Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.2e-85 318.9 163 100.0
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 3.4e-62 241.9 140 90.0
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 1.2e-43 180.3 146 70.5
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.1e-43 179.5 146 70.5
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 3.7e-40 168.7 145 66.2
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 3.7e-40 168.7 143 64.3
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 2.7e-38 162.5 144 64.6
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 3.5e-38 162.2 145 66.2
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 4.5e-38 161.8 145 64.8
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 1.1e-36 157.1 141 61.7
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.9e-36 156.4 140 66.4
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 5.5e-36 154.8 140 64.3
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.1e-35 152.9 155 61.9
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 4.7e-35 151.8 140 65.0
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 4.7e-35 151.8 140 60.0
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 6.1e-35 151.4 140 62.1
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 8.0e-35 151.0 145 59.3
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 1.0e-34 150.6 147 59.9
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.4e-34 150.2 136 65.4
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.4e-34 150.2 155 60.6
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 1.8e-34 149.8 145 58.6
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 2.3e-34 149.4 140 62.9
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 4.0e-34 148.7 139 60.4
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 4.0e-34 148.7 149 61.7
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 6.8e-34 147.9 144 59.7
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.5e-33 146.7 144 63.2
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 2.0e-33 146.4 148 58.1
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.4e-33 145.6 136 64.0
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 4.4e-33 145.2 144 61.1
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 5.7e-33 144.8 143 62.2
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 7.5e-33 144.4 144 57.6
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 9.8e-33 144.1 143 58.0
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 2.8e-32 142.5 142 59.9
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 2.8e-32 142.5 147 57.1
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 2.8e-32 142.5 145 59.3
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 3.7e-32 142.1 142 62.7
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 6.3e-32 141.4 147 55.1
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 1.4e-31 140.2 139 59.0
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 1.4e-31 140.2 145 58.6
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 1.8e-31 139.8 145 60.0
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 2.4e-31 139.4 147 56.5
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 7.0e-31 137.9 145 57.9
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 2.0e-30 136.3 147 53.1
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 3.5e-30 135.6 148 53.4
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 5.9e-30 134.8 141 57.4
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 7.7e-30 134.4 146 54.1
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 1.3e-29 133.7 149 55.7
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 3.8e-29 132.1 146 53.4
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.1e-28 130.6 141 53.9
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 2.5e-28 129.4 151 56.3
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 4.2e-28 128.6 157 53.5
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.2e-27 127.1 145 57.2
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 2.8e-27 125.9 140 57.1
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 3.6e-27 125.6 143 54.5
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 6.1e-27 124.8 135 57.0
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 8.0e-27 124.4 145 53.1
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 2.3e-26 122.9 156 56.4
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 3.0e-26 122.5 139 49.6
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 4.0e-26 122.1 156 55.8
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 6.8e-26 121.3 139 57.6
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 6.8e-26 121.3 146 52.1
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 1.2e-25 120.6 138 52.2
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.2e-25 120.6 138 53.6
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 2.0e-25 119.8 153 51.0
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 2.6e-25 119.4 122 57.4
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 4.4e-25 118.6 138 51.4
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 4.4e-25 118.6 138 51.4
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 4.4e-25 118.6 139 55.4
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 7.5e-25 117.9 146 53.4
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 1.3e-24 117.1 138 52.9
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 1.3e-24 117.1 140 48.6
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.2e-24 116.3 138 50.7
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 3.7e-24 115.5 140 54.3
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 4.9e-24 115.2 138 51.4
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 6.3e-24 114.8 138 51.4
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 1.8e-23 113.2 145 52.4
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 2.4e-23 112.8 145 49.7
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 4.1e-23 112.1 140 50.7
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 5.4e-23 111.7 144 51.4
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 5.4e-23 111.7 144 51.4
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 2.7e-22 109.4 138 52.9
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 2.7e-22 109.4 146 45.2
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 2.7e-22 109.4 138 52.2
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 1.0e-21 107.5 139 52.5
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 1.3e-21 107.1 140 52.1
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 2.3e-21 106.3 140 52.9
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.3e-21 106.3 138 50.0
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.3e-21 106.3 138 50.0
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 3.9e-21 105.5 139 51.1
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 6.6e-21 104.8 139 51.1
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 6.6e-21 104.8 139 51.1
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 6.6e-21 104.8 140 50.7
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 1.9e-20 103.2 140 51.4
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 3.3e-20 102.4 140 52.1
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 3.3e-20 102.4 140 50.0
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 4.3e-20 102.1 140 50.0
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 7.3e-20 101.3 139 49.6
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 7.3e-20 101.3 131 49.6
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 9.5e-20 100.9 140 49.3
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 9.5e-20 100.9 140 49.3
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 9.5e-20 100.9 140 49.3
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 4.7e-19 98.6 140 50.0
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 6.1e-19 98.2 144 46.5
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 8.0e-19 97.8 137 50.4
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 1.0e-18 97.4 138 44.9
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 2.3e-18 96.3 153 45.8
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 3.1e-18 95.9 140 45.0
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 4.0e-18 95.5 160 44.4
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 6.8e-18 94.7 140 50.0
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 6.8e-18 94.7 147 44.9
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 2.6e-17 92.8 140 48.6
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 7.5e-17 91.3 108 54.6
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 7.5e-17 91.3 108 54.6
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 9.8e-17 90.9 160 43.1
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 1.7e-16 90.1 146 47.9
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 1.7e-16 90.1 138 44.2
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 2.9e-16 89.4 146 46.6
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.9e-15 86.7 138 44.9
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 4.1e-15 85.5 138 44.2
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 9.2e-15 84.3 147 42.2
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 2.7e-14 82.8 146 43.2
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 4.6e-14 82.0 139 41.0
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 3.0e-13 79.3 126 45.2
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 8.9e-10 67.8 138 40.6
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 2.2e-08 63.2 48 68.8
Gorai.011G083100 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.4e-07 59.7 103 39.8
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 9.2e-07 57.8 187 31.0


User provided reference genes

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