Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 7.2e-39 163.3 75 100.0
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 8.2e-19 96.7 45 97.8
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 8.2e-19 96.7 45 97.8
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 8.2e-19 96.7 45 97.8
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 8.2e-19 96.7 45 97.8
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 8.2e-19 96.7 45 97.8
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 8.2e-19 96.7 45 97.8
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 1.1e-18 96.3 45 95.6
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 1.8e-18 95.5 45 95.6
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 1.8e-18 95.5 45 95.6
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 2.4e-18 95.1 45 93.3
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 3.1e-18 94.7 45 91.1
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 3.1e-18 94.7 45 91.1
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 4.1e-18 94.4 45 93.3
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 5.3e-18 94.0 45 91.1
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 5.3e-18 94.0 45 91.1
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 5.3e-18 94.0 45 91.1
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 5.3e-18 94.0 45 93.3
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 5.3e-18 94.0 45 91.1
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 5.3e-18 94.0 45 91.1
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 7.0e-18 93.6 45 93.3
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 7.0e-18 93.6 45 91.1
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 7.0e-18 93.6 45 93.3
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 9.1e-18 93.2 45 91.1
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 9.1e-18 93.2 45 91.1
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 9.1e-18 93.2 45 91.1
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 9.1e-18 93.2 45 91.1
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 9.1e-18 93.2 45 91.1
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 1.2e-17 92.8 45 91.1
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 1.2e-17 92.8 45 91.1
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 1.2e-17 92.8 45 93.3
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 1.2e-17 92.8 45 93.3
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 1.2e-17 92.8 45 93.3
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 1.6e-17 92.4 45 91.1
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 1.6e-17 92.4 45 93.3
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 1.6e-17 92.4 45 93.3
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 1.6e-17 92.4 45 93.3
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.6e-17 92.4 45 91.1
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.6e-17 92.4 45 93.3
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.6e-17 92.4 45 93.3
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 2.0e-17 92.0 45 88.9
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 2.0e-17 92.0 45 91.1
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 2.0e-17 92.0 46 95.7
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 2.6e-17 91.7 44 88.6
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 2.6e-17 91.7 45 88.9
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 3.5e-17 91.3 45 88.9
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 3.5e-17 91.3 45 88.9
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 3.5e-17 91.3 45 91.1
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 3.5e-17 91.3 45 91.1
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 3.5e-17 91.3 45 91.1
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 3.5e-17 91.3 45 91.1
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 4.5e-17 90.9 45 88.9
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 93.3
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 93.3
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 93.3
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 93.3
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 93.3
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 93.3
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 86.7
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 86.7
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 88.9
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 5.9e-17 90.5 45 93.3
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 7.7e-17 90.1 45 91.1
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 7.7e-17 90.1 45 88.9
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 1.0e-16 89.7 45 88.9
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 1.0e-16 89.7 45 88.9
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 1.0e-16 89.7 45 91.1
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 1.0e-16 89.7 45 88.9
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 1.0e-16 89.7 45 88.9
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 1.3e-16 89.4 45 86.7
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 1.3e-16 89.4 45 91.1
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 1.7e-16 89.0 43 90.7
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 2.2e-16 88.6 45 88.9
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 2.2e-16 88.6 45 88.9
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 2.2e-16 88.6 45 88.9
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 2.9e-16 88.2 45 88.9
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 2.9e-16 88.2 45 91.1
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 2.9e-16 88.2 45 91.1
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 2.9e-16 88.2 45 91.1
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 2.9e-16 88.2 45 91.1
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 2.9e-16 88.2 45 91.1
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 2.9e-16 88.2 45 86.7
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 3.8e-16 87.8 45 88.9
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 5.0e-16 87.4 45 88.9
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 5.0e-16 87.4 45 84.4
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 5.0e-16 87.4 45 86.7
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 6.5e-16 87.0 45 86.7
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 6.5e-16 87.0 45 84.4
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 8.5e-16 86.7 45 84.4
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 1.1e-15 86.3 45 84.4
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 1.9e-15 85.5 45 86.7
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 2.5e-15 85.1 45 88.9
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 4.2e-15 84.3 45 84.4
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 5.5e-15 84.0 45 84.4
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 7.2e-15 83.6 45 84.4
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 1.6e-14 82.4 45 82.2
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 2.1e-14 82.0 45 84.4
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 4.7e-14 80.9 45 75.6
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 8.0e-14 80.1 45 82.2
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 1.8e-13 79.0 45 75.6
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 1.8e-13 79.0 45 80.0
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 2.3e-13 78.6 45 82.2
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 2.3e-13 78.6 45 82.2
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 5.2e-13 77.4 44 79.5
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 5.2e-13 77.4 44 79.5
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 6.8e-13 77.0 44 75.0
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 3.4e-12 74.7 45 73.3
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 3.4e-12 74.7 45 73.3
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 7.5e-12 73.6 45 75.6
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 7.5e-12 73.6 45 75.6
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 1.3e-11 72.8 45 75.6
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.3e-11 72.8 45 75.6
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.3e-11 72.8 45 75.6
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 1.3e-11 72.8 45 73.3
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 2.8e-11 71.6 45 71.1
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.7e-11 71.2 34 91.2
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.7e-11 71.2 34 91.2
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 3.7e-11 71.2 45 71.1
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 3.7e-11 71.2 45 71.1
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.1e-10 69.7 34 88.2
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 1.8e-10 68.9 45 73.3
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 2.4e-10 68.6 44 65.9
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 5.3e-10 67.4 45 71.1
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 7.0e-10 67.0 32 87.5
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 2.0e-09 65.5 45 68.9
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 5.9e-09 63.9 45 62.2
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 2.9e-08 61.6 31 90.3
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 2.9e-08 61.6 31 90.3
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.5e-07 59.3 44 59.1
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 2.1e-06 55.5 25 100.0


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