Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 8.1e-63 243.4 111 100.0
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 2.1e-47 192.2 113 78.8
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 3.0e-41 171.8 110 70.9
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 3.9e-41 171.4 104 76.0
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 1.5e-40 169.5 116 69.0
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 6.2e-39 164.1 115 65.2
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 1.1e-38 163.3 108 67.6
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.8e-38 162.5 108 67.6
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 7.6e-37 157.1 108 66.7
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 2.2e-36 155.6 109 64.2
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 2.2e-36 155.6 90 72.2
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 2.2e-36 155.6 120 62.5
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 2.9e-36 155.2 105 65.7
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 8.4e-36 153.7 108 63.9
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 3.2e-35 151.8 114 64.9
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 4.2e-35 151.4 92 71.7
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 7.1e-35 150.6 122 57.4
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 7.1e-35 150.6 97 71.1
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 9.3e-35 150.2 116 62.9
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 1.6e-34 149.4 115 59.1
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 2.7e-34 148.7 109 62.4
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 6.0e-34 147.5 122 57.4
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 2.3e-33 145.6 115 57.4
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 3.0e-33 145.2 65 92.3
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 3.9e-33 144.8 120 56.7
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 5.1e-33 144.4 109 58.7
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 2.5e-32 142.1 92 66.3
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 3.3e-32 141.7 99 61.6
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 4.3e-32 141.4 116 55.2
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 5.6e-32 141.0 68 83.8
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 7.4e-32 140.6 77 76.6
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 7.4e-32 140.6 107 57.0
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 1.6e-31 139.4 141 46.8
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 2.1e-31 139.0 65 81.5
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 2.1e-31 139.0 107 58.9
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 8.1e-31 137.1 116 55.2
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.8e-30 136.0 108 58.3
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 2.4e-30 135.6 109 54.1
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 2.4e-30 135.6 64 81.2
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 6.9e-30 134.0 65 87.7
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 9.0e-30 133.7 85 69.4
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 3.4e-29 131.7 91 61.5
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 3.4e-29 131.7 105 58.1
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 3.4e-29 131.7 116 52.6
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 4.5e-29 131.3 87 66.7
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 4.5e-29 131.3 87 66.7
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 9.3e-27 123.6 116 53.4
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 1.6e-26 122.9 111 52.3
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 2.7e-26 122.1 117 49.6
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 4.6e-26 121.3 81 64.2
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.3e-25 119.8 69 66.7
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.8e-25 119.4 81 64.2
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 3.0e-25 118.6 116 49.1
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 6.7e-25 117.5 69 66.7
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 1.5e-24 116.3 116 50.0
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 2.5e-24 115.5 118 50.0
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 3.3e-24 115.2 82 61.0
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 3.3e-24 115.2 82 61.0
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 3.3e-24 115.2 118 50.0
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 4.3e-24 114.8 91 57.1
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 5.6e-24 114.4 83 62.7
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 9.6e-24 113.6 70 62.9
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 1.6e-23 112.8 118 50.0
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 2.1e-23 112.5 118 50.8
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 2.8e-23 112.1 119 47.1
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 2.8e-23 112.1 63 74.6
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 6.2e-23 110.9 88 56.8
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 1.4e-22 109.8 84 58.3
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 2.4e-22 109.0 83 60.2
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 1.5e-21 106.3 82 59.8
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 1.5e-21 106.3 109 47.7
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 2.0e-21 105.9 119 45.4
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 2.0e-21 105.9 83 57.8
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 1.3e-20 103.2 92 46.7
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 1.7e-20 102.8 91 56.0
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 8.4e-20 100.5 57 63.2
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 1.1e-19 100.1 67 59.7
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 3.2e-19 98.6 59 69.5
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 3.2e-19 98.6 98 48.0
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 5.5e-19 97.8 108 47.2
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 1.2e-18 96.7 63 60.3
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 1.2e-18 96.7 105 44.8
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 6.7e-17 90.9 45 82.2
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 1.4e-14 83.2 98 37.8
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 5.3e-14 81.3 50 60.0
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 9.0e-14 80.5 44 65.9
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 2.1e-10 69.3 30 86.7
MBI16_g18203_MAGBIO Magnolia biondii HOM05D060951 ORTHO05D048599 1.0e-09 67.0 111 40.5
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 3.9e-09 65.1 36 75.0
Peaxi162Scf00213g00947 Petunia axillaris HOM05D007770 ORTHO05D009827 5.7e-08 61.2 85 36.5
Hund03265 Selenicereus undatus HOM05D060951 ORTHO05D048599 9.1e-06 53.9 110 34.5


User provided reference genes

Program Settings