.6
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 1.4e-26 123.2 111 63.1
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 3.2e-26 122.1 111 64.0
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.2e-26 121.7 111 58.6
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 4.2e-26 121.7 111 58.6
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 5.5e-26 121.3 86 74.4
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 5.5e-26 121.3 111 58.6
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 9.4e-26 120.6 119 59.7
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.6e-25 119.8 114 62.3
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 1.6e-25 119.8 84 72.6
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.0e-24 117.1 124 57.3
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 5.1e-24 114.8 86 70.9
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 6.7e-24 114.4 111 57.7
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 6.7e-24 114.4 111 57.7
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 6.7e-24 114.4 110 61.8
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 2.6e-23 112.5 108 57.4
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 4.4e-23 111.7 88 69.3
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 5.7e-23 111.3 88 67.0
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.4e-23 110.9 88 69.3
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 7.4e-23 110.9 137 50.4
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 1.7e-22 109.8 87 67.8
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 2.8e-22 109.0 90 67.8
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 3.7e-22 108.6 111 58.6
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 4.8e-22 108.2 90 62.2
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.4e-21 106.7 88 67.0
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 2.4e-21 105.9 90 65.6
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 4.1e-21 105.1 128 50.0
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 5.3e-21 104.8 85 65.9
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 5.3e-21 104.8 85 65.9
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 5.3e-21 104.8 131 53.4
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 3.4e-20 102.1 90 62.2
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 1.7e-19 99.8 114 56.1
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 2.9e-19 99.0 92 60.9
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 6.5e-19 97.8 128 47.7
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 8.5e-19 97.4 157 44.6
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 1.4e-18 96.7 78 66.7
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.4e-18 96.7 129 48.8
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 2.5e-18 95.9 83 60.2
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 3.2e-18 95.5 87 59.8
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 5.5e-18 94.7 94 57.4
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 7.2e-18 94.4 123 47.2
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 9.4e-18 94.0 110 50.0
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 1.2e-17 93.6 76 64.5
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 2.1e-17 92.8 106 49.1
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.7e-17 92.4 118 46.6
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 1.4e-16 90.1 65 72.3
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 3.9e-16 88.6 93 54.8
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 3.9e-16 88.6 93 54.8
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 3.9e-16 88.6 93 54.8
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 3.9e-16 88.6 93 54.8
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 3.9e-16 88.6 93 55.9
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 5.2e-16 88.2 93 54.8
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 6.7e-16 87.8 88 56.8
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 2.6e-15 85.9 79 59.5
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 4.4e-15 85.1 75 64.0
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 4.4e-15 85.1 83 55.4
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 4.8e-14 81.6 73 64.4
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 6.3e-14 81.3 89 52.8
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 1.8e-13 79.7 79 58.2
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 2.4e-13 79.3 103 50.5
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 9.1e-13 77.4 80 52.5
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 5.9e-12 74.7 75 53.3
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 1.0e-11 73.9 76 53.9
ATR0627G001 Amborella trichopoda HOM05D007355 ORTHO05D009343 1.7e-11 73.2 107 48.6
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 3.8e-11 72.0 78 51.3
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 1.5e-10 70.1 70 52.9
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 1.5e-10 70.1 72 54.2
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 2.5e-10 69.3 94 45.7
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.5e-10 69.3 84 52.4
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 3.2e-10 68.9 78 52.6
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 4.2e-10 68.6 74 58.1
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 5.5e-10 68.2 82 50.0
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 9.4e-10 67.4 75 57.3
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 9.4e-10 67.4 75 57.3
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.2e-09 67.0 72 55.6
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.2e-09 67.0 72 55.6
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.6e-09 66.6 78 52.6
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.7e-09 65.9 76 50.0
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 4.7e-09 65.1 71 49.3
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.7e-09 65.1 71 57.7
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 2.3e-08 62.8 81 45.7
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 5.2e-08 61.6 81 45.7
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 5.2e-08 61.6 81 45.7


User provided reference genes

Program Settings